Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 1.1e-156 556.6 282 100.0
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 1.4e-98 363.6 227 81.1
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.2e-70 270.8 231 62.3
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 6.6e-69 265.0 227 62.6
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 1.5e-68 263.8 227 61.2
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 1.5e-68 263.8 228 62.3
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 1.5e-68 263.8 227 60.8
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 1.9e-68 263.5 236 60.6
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 2.5e-68 263.1 228 61.8
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 9.5e-68 261.2 227 60.4
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.6e-67 260.4 227 61.7
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 3.6e-67 259.2 227 59.9
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 6.8e-66 255.0 225 60.4
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 2.2e-64 250.0 227 57.7
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 3.7e-64 249.2 235 57.4
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 1.4e-63 247.3 212 61.3
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 8.6e-61 238.0 229 58.5
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 1.6e-59 233.8 227 55.9
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 1.4e-58 230.7 239 53.6
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 1.4e-58 230.7 231 53.7
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 2.3e-58 229.9 216 57.4
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 6.8e-58 228.4 228 57.9
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 8.9e-58 228.0 226 54.9
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 2.0e-57 226.9 228 53.9
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 2.6e-57 226.5 229 55.5
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 4.4e-57 225.7 229 53.7
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 1.7e-56 223.8 235 54.9
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 2.2e-56 223.4 220 52.3
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 2.4e-55 219.9 228 54.4
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 4.1e-55 219.2 214 54.7
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 9.2e-55 218.0 220 55.5
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 1.6e-54 217.2 235 51.1
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 4.6e-54 215.7 231 51.9
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 1.0e-53 214.5 223 52.5
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 5.1e-53 212.2 229 52.0
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 3.3e-52 209.5 231 49.4
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 2.1e-51 206.8 252 49.2
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 3.6e-51 206.1 225 52.0
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 1.4e-50 204.1 237 49.4
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 2.3e-50 203.4 233 48.1
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 2.3e-50 203.4 223 47.5
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 3.1e-50 203.0 236 49.2
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 3.1e-50 203.0 226 47.3
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 4.0e-50 202.6 245 48.2
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 4.0e-50 202.6 252 47.6
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 5.2e-50 202.2 233 46.4
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 1.2e-49 201.1 233 47.6
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 1.2e-49 201.1 231 49.4
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 2.0e-49 200.3 229 48.5
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 2.0e-49 200.3 252 44.8
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 2.6e-49 199.9 233 47.2
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 3.4e-49 199.5 233 45.5
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 7.6e-49 198.4 229 48.0
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 7.6e-49 198.4 228 47.8
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 7.6e-49 198.4 233 46.8
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 9.9e-49 198.0 224 48.7
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 1.7e-48 197.2 245 44.9
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 1.7e-48 197.2 233 46.4
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 2.2e-48 196.8 224 48.7
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 4.9e-48 195.7 223 46.2
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 8.4e-48 194.9 224 48.2
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 1.1e-47 194.5 227 47.1
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 1.4e-47 194.1 232 45.7
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 4.6e-46 189.1 232 46.1
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 2.3e-45 186.8 240 44.2
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 1.1e-44 184.5 147 63.9
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 1.5e-44 184.1 237 47.3
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 1.5e-44 184.1 237 47.3
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 4.3e-44 182.6 224 46.0
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 9.6e-44 181.4 223 46.2
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 1.2e-43 181.0 219 46.6
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 4.7e-43 179.1 238 44.5
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 4.7e-43 179.1 215 48.4
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 1.4e-42 177.6 200 50.0
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 1.8e-42 177.2 208 48.1
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 8.9e-42 174.9 225 47.1
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 4.3e-36 156.0 224 41.1
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 7.3e-36 155.2 215 43.7
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 4.8e-35 152.5 212 42.9
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 3.4e-33 146.4 188 43.6
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 5.6e-28 129.0 114 55.3
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 1.8e-26 124.0 216 35.6
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 9.0e-26 121.7 210 35.7
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 1.6e-22 110.9 131 49.6
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 6.0e-22 109.0 111 55.0
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 5.1e-21 105.9 199 33.7
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 9.0e-18 95.1 129 45.0
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 6.5e-16 89.0 216 30.6
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 1.9e-15 87.4 215 30.2
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 2.5e-15 87.0 233 30.9
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 3.2e-15 86.7 217 29.5
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 3.2e-15 86.7 213 29.1
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 3.2e-15 86.7 213 29.1
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 7.1e-15 85.5 108 46.3
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 1.2e-14 84.7 206 30.1
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 1.2e-14 84.7 210 28.6
A03p53570 Brassica napus HOM05D006860 ORTHO05D028065 2.7e-14 83.6 214 30.4
BraA03t14423Z Brassica rapa HOM05D006860 ORTHO05D028065 4.6e-14 82.8 215 30.2
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 1.8e-13 80.9 213 29.6
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 2.3e-13 80.5 205 29.3
C07p51910 Brassica napus HOM05D006860 ORTHO05D028065 3.9e-13 79.7 215 29.8
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 3.3e-12 76.6 65 53.8
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 4.3e-12 76.3 52 67.3
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 4.3e-12 76.3 210 27.1
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 4.3e-12 76.3 209 28.2
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 7.4e-12 75.5 209 27.8
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 7.4e-12 75.5 77 50.6
BolC7t45690H Brassica oleracea HOM05D006860 ORTHO05D028065 9.6e-12 75.1 219 28.3
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 1.6e-11 74.3 209 28.2
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 2.1e-11 73.9 209 27.8
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 6.3e-11 72.4 209 27.8
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 1.8e-10 70.9 69 50.7
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 4.1e-10 69.7 73 50.7
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 1.5e-09 67.8 58 50.0
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 2.9e-08 63.5 60 53.3


User provided reference genes

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