Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 5.3e-278 960.3 457 100.0
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 1.8e-254 882.1 444 93.9
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 2.5e-251 871.7 457 89.3
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 2.5e-251 871.7 457 89.3
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 5.0e-244 847.4 438 90.6
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 7.0e-238 827.0 457 85.3
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 2.5e-235 818.5 457 83.6
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 1.7e-231 805.8 457 82.3
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 1.2e-229 799.7 448 84.6
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 1.5e-227 792.7 457 81.6
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 5.6e-227 790.8 457 80.3
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 3.6e-226 788.1 457 80.1
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 1.4e-225 786.2 460 80.9
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 1.4e-225 786.2 471 79.4
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 1.4e-225 786.2 457 79.6
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 1.8e-225 785.8 457 81.4
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 1.2e-224 783.1 457 79.6
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 3.4e-224 781.6 459 79.3
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 2.2e-223 778.9 457 80.1
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 3.7e-223 778.1 457 78.8
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 6.4e-223 777.3 464 79.1
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 5.4e-222 774.2 453 80.8
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 9.2e-222 773.5 457 78.6
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 4.6e-221 771.2 457 78.6
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 7.8e-221 770.4 453 79.5
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 3.9e-220 768.1 458 77.7
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 2.5e-219 765.4 458 79.3
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 9.5e-219 763.5 457 78.8
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 4.7e-218 761.1 458 77.1
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 1.8e-217 759.2 447 78.7
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 4.0e-217 758.1 459 78.2
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 8.9e-217 756.9 457 77.5
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 9.9e-216 753.4 461 76.6
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 1.3e-215 753.1 458 76.6
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 1.3e-215 753.1 458 76.6
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.4e-214 748.8 457 79.2
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 7.1e-214 747.3 457 78.1
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 4.6e-213 744.6 457 75.3
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 6.0e-213 744.2 457 75.9
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 8.6e-212 740.3 457 75.7
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 4.3e-211 738.0 457 76.4
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 9.6e-211 736.9 464 74.6
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 1.2e-210 736.5 467 76.2
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 2.1e-210 735.7 455 74.9
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 2.4e-209 732.3 446 76.7
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 3.4e-208 728.4 433 77.8
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 4.4e-208 728.0 450 75.6
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 2.2e-207 725.7 455 73.6
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 2.4e-206 722.2 457 73.3
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 7.8e-205 717.2 460 73.9
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.0e-204 716.8 460 73.9
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 1.0e-204 716.8 439 76.3
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 1.3e-204 716.5 426 78.9
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.5e-203 713.0 460 73.5
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 3.3e-203 711.8 466 72.7
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 4.3e-203 711.4 434 76.5
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 9.6e-203 710.3 436 75.9
Lj8C209T4 Lonicera japonica HOM05D004439 ORTHO05D005670 9.6e-203 710.3 394 82.5
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 2.8e-202 708.8 436 76.8
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 3.6e-202 708.4 437 76.7
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 4.8e-202 708.0 461 72.9
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 6.2e-202 707.6 454 73.6
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 8.1e-202 707.2 429 77.6
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 1.8e-201 706.1 426 77.2
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 2.4e-201 705.7 436 75.5
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 9.0e-201 703.7 467 72.2
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 1.2e-200 703.4 455 73.6
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 9.9e-200 700.3 457 72.0
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 6.4e-199 697.6 457 71.6
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 1.1e-198 696.8 457 71.1
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 4.2e-198 694.9 452 72.3
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 5.4e-198 694.5 475 70.5
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 9.3e-198 693.7 438 76.3
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 2.3e-196 689.1 451 73.2
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 2.5e-195 685.6 493 66.9
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 4.8e-194 681.4 467 70.9
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 4.8e-194 681.4 452 69.5
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 8.1e-194 680.6 408 77.5
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 3.2e-190 668.7 473 67.7
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 1.0e-188 663.7 488 67.8
