Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13964 Vaccinium macrocarpon HOM05D000932 ORTHO05D000729 8.4e-160 567.0 293 100.0
Rhsim07G0088500 Rhododendron simsii HOM05D000932 ORTHO05D000729 5.2e-109 398.3 329 68.4
Hma1.2p1_1123F.1_g259400 Hydrangea macrophylla HOM05D000932 ORTHO05D000729 3.7e-83 312.4 329 55.0
Actinidia33741 Actinidia chinensis HOM05D000932 ORTHO05D000729 1.1e-82 310.8 330 58.8
Dinv38920 Davidia involucrata HOM05D000932 ORTHO05D000729 3.2e-82 309.3 329 56.2
CSS0007952 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 3.5e-81 305.8 337 57.6
Potri.003G130500 Populus trichocarpa HOM05D000932 ORTHO05D000729 9.2e-74 281.2 317 53.0
Sabra01G0076200 Salix brachista HOM05D000932 ORTHO05D000729 1.2e-65 254.2 317 47.9
Manes.01G060500 Manihot esculenta HOM05D000932 ORTHO05D000729 6.8e-61 238.4 327 45.0
Sabra03G0092800 Salix brachista HOM05D000932 ORTHO05D000729 1.5e-60 237.3 280 51.8
Hma1.2p1_0377F.1_g139450 Hydrangea macrophylla HOM05D000932 ORTHO05D000729 5.8e-60 235.3 288 49.3
Prupe.5G104100 Prunus persica HOM05D000932 ORTHO05D000729 9.9e-60 234.6 340 45.9
TWI60G0720 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 2.4e-58 229.9 328 47.9
Potri.001G101200 Populus trichocarpa HOM05D000932 ORTHO05D000729 2.7e-57 226.5 239 55.6
CiPaw.12G090900 Carya illinoinensis HOM05D000932 ORTHO05D000729 1.3e-56 224.2 339 44.2
Cc08_g15020 Coffea canephora HOM05D000932 ORTHO05D000729 6.6e-56 221.9 349 43.6
Atru.chr9.2152 Acer truncatum HOM05D000932 ORTHO05D000729 4.3e-55 219.2 305 48.5
Peaxi162Scf00074g02025 Petunia axillaris HOM05D000932 ORTHO05D000729 7.3e-55 218.4 323 44.9
Nitab4.5_0004114g0060 Nicotiana tabacum HOM05D000932 ORTHO05D000729 8.1e-54 214.9 335 43.9
Ciclev10021189m.g Citrus clementina HOM05D000932 ORTHO05D000729 1.1e-53 214.5 340 47.1
RcHm_v2.0_Chr7g0197051 Rosa chinensis HOM05D000932 ORTHO05D000729 9.0e-53 211.5 330 42.7
Cfa012201 Carpinus fangiana HOM05D000932 ORTHO05D000729 8.4e-51 204.9 311 43.7
QL12p032366 Quercus lobata HOM05D000932 ORTHO05D000729 1.4e-50 204.1 314 44.9
Haze_08815 Corylus avellana HOM05D000932 ORTHO05D000729 1.9e-50 203.8 281 46.3
TAR629G1819 Trochodendron aralioides HOM05D000932 ORTHO05D000729 9.3e-50 201.4 340 42.9
Lsat_1_v5_gn_6_85380 Lactuca sativa HOM05D000932 ORTHO05D000729 2.7e-49 199.9 333 44.1
MD06G1088000 Malus domestica HOM05D000932 ORTHO05D000729 3.3e-47 193.0 352 40.6
FAN19G0306 Fragaria x ananassa HOM05D000932 ORTHO05D000729 5.6e-47 192.2 348 39.9
Migut.A00747 Erythranthe guttata HOM05D000932 ORTHO05D000729 3.6e-46 189.5 332 42.5
FvH4_1g29660 Fragaria vesca HOM05D000932 ORTHO05D000729 3.6e-46 189.5 330 40.6
Lsat_1_v5_gn_6_4580 Lactuca sativa HOM05D000932 ORTHO05D000729 3.6e-46 189.5 335 41.2
