Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 6.7e-257 890.2 454 100.0
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.2e-189 666.8 455 78.7
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 5.3e-169 598.2 463 70.0
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 9.3e-166 587.4 444 70.9
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 7.6e-160 567.8 457 66.5
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 5.5e-158 561.6 459 64.9
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 2.3e-156 556.2 459 64.9
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 8.7e-156 554.3 458 64.2
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 8.7e-156 554.3 458 66.6
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 1.9e-155 553.1 456 65.1
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 8.2e-154 547.7 456 64.3
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 4.1e-153 545.4 455 63.3
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 1.5e-152 543.5 459 62.3
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 1.5e-152 543.5 463 63.1
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 4.5e-152 542.0 457 62.4
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 5.9e-152 541.6 455 62.9
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 5.9e-152 541.6 460 62.2
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 7.6e-152 541.2 458 63.1
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 3.8e-151 538.9 459 63.6
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 5.0e-151 538.5 458 63.1
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.1e-150 537.3 453 62.7
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 2.7e-149 532.7 459 61.9
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 3.6e-149 532.3 485 59.4
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 6.1e-149 531.6 457 62.6
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 1.4e-148 530.4 456 61.8
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 3.0e-148 529.3 459 59.7
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 5.1e-148 528.5 458 62.9
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 5.1e-148 528.5 471 60.9
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 6.7e-148 528.1 458 62.2
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 6.7e-148 528.1 445 63.8
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 1.1e-147 527.3 459 60.8
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 1.1e-147 527.3 476 60.1
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 1.1e-147 527.3 457 61.3
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 5.7e-147 525.0 460 61.5
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 7.4e-147 524.6 457 60.4
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 9.7e-147 524.2 476 59.7
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 1.3e-146 523.9 460 61.1
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 1.7e-146 523.5 436 63.8
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 2.2e-146 523.1 460 61.1
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 4.8e-146 521.9 457 60.4
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 8.2e-146 521.2 458 60.7
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 1.8e-145 520.0 457 60.8
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.4e-145 519.6 462 62.3
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 6.9e-145 518.1 458 61.4
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 6.9e-145 518.1 462 62.1
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 1.5e-144 516.9 460 60.4
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.6e-144 516.2 462 62.1
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 4.5e-144 515.4 457 60.0
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 8.5e-143 511.1 466 61.8
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 2.7e-141 506.1 455 59.1
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 1.0e-140 504.2 460 58.7
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 1.4e-140 503.8 447 60.4
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.3e-140 503.1 455 58.5
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 2.3e-140 503.1 461 59.4
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 3.0e-140 502.7 455 58.9
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 5.1e-140 501.9 455 59.1
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 1.1e-139 500.7 429 61.8
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 2.0e-139 500.0 458 58.1
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 2.6e-139 499.6 459 58.0
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 2.6e-139 499.6 528 53.6
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 2.6e-139 499.6 455 58.5
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 4.4e-139 498.8 442 60.4
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 5.7e-139 498.4 461 58.1
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 7.4e-139 498.0 457 59.3
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 7.4e-139 498.0 457 58.9
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 7.4e-139 498.0 457 59.3
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 1.7e-138 496.9 463 57.7
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 6.3e-138 495.0 456 59.2
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 1.8e-137 493.4 459 59.7
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.5e-136 490.3 458 58.5
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 4.5e-136 488.8 455 57.4
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.4e-134 483.8 439 58.8
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 9.4e-134 481.1 479 54.9
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 8.0e-133 478.0 340 72.1
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 1.5e-131 473.8 458 58.3
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 6.3e-130 468.4 459 54.9
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 2.4e-129 466.5 438 58.9
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 9.1e-129 464.5 470 55.7
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.2e-128 464.2 370 66.2
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.0e-127 461.1 458 55.0
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 3.2e-126 456.1 479 53.9
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 2.3e-124 449.9 419 60.1
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 5.2e-124 448.7 461 51.4
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 2.6e-123 446.4 458 54.4
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 2.8e-122 443.0 334 68.0
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 6.3e-122 441.8 440 55.9
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 1.2e-120 437.6 466 53.9
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 6.8e-116 421.8 382 59.9
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 1.5e-115 420.6 464 52.8
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 7.5e-115 418.3 343 65.0
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 6.3e-114 415.2 374 57.2
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 1.1e-113 414.5 387 59.2
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.0e-112 410.2 383 60.3
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 4.5e-112 409.1 437 54.2
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 5.5e-110 402.1 331 59.8
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 7.2e-110 401.7 437 53.5
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.0e-108 397.9 443 51.2
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 9.2e-105 384.8 458 49.6
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.0e-103 381.3 474 48.9
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 7.5e-99 365.2 275 69.5
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 2.2e-98 363.6 456 48.9
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 5.4e-97 359.0 486 43.8
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 2.4e-89 333.6 435 46.4
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 9.2e-89 331.6 458 42.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 2.5e-86 323.6 276 61.6
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 4.7e-85 319.3 424 46.5
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 4.4e-83 312.8 441 46.7
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 6.4e-82 308.9 466 41.4
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 6.6e-79 298.9 310 52.9
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 2.6e-75 287.0 310 50.6
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.7e-74 284.3 415 46.7
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 9.6e-70 268.5 291 50.9
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 1.2e-67 261.5 353 41.4
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 2.9e-66 256.9 295 51.9
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.0e-59 234.2 439 36.0
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 5.3e-44 183.0 725 24.0
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.1e-33 148.7 173 48.0
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 4.8e-29 133.3 146 54.1
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 8.2e-29 132.5 152 49.3
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 4.4e-22 110.2 66 74.2
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 3.1e-20 104.0 87 57.5
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 9.1e-20 102.4 64 81.2
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 5.9e-19 99.8 448 25.9
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.1e-17 95.5 44 95.5
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 2.1e-16 91.3 349 25.8
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 3.6e-16 90.5 83 56.6
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 1.0e-10 72.4 226 29.2
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 1.3e-10 72.0 47 74.5
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.1e-09 68.9 75 50.7
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 1.2e-08 65.5 40 72.5


User provided reference genes

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