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 1.1e-187 660.2 464 66.8
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 5.6e-187 657.9 458 67.2
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 9.6e-187 657.1 457 65.6
Lj8A194T41 Lonicera japonica HOM05D004439 ORTHO05D005670 2.1e-186 656.0 384 79.4
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 8.1e-186 654.1 458 66.4
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 5.3e-185 651.4 460 68.0
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 6.9e-185 651.0 459 66.2
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 4.5e-184 648.3 458 66.8
Rhsim09G0008900 Rhododendron simsii HOM05D004439 ORTHO05D005670 4.5e-184 648.3 473 69.1
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 1.7e-183 646.4 459 65.1
Gohir.A12G236000 Gossypium hirsutum HOM05D004439 ORTHO05D005670 2.2e-183 646.0 368 80.7
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 4.9e-183 644.8 395 75.7
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 1.1e-182 643.7 461 68.1
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 2.5e-182 642.5 462 65.4
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 2.5e-182 642.5 461 65.1
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 1.2e-181 640.2 454 67.2
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 2.1e-181 639.4 460 64.8
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 1.8e-180 636.3 462 64.7
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 1.8e-180 636.3 462 64.7
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 2.3e-180 636.0 463 64.8
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 6.7e-180 634.4 462 68.2
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 9.0e-177 624.0 462 63.9
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 3.8e-175 618.6 380 78.2
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 2.1e-173 612.8 540 59.1
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 1.3e-172 610.1 442 65.4
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.3e-172 610.1 443 67.9
Haze_08623 Corylus avellana HOM05D004439 ORTHO05D005670 7.4e-171 604.4 420 69.8
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 2.4e-169 599.4 469 60.3
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 8.8e-164 580.9 489 58.3
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 4.1e-161 572.0 426 64.6
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 9.1e-161 570.9 403 66.3
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 1.8e-156 556.6 444 59.5
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 4.4e-155 552.0 444 59.7
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 8.2e-154 547.7 435 57.9
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 1.2e-152 543.9 436 57.6
arahy.Tifrunner.gnm1.ann1.4X43I0 Arachis hypogaea HOM05D004439 ORTHO05D005670 6.7e-148 528.1 353 71.7
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 3.4e-139 499.2 436 57.8
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 1.3e-135 487.3 479 54.1
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 1.1e-134 484.2 456 58.1
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 2.5e-134 483.0 474 53.2
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 5.4e-129 465.3 290 76.2
Lj2A169G40 Lonicera japonica HOM05D004439 ORTHO05D005670 5.9e-128 461.8 332 67.8
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 2.8e-125 453.0 290 73.4
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.0e-124 451.1 347 62.8
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 2.0e-123 446.8 347 61.7
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 4.3e-118 429.1 418 56.2
MD14G1127500 Malus domestica HOM05D004439 ORTHO05D005670 1.2e-115 421.0 273 72.5
Cre07.g312350 Chlamydomonas reinhardtii HOM05D004439 ORTHO05D005670 2.1e-109 400.2 376 49.5
RcHm_v2.0_Chr6g0245381 Rosa chinensis HOM05D004439 ORTHO05D005670 6.4e-98 362.1 212 76.9
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 7.1e-97 358.6 428 43.5
PRCOL_00003494 Prasinoderma coloniale HOM05D004439 ORTHO05D005670 1.3e-95 354.4 438 42.7
RcHm_v2.0_Chr5g0068871 Rosa chinensis HOM05D004439 ORTHO05D005670 2.7e-88 330.1 277 61.4
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 2.0e-83 313.9 213 71.8
TPR.G191 Trifolium pratense HOM05D004439 ORTHO05D005670 3.2e-73 280.0 171 78.4
MELO3C027184.2 Cucumis melo HOM05D004439 ORTHO05D005670 6.1e-56 222.6 119 84.0
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 4.3e-54 216.5 230 57.0
SEGI_14966 Sequoiadendron giganteum HOM05D004439 ORTHO05D005670 7.4e-54 215.7 196 54.1
PSO063G0793 Papaver somniferum HOM05D004439 ORTHO05D005670 1.7e-53 214.5 182 58.2
MELO3C031246.2 Cucumis melo HOM05D004439 ORTHO05D005670 5.1e-47 193.0 157 61.8
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 4.1e-44 183.3 257 44.4
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.5e-43 181.4 255 44.3
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 1.2e-40 171.8 109 70.6
PGSC0003DMG400012290 Solanum tuberosum HOM05D004439 ORTHO05D005670 2.0e-38 164.5 234 39.3
Os05g0358200 Oryza sativa ssp. japonica HOM05D004439 ORTHO05D005670 1.4e-36 158.3 85 81.2
TPR.G9939 Trifolium pratense HOM05D004439 ORTHO05D005670 7.0e-36 156.0 206 44.7
TPR.G3794 Trifolium pratense HOM05D004439 ORTHO05D005670 1.1e-33 148.7 94 75.5
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.4e-31 141.7 255 38.8
Lj2A169G39 Lonicera japonica HOM05D004439 ORTHO05D005670 1.2e-27 128.6 71 80.3
MD06G1072700 Malus domestica HOM05D004439 ORTHO05D005670 1.8e-23 114.8 62 82.3
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 4.4e-22 110.2 85 61.2
SEGI_35904 Sequoiadendron giganteum HOM05D004439 ORTHO05D000007 7.7e-19 99.4 122 41.8
TPR.G22107 Trifolium pratense HOM05D004439 ORTHO05D005670 1.1e-17 95.5 70 67.1
Actinidia22721 Actinidia chinensis HOM05D004439 ORTHO05D057326 8.0e-16 89.4 64 73.4
Actinidia27323 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.3e-13 82.0 80 58.8
Actinidia27321 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.3e-10 71.2 42 73.8
Actinidia27324 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.3e-10 71.2 36 88.9
Ah.02g112160 Amaranthus hybridus HOM05D015883 ORTHO05D005553 1.2e-06 58.9 43 69.8


User provided reference genes

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