Oeu059560.1 Olea europaea HOM05D000932 ORTHO05D000729 4.8e-46 189.1 334 42.2
MD14G1108900 Malus domestica HOM05D000932 ORTHO05D000729 1.1e-45 188.0 341 41.3
FAN23G0457 Fragaria x ananassa HOM05D000932 ORTHO05D000729 1.4e-45 187.6 331 40.2
HanXRQChr03g0085921 Helianthus annuus HOM05D000932 ORTHO05D000729 3.1e-45 186.4 339 42.8
FAN26G2342 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.4e-44 183.0 332 39.5
Thecc.03G282900 Theobroma cacao HOM05D000932 ORTHO05D000729 1.7e-43 180.6 282 43.3
Solyc08g081350.2 Solanum lycopersicum HOM05D000932 ORTHO05D000729 1.1e-42 177.9 315 42.5
Sopen08g029670 Solanum pennellii HOM05D000932 ORTHO05D000729 3.2e-42 176.4 272 46.0
CAN.G532.9 Capsicum annuum HOM05D000932 ORTHO05D000729 9.3e-42 174.9 309 42.7
Cpa.g.sc180.14 Carica papaya HOM05D000932 ORTHO05D000729 1.6e-41 174.1 289 43.6
FAN28G0866 Fragaria x ananassa HOM05D000932 ORTHO05D000729 1.0e-40 171.4 356 38.2
PGSC0003DMG400012193 Solanum tuberosum HOM05D000932 ORTHO05D000729 2.3e-40 170.2 316 42.1
Duzib205G0545 Durio zibethinus HOM05D000932 ORTHO05D000729 3.0e-40 169.9 286 40.9
ECA233G3587 Erigeron canadensis HOM05D000932 ORTHO05D000729 3.9e-40 169.5 324 41.7
Nitab4.5_0001522g0030 Nicotiana tabacum HOM05D000932 ORTHO05D000729 1.1e-39 167.9 245 46.1
MSTRG.11970 Avicennia marina HOM05D000932 ORTHO05D000729 1.9e-39 167.2 328 38.7
TAR636G0780 Trochodendron aralioides HOM05D000932 ORTHO05D000729 1.9e-39 167.2 307 40.7
HanXRQChr13g0394131 Helianthus annuus HOM05D000932 ORTHO05D000729 2.8e-38 163.3 295 39.3
Nn1g01593 Nelumbo nucifera HOM05D000932 ORTHO05D000729 6.2e-38 162.2 325 37.8
Hund11451 Selenicereus undatus HOM05D000932 ORTHO05D000729 8.1e-38 161.8 300 39.7
Lalb_Chr05g0224621 Lupinus albus HOM05D000932 ORTHO05D000729 3.1e-37 159.8 326 39.0
ECA240G4070 Erigeron canadensis HOM05D000932 ORTHO05D000729 2.0e-36 157.1 238 44.5
FvH4_5g02850 Fragaria vesca HOM05D000932 ORTHO05D000729 2.0e-36 157.1 295 37.3
Manes.02G021800 Manihot esculenta HOM05D000932 ORTHO05D000729 3.4e-36 156.4 292 38.7
Dinv37618 Davidia involucrata HOM05D000932 ORTHO05D000729 4.5e-36 156.0 331 36.6
Oeu061387.1 Olea europaea HOM05D000932 ORTHO05D000729 1.3e-35 154.5 308 40.3
DCAR_008365 Daucus carota HOM05D000932 ORTHO05D000729 1.7e-35 154.1 300 39.3
Phvul.002G291600 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 2.9e-35 153.3 321 38.6
Lj4g0000406 Lotus japonicus HOM05D000932 ORTHO05D000729 1.1e-34 151.4 331 37.5
Gohir.D09G186300 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.5e-34 150.2 306 38.9
Gohir.A09G192000 Gossypium hirsutum HOM05D000932 ORTHO05D000729 4.2e-34 149.4 306 38.9
Gorai.006G209000 Gossypium raimondii HOM05D000932 ORTHO05D000729 4.2e-34 149.4 306 38.9
Oeu007741.1 Olea europaea HOM05D000932 ORTHO05D000729 9.3e-34 148.3 332 37.3
