Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13881 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 4.7e-88 327.8 161 100.0
vmacro14893 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 2.6e-46 189.1 107 81.3
vmacro12890 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 8.7e-42 174.1 132 64.4
vmacro14894 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 4.0e-39 165.2 96 83.3
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 3.5e-35 152.1 136 57.4
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 2.3e-34 149.4 109 65.1
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 3.3e-33 145.6 104 65.4
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 2.2e-32 142.9 104 62.5
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 2.8e-32 142.5 103 61.2
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 4.8e-32 141.7 103 62.1
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 3.1e-31 139.0 103 61.2
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 3.1e-31 139.0 104 62.5
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 1.2e-30 137.1 102 61.8
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.2e-30 137.1 102 61.8
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.2e-30 137.1 102 61.8
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 1.5e-30 136.7 109 56.9
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 1.5e-30 136.7 103 61.2
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 2.6e-30 136.0 109 56.9
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 4.5e-30 135.2 101 61.4
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 5.9e-30 134.8 104 61.5
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 1.0e-29 134.0 103 61.2
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 1.0e-29 134.0 109 56.9
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.7e-29 133.3 103 61.2
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 2.2e-29 132.9 109 56.0
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 2.2e-29 132.9 105 59.0
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 2.9e-29 132.5 103 60.2
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 2.9e-29 132.5 109 56.9
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 3.8e-29 132.1 106 58.5
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 3.8e-29 132.1 103 61.2
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 5.0e-29 131.7 109 56.0
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 5.0e-29 131.7 109 56.0
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 5.0e-29 131.7 102 60.8
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 6.5e-29 131.3 102 58.8
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 8.5e-29 131.0 100 61.0
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 8.5e-29 131.0 109 56.9
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 1.1e-28 130.6 104 57.7
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.1e-28 130.6 105 58.1
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 1.4e-28 130.2 102 58.8
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.9e-28 129.8 109 56.0
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 1.9e-28 129.8 147 47.6
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 1.9e-28 129.8 103 55.3
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 2.5e-28 129.4 106 57.5
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 2.5e-28 129.4 153 47.1
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 2.5e-28 129.4 102 55.9
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 2.5e-28 129.4 119 54.6
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 3.2e-28 129.0 110 54.5
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 3.2e-28 129.0 110 54.5
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 4.2e-28 128.6 103 57.3
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 4.2e-28 128.6 104 57.7
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 5.5e-28 128.3 100 58.0
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 7.2e-28 127.9 109 55.0
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 9.3e-28 127.5 110 52.7
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 9.3e-28 127.5 103 58.3
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 9.3e-28 127.5 104 57.7
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 9.3e-28 127.5 96 62.5
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.2e-27 127.1 103 58.3
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 1.2e-27 127.1 104 58.7
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 1.2e-27 127.1 103 60.2
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.2e-27 127.1 103 60.2
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 1.2e-27 127.1 102 55.9
EL10Ac8g20632 Beta vulgaris HOM05D000219 ORTHO05D004649 2.7e-27 125.9 100 58.0
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 2.7e-27 125.9 170 44.1
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 3.6e-27 125.6 103 57.3
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 3.6e-27 125.6 103 58.3
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 3.6e-27 125.6 104 56.7
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 4.6e-27 125.2 102 55.9
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 4.6e-27 125.2 103 58.3
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 4.6e-27 125.2 103 57.3
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 4.6e-27 125.2 103 57.3
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 6.1e-27 124.8 103 55.3
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 6.1e-27 124.8 103 57.3
