Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 0.0e+00 1273.8 653 100.0
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 8.0e-195 684.5 708 56.6
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 2.8e-187 659.4 712 56.9
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 5.8e-185 651.7 680 59.4
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 9.9e-185 651.0 670 56.1
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 5.5e-143 512.3 725 46.9
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 5.3e-138 495.7 674 47.9
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 1.9e-111 407.5 724 39.8
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.3e-107 394.8 621 44.1
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 1.9e-103 380.9 620 43.9
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 2.7e-102 377.1 685 38.4
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 2.8e-99 367.1 730 37.8
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 8.3e-99 365.5 686 37.5
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.6e-97 361.3 718 36.8
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 7.7e-97 359.0 677 39.1
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 2.0e-89 334.3 645 37.8
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.0e-89 334.3 625 38.6
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.0e-88 332.0 631 38.2
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 1.3e-88 331.6 673 37.6
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.7e-88 331.3 616 38.5
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.5e-87 327.4 632 37.7
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 3.3e-87 327.0 659 36.7
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 6.1e-86 322.8 622 36.8
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 3.1e-85 320.5 632 37.3
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.0e-85 320.1 632 37.2
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.8e-85 319.3 630 37.6
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 2.0e-84 317.8 570 39.3
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 2.2e-83 314.3 625 37.3
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 3.7e-83 313.5 638 36.8
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 3.7e-83 313.5 581 39.1
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 4.9e-83 313.2 625 36.8
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.4e-82 310.8 632 36.9
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.0e-81 307.8 628 36.0
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 6.0e-81 306.2 625 36.3
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.3e-80 305.1 662 35.2
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.7e-80 304.7 672 34.4
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 3.3e-79 300.4 621 36.4
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 3.6e-78 297.0 630 35.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 4.0e-77 293.5 651 36.1
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.0e-76 291.2 627 35.7
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.9e-75 287.3 727 32.6
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 2.9e-75 287.3 620 35.3
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.9e-74 284.6 623 34.7
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 2.4e-74 284.3 621 34.5
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 2.4e-74 284.3 675 32.9
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.2e-73 282.0 661 35.9
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 2.1e-73 281.2 639 35.8
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.6e-73 280.0 631 34.5
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 7.8e-73 279.3 568 35.2
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.0e-72 277.3 621 34.0
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 6.6e-72 276.2 698 33.7
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 7.3e-71 272.7 728 31.7
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 4.7e-70 270.0 655 34.2
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 6.2e-70 269.6 653 34.3
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.2e-69 266.5 620 33.9
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 1.5e-68 265.0 600 34.0
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 3.4e-68 263.8 649 34.5
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 1.7e-67 261.5 761 30.6
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 6.4e-67 259.6 629 32.3
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 6.4e-67 259.6 626 35.3
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 1.9e-66 258.1 633 33.6
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 3.2e-66 257.3 685 32.0
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.2e-66 257.3 662 34.1
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.2e-66 257.3 672 34.2
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 7.1e-66 256.1 625 32.5
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.2e-65 255.4 625 32.5
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 3.9e-64 250.4 644 32.9
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.1e-64 250.0 828 29.3
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 1.1e-63 248.8 626 32.1
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.5e-63 248.4 608 33.6
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 4.3e-63 246.9 312 48.4
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 4.3e-63 246.9 673 33.1
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.6e-62 245.0 683 31.2
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.6e-62 243.8 584 33.4
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.5e-60 238.4 662 32.5
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 2.6e-60 237.7 573 34.6
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.6e-60 237.7 420 38.1
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.7e-59 235.0 600 33.3
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 2.2e-59 234.6 662 32.5
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.2e-59 234.6 667 30.9
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 4.9e-59 233.4 691 30.7
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 3.2e-58 230.7 648 33.3
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.0e-56 225.7 441 37.9
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 4.3e-55 220.3 695 32.8
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 2.1e-54 218.0 666 30.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.4e-52 210.3 456 35.3
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 7.6e-52 209.5 655 30.1
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 6.4e-51 206.5 702 30.9
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 7.1e-50 203.0 659 29.9
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 9.3e-50 202.6 608 30.9
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 6.0e-49 199.9 609 30.5
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 5.6e-47 193.4 641 29.8
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.3e-46 192.2 654 30.7
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 1.1e-45 189.1 672 30.8
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.7e-43 181.8 697 30.3
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 3.5e-41 174.1 698 29.4
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 3.0e-40 171.0 612 30.1
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 3.3e-39 167.5 498 31.3
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 3.1e-37 161.0 522 31.2
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 2.6e-36 157.9 502 31.5
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 4.5e-36 157.1 502 28.7
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 5.8e-36 156.8 503 30.4
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 2.2e-35 154.8 502 30.7
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.1e-34 152.5 570 28.8
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.1e-34 152.5 493 30.2
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.5e-34 151.4 493 30.2
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 2.5e-34 151.4 492 29.7
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 2.5e-34 151.4 492 29.9
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 3.2e-34 151.0 492 29.9
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 7.1e-34 149.8 502 30.9
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.6e-33 148.7 231 44.6
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 3.7e-30 137.5 510 29.4
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 2.4e-29 134.8 567 27.9
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 7.9e-25 119.8 279 35.1
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.5e-23 115.5 452 27.7
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 1.3e-19 102.4 606 24.9
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.7e-19 102.1 341 28.7
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 1.6e-17 95.5 286 32.5
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 2.8e-14 84.7 180 32.2
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 1.1e-10 72.8 315 27.3
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.1e-09 68.6 160 31.2
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.9e-08 64.3 211 28.9


User provided reference genes

Program Settings