Lj8A218T21 Lonicera japonica HOM05D000932 ORTHO05D000729 1.2e-33 147.9 239 45.6
GSVIVG01019393001 Vitis vinifera HOM05D000932 ORTHO05D000729 1.8e-32 144.1 236 41.9
DCAR_000626 Daucus carota HOM05D000932 ORTHO05D000729 3.9e-32 142.9 296 41.6
Duzib068G0955 Durio zibethinus HOM05D000932 ORTHO05D000729 5.1e-32 142.5 288 38.2
VMungo0251G0594 Vigna mungo HOM05D000932 ORTHO05D000729 5.1e-32 142.5 321 37.1
PGR042G2581 Punica granatum HOM05D000932 ORTHO05D000729 6.7e-32 142.1 341 38.7
Gorai.004G214000 Gossypium raimondii HOM05D000932 ORTHO05D000729 8.7e-32 141.7 289 40.5
EL10Ac5g12804 Beta vulgaris HOM05D000932 ORTHO05D000729 1.1e-31 141.4 372 34.7
Nn6g33335 Nelumbo nucifera HOM05D000932 ORTHO05D000729 2.5e-31 140.2 288 39.6
Gohir.D08G202600 Gossypium hirsutum HOM05D000932 ORTHO05D000729 5.7e-31 139.0 289 40.1
Gohir.A08G184100 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.6e-30 137.5 289 39.4
arahy.Tifrunner.gnm1.ann1.AGT1RS Arachis hypogaea HOM05D000932 ORTHO05D000729 3.7e-30 136.3 345 36.8
Glyma.05G209800 Glycine max HOM05D000932 ORTHO05D000729 5.3e-29 132.5 260 41.2
MD14G1109100 Malus domestica HOM05D000932 ORTHO05D000729 1.5e-28 131.0 188 45.7
arahy.Tifrunner.gnm1.ann1.BU1BMX Arachis hypogaea HOM05D000932 ORTHO05D000729 2.0e-28 130.6 346 35.8
FAN08G3463 Fragaria x ananassa HOM05D000932 ORTHO05D000729 4.5e-28 129.4 365 30.7
THA.LOC104817876 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 5.8e-28 129.0 297 36.4
Ah.07g196440 Amaranthus hybridus HOM05D000932 ORTHO05D000729 1.3e-27 127.9 296 36.5
CiPaw.11G132500 Carya illinoinensis HOM05D000932 ORTHO05D000729 2.9e-27 126.7 316 33.9
Eucgr.E00639 Eucalyptus grandis HOM05D000932 ORTHO05D000729 3.8e-27 126.3 344 34.3
LjContig00312_ERROPOS870357g0008521 Lotus japonicus HOM05D000932 ORTHO05D000729 1.1e-26 124.8 263 36.5
Sc22g0005470 Simmondsia chinensis HOM05D000932 ORTHO05D000729 7.1e-26 122.1 303 38.0
THA.LOC104809375 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 1.2e-25 121.3 309 35.6
TPR.G12941 Trifolium pratense HOM05D000932 ORTHO05D000729 1.2e-25 121.3 320 35.0
Psat7g031600 Pisum sativum HOM05D000932 ORTHO05D000729 3.0e-24 116.7 268 36.6
VMungo1215G1926 Vigna mungo HOM05D000932 ORTHO05D000729 5.1e-24 115.9 287 35.2
Glyma.08G016500 Glycine max HOM05D000932 ORTHO05D000729 1.1e-23 114.8 267 37.8
Phvul.002G158500 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 1.9e-23 114.0 290 33.8
Aa31LG2G990 Aethionema arabicum HOM05D000932 ORTHO05D000729 1.6e-22 110.9 262 37.8
Medtr8g098725 Medicago truncatula HOM05D000932 ORTHO05D000729 2.8e-22 110.2 285 34.7
MBI04_g00369_MAGBIO Magnolia biondii HOM05D000932 ORTHO05D000729 6.3e-22 109.0 311 32.5
ClCG01G002510 Citrullus lanatus HOM05D000932 ORTHO05D000729 1.4e-21 107.8 309 35.6
