Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 4.7e-101 371.3 202 100.0
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 9.1e-81 303.9 201 79.1
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 1.8e-73 279.6 200 74.5
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 1.2e-67 260.4 199 70.9
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 3.2e-65 252.3 200 71.0
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 1.5e-62 243.4 155 81.9
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 3.6e-61 238.8 200 67.0
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 3.4e-59 232.3 167 71.9
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 4.9e-58 228.4 146 78.8
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.4e-57 226.9 163 76.1
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 1.6e-56 223.4 167 71.3
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 2.7e-56 222.6 200 60.5
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 2.7e-56 222.6 188 64.9
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 4.6e-56 221.9 200 62.0
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 6.0e-56 221.5 199 62.8
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 6.0e-56 221.5 201 60.7
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 1.0e-55 220.7 166 70.5
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 1.0e-55 220.7 199 61.3
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 2.3e-55 219.5 136 80.9
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 3.0e-55 219.2 199 62.3
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 3.9e-55 218.8 158 70.3
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 3.9e-55 218.8 162 73.5
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 6.6e-55 218.0 199 62.3
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 8.6e-55 217.6 199 61.8
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 1.5e-54 216.9 198 61.6
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 1.5e-54 216.9 199 61.8
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 3.3e-54 215.7 183 66.1
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 4.3e-54 215.3 162 69.1
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 4.3e-54 215.3 201 63.2
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 5.6e-54 214.9 169 69.8
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 5.6e-54 214.9 167 71.9
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 7.3e-54 214.5 205 61.5
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 7.3e-54 214.5 201 62.7
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 7.3e-54 214.5 158 72.2
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 7.3e-54 214.5 170 70.0
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.6e-53 213.4 159 71.7
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 2.1e-53 213.0 139 75.5
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 3.6e-53 212.2 198 61.6
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 6.2e-53 211.5 204 57.4
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 1.1e-52 210.7 132 78.8
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 1.8e-52 209.9 154 73.4
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 2.3e-52 209.5 147 74.8
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 3.1e-52 209.1 145 72.4
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 3.1e-52 209.1 204 56.9
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 3.1e-52 209.1 149 75.8
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 4.0e-52 208.8 146 76.7
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 6.8e-52 208.0 149 73.8
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 8.9e-52 207.6 199 58.3
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 8.9e-52 207.6 210 57.1
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 1.5e-51 206.8 140 77.9
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 2.0e-51 206.5 166 68.1
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 2.0e-51 206.5 156 69.2
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 3.4e-51 205.7 152 72.4
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 3.4e-51 205.7 187 61.5
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.4e-51 205.7 200 59.0
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 3.4e-51 205.7 173 65.3
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 4.4e-51 205.3 200 58.5
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 4.4e-51 205.3 199 59.3
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 5.8e-51 204.9 180 62.8
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 7.6e-51 204.5 200 58.5
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 1.3e-50 203.8 163 68.1
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 1.7e-50 203.4 159 69.8
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.7e-50 203.4 200 58.5
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 1.7e-50 203.4 145 75.2
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 1.7e-50 203.4 136 78.7
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 2.2e-50 203.0 116 87.9
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.2e-50 203.0 200 58.0
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 6.4e-50 201.4 180 61.7
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.1e-49 200.7 148 71.6
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 1.4e-49 200.3 134 76.9
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.4e-49 200.3 169 65.7
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 1.9e-49 199.9 167 64.7
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 1.9e-49 199.9 140 75.0
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 3.2e-49 199.1 170 64.7
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 3.2e-49 199.1 145 71.7
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 3.2e-49 199.1 145 71.7
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 4.1e-49 198.7 130 80.0
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 5.4e-49 198.4 143 72.7
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.7e-48 196.1 132 80.3
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 7.8e-48 194.5 183 60.7
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 7.8e-48 194.5 165 64.2
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 7.8e-48 194.5 132 79.5
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 1.3e-47 193.7 124 79.0
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 2.3e-47 193.0 160 66.9
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 2.3e-47 193.0 142 71.1
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 3.9e-47 192.2 180 60.6
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 5.1e-47 191.8 152 69.1
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 6.6e-47 191.4 149 69.1
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 1.9e-46 189.9 128 78.9
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 2.5e-46 189.5 145 69.0
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 4.3e-46 188.7 122 81.1
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.2e-45 187.2 144 69.4
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 2.1e-45 186.4 199 58.3
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 3.6e-45 185.7 128 75.8
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 6.2e-45 184.9 135 73.3
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 8.1e-45 184.5 133 67.7
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 2.4e-44 183.0 141 64.5
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 1.2e-43 180.6 128 71.9
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 2.6e-43 179.5 170 61.8
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 2.2e-42 176.4 153 63.4
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 4.9e-42 175.3 114 78.9
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 2.1e-40 169.9 123 74.0
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.5e-38 163.7 142 63.4
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 9.9e-35 151.0 117 65.0
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 1.3e-34 150.6 156 55.8
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 1.1e-33 147.5 89 84.3
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 2.1e-32 143.3 123 64.2
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 3.9e-31 139.0 96 76.0
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 9.6e-30 134.4 130 57.7
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 8.1e-29 131.3 91 79.1
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 8.1e-29 131.3 106 67.9
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.1e-28 131.0 106 65.1
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 3.1e-28 129.4 103 67.0
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 3.1e-28 129.4 81 82.7
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 9.0e-28 127.9 69 91.3
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 3.8e-26 122.5 87 72.4
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 5.4e-25 118.6 68 83.8
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 1.8e-23 113.6 157 45.2
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 1.9e-22 110.2 63 85.7
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 8.1e-21 104.8 86 68.6
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 2.4e-20 103.2 101 63.4
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 1.7e-18 97.1 64 75.0
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 2.2e-18 96.7 68 69.1
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 8.4e-18 94.7 51 88.2
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 8.4e-18 94.7 94 56.4
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.3e-15 87.4 144 41.0
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.6e-13 80.5 99 45.5
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 1.1e-12 77.8 108 42.6
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 4.2e-09 65.9 80 51.2


User provided reference genes

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