Glyma.01G221100 Glycine max HOM05D000932 ORTHO05D000729 4.1e-21 106.3 223 36.8
CsaV3_5G002610 Cucumis sativus L. HOM05D000932 ORTHO05D000729 9.0e-21 105.1 338 33.4
CARHR212950 Cardamine hirsuta HOM05D000932 ORTHO05D000729 7.7e-20 102.1 301 34.9
MBI04_g00371_MAGBIO Magnolia biondii HOM05D000932 ORTHO05D000729 2.2e-19 100.5 343 31.5
AL7G48040 Arabidopsis lyrata HOM05D000932 ORTHO05D000729 5.0e-19 99.4 257 37.7
Sp7g00570 Schrenkiella parvula HOM05D000932 ORTHO05D000729 6.5e-19 99.0 256 36.3
SpUn0010_0050 Schrenkiella parvula HOM05D000932 ORTHO05D000729 1.4e-18 97.8 256 36.3
Thhalv10028337m.g Eutrema salsugineum HOM05D000932 ORTHO05D000729 9.4e-18 95.1 310 33.9
Carub.0007s3410 Capsella rubella HOM05D000932 ORTHO05D000729 1.2e-17 94.7 244 38.5
Glyma.11G022600 Glycine max HOM05D000932 ORTHO05D000729 1.2e-17 94.7 220 35.0
AT5G41380 Arabidopsis thaliana HOM05D000932 ORTHO05D000729 1.6e-17 94.4 257 37.0
BolC6t37167H Brassica oleracea HOM05D000932 ORTHO05D000729 4.6e-17 92.8 302 33.8
PSO782G3796 Papaver somniferum HOM05D000932 ORTHO05D000729 4.6e-17 92.8 252 33.7
AT1G63820 Arabidopsis thaliana HOM05D000932 ORTHO05D000729 6.1e-17 92.4 254 35.8
BcaB06g27617 Brassica carinata HOM05D000932 ORTHO05D000729 1.4e-16 91.3 298 32.9
BcaC02g08961 Brassica carinata HOM05D000932 ORTHO05D000729 1.4e-16 91.3 256 34.8
C04p48430 Brassica napus HOM05D000932 ORTHO05D000729 1.4e-16 91.3 256 34.8
BolC4t26435H Brassica oleracea HOM05D000932 ORTHO05D000729 1.4e-16 91.3 256 34.8
A04p14510 Brassica napus HOM05D000932 ORTHO05D000729 1.8e-16 90.9 305 32.5
BraA04t17096Z Brassica rapa HOM05D000932 ORTHO05D000729 1.8e-16 90.9 305 32.5
CARHR047380 Cardamine hirsuta HOM05D000932 ORTHO05D000729 2.3e-16 90.5 259 33.2
TPR.G6694 Trifolium pratense HOM05D000604 ORTHO05D004512 3.9e-16 89.7 177 39.5
AL2G11320 Arabidopsis lyrata HOM05D000932 ORTHO05D000729 6.7e-16 89.0 254 34.6
Carub.0002s0103 Capsella rubella HOM05D000932 ORTHO05D000729 1.5e-15 87.8 296 31.8
BcaC08g44527 Brassica carinata HOM05D000932 ORTHO05D000729 3.3e-15 86.7 297 33.0
BcaB02g07895 Brassica carinata HOM05D000932 ORTHO05D000729 9.7e-15 85.1 193 38.9
C06p19800 Brassica napus HOM05D000932 ORTHO05D000729 1.7e-14 84.3 292 33.2
PSO478G4985 Papaver somniferum HOM05D000932 ORTHO05D000729 2.8e-14 83.6 274 32.1
Medtr5g010120 Medicago truncatula HOM05D000932 ORTHO05D000729 6.3e-14 82.4 229 31.4
BcaC04g22505 Brassica carinata HOM05D000932 ORTHO05D000729 1.1e-13 81.6 263 33.5
C09p18570 Brassica napus HOM05D000932 ORTHO05D000729 1.1e-13 81.6 263 33.5
BolC9t54753H Brassica oleracea HOM05D000932 ORTHO05D000729 1.1e-13 81.6 263 33.5
MELO3C005695.2 Cucumis melo HOM05D000932 ORTHO05D000729 1.1e-13 81.6 308 32.5
Sed0014817 Sechium edule HOM05D000932 ORTHO05D000729 1.4e-13 81.3 318 30.5
A09p15300 Brassica napus HOM05D000932 ORTHO05D000729 4.1e-13 79.7 264 31.4
BraA09t37175Z Brassica rapa HOM05D000932 ORTHO05D000729 4.1e-13 79.7 264 31.4
Sp2g00890 Schrenkiella parvula HOM05D000932 ORTHO05D000729 6.9e-13 79.0 268 34.3
BcaB07g31411 Brassica carinata HOM05D000932 ORTHO05D000729 2.0e-12 77.4 264 31.1
Ca_24547_v3 Cicer arietinum L. HOM05D000932 ORTHO05D000729 5.0e-11 72.8 197 32.0
Aqoxy4G03107 Aquilegia oxysepala HOM05D000932 ORTHO05D000729 1.4e-10 71.2 258 29.8
Thhalv10023638m.g Eutrema salsugineum HOM05D000932 ORTHO05D000729 3.2e-10 70.1 253 31.6
Oeu014306.1 Olea europaea HOM05D000932 ORTHO05D000729 9.4e-10 68.6 73 50.7
arahy.Tifrunner.gnm1.ann1.BXJN39 Arachis hypogaea HOM05D000932 ORTHO05D000729 2.7e-09 67.0 182 35.2
PGR031G0503 Punica granatum HOM05D000932 ORTHO05D000729 1.0e-08 65.1 228 32.9
SEGI_39721 Sequoiadendron giganteum HOM05D000932 ORTHO05D000729 1.0e-08 65.1 125 41.6
Sc07g0009830 Simmondsia chinensis HOM05D000932 ORTHO05D000729 1.4e-08 64.7 234 30.8
Gohir.A12G231000 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.8e-08 64.3 242 29.3
Gohir.D12G232100 Gossypium hirsutum HOM05D000932 ORTHO05D000729 1.8e-08 64.3 242 29.8
Medtr2g096080 Medicago truncatula HOM05D000932 ORTHO05D000729 1.8e-08 64.3 166 31.9
arahy.Tifrunner.gnm1.ann1.B2EAID Arachis hypogaea HOM05D000932 ORTHO05D000729 3.0e-08 63.5 182 34.6
Psat2g184400 Pisum sativum HOM05D000932 ORTHO05D000729 8.8e-08 62.0 144 35.4
Gorai.008G248400 Gossypium raimondii HOM05D000932 ORTHO05D000729 1.5e-07 61.2 242 28.9
QL01p034599 Quercus lobata HOM05D000932 ORTHO05D000729 2.0e-07 60.8 136 36.8
Sed0000359 Sechium edule HOM05D000932 ORTHO05D000729 2.6e-07 60.5 243 28.8
Psat5g282000 Pisum sativum HOM05D000932 ORTHO05D000729 5.7e-07 59.3 168 32.1
Glyma.15G219800 Glycine max HOM05D000932 ORTHO05D000729 7.4e-07 58.9 154 34.4
TAR374G0055 Trochodendron aralioides HOM05D000932 ORTHO05D000729 7.4e-07 58.9 68 44.1
Haze_23997 Corylus avellana HOM05D000932 ORTHO05D000729 9.7e-07 58.5 153 34.6
Aa31LG9G570 Aethionema arabicum HOM05D000932 ORTHO05D000729 1.7e-06 57.8 172 34.3
BcaB07g31549 Brassica carinata HOM05D000932 ORTHO05D000729 1.7e-06 57.8 264 28.0
Lalb_Chr03g0026971 Lupinus albus HOM05D000932 ORTHO05D000729 2.2e-06 57.4 149 32.2
Nitab4.5_0009199g0020 Nicotiana tabacum HOM05D000932 ORTHO05D000729 2.2e-06 57.4 183 32.2
CANSAT54G2797 Cannabis sativa HOM05D000932 ORTHO05D000729 2.8e-06 57.0 122 39.3
Hma1.2p1_0035F.1_g021790 Hydrangea macrophylla HOM05D000932 ORTHO05D000729 2.8e-06 57.0 131 37.4
PSO832G0188 Papaver somniferum HOM05D000932 ORTHO05D000729 3.7e-06 56.6 219 31.5


User provided reference genes

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