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 6.1e-27 124.8 103 57.3
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 6.1e-27 124.8 100 59.0
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 7.9e-27 124.4 110 51.8
Lsat_1_v5_gn_7_9060 Lactuca sativa HOM05D000219 ORTHO05D004649 1.0e-26 124.0 109 53.2
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 1.0e-26 124.0 104 53.8
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 1.3e-26 123.6 109 51.4
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.3e-26 123.6 102 54.9
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 1.3e-26 123.6 100 59.0
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 1.3e-26 123.6 102 54.9
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 1.8e-26 123.2 122 47.5
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 2.3e-26 122.9 102 57.8
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.0e-26 122.5 103 58.3
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 3.0e-26 122.5 103 56.3
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 3.0e-26 122.5 125 48.8
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 3.0e-26 122.5 109 51.4
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 3.9e-26 122.1 108 51.9
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 5.1e-26 121.7 100 58.0
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 6.7e-26 121.3 114 51.8
PGR102G3329 Punica granatum HOM05D000219 ORTHO05D004649 6.7e-26 121.3 103 52.4
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 8.8e-26 120.9 109 52.3
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 8.8e-26 120.9 170 42.9
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 1.9e-25 119.8 109 48.6
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 1.9e-25 119.8 103 52.4
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 2.5e-25 119.4 101 56.4
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 3.3e-25 119.0 103 57.3
SHI31711 Sapria himalayana HOM05D000219 ORTHO05D004649 3.3e-25 119.0 109 49.5
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 4.3e-25 118.6 101 55.4
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 4.3e-25 118.6 109 52.3
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 4.3e-25 118.6 102 55.9
CARHR125230 Cardamine hirsuta HOM05D000219 ORTHO05D004649 5.7e-25 118.2 103 52.4
Nitab4.5_0009050g0040 Nicotiana tabacum HOM05D000219 ORTHO05D004649 7.4e-25 117.9 106 55.7
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.7e-24 116.7 103 55.3
Nitab4.5_0000184g0150 Nicotiana tabacum HOM05D000219 ORTHO05D004649 2.8e-24 115.9 106 54.7
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 3.7e-24 115.5 100 52.0
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 6.3e-24 114.8 106 52.8
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 2.4e-23 112.8 106 50.9
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 2.4e-23 112.8 106 50.9
CAN.G1044.3 Capsicum annuum HOM05D000219 ORTHO05D004649 3.1e-23 112.5 106 50.9
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 3.1e-23 112.5 106 50.9
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 3.1e-23 112.5 109 48.6
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 1.2e-22 110.5 102 53.9
PGSC0003DMG402004545 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.5e-22 110.2 106 50.0
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 2.6e-22 109.4 90 54.4
Sc05g0007990 Simmondsia chinensis HOM05D000219 ORTHO05D004649 1.3e-21 107.1 104 50.0
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 3.8e-21 105.5 104 52.9
HanXRQChr10g0318981 Helianthus annuus HOM05D000219 ORTHO05D004649 3.2e-20 102.4 95 52.6
PGSC0003DMG400031193 Solanum tuberosum HOM05D000219 ORTHO05D004649 1.4e-18 97.1 92 50.0
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 2.0e-17 93.2 70 65.7
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 2.6e-17 92.8 70 65.7
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 3.3e-17 92.4 63 57.1
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.7e-16 90.1 80 53.8
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 3.1e-15 85.9 72 55.6
PSO063G1486 Papaver somniferum HOM05D000219 ORTHO05D004649 1.2e-14 84.0 70 57.1
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 1.2e-14 84.0 70 57.1
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 2.0e-14 83.2 70 60.0
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 7.7e-14 81.3 70 58.6
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 2.9e-13 79.3 70 57.1
ATR0322G032 Amborella trichopoda HOM05D000219 ORTHO05D004649 7.2e-12 74.7 70 50.0
Lj7A96T47 Lonicera japonica HOM05D000219 ORTHO05D004649 9.4e-12 74.3 55 61.8
HPP92_021538 Vanilla planifolia HOM05D000219 ORTHO05D004649 9.4e-12 74.3 70 51.4
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 9.4e-12 74.3 70 51.4
Mapoly0167s0023 Marchantia polymorpha HOM05D000219 ORTHO05D004649 2.3e-10 69.7 70 48.6
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 2.3e-10 69.7 70 54.3
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 1.1e-09 67.4 65 47.7
Glyma.16G117567 Glycine max HOM05D000219 ORTHO05D004649 1.5e-09 67.0 55 61.8
Lj7A96G45 Lonicera japonica HOM05D000219 ORTHO05D004649 2.6e-09 66.2 68 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3315 Anthoceros agrestis HOM05D000219 ORTHO05D004649 5.7e-09 65.1 72 44.4
HanXRQChr10g0319001 Helianthus annuus HOM05D000219 ORTHO05D004649 5.7e-09 65.1 70 50.0
vmacro20266 Vaccinium macrocarpon HOM05D000219 ORTHO05D004649 9.7e-09 64.3 38 78.9
AagrBONN_evm.TU.Sc2ySwM_117.2004 Anthoceros agrestis HOM05D000219 ORTHO05D004649 1.7e-08 63.5 72 43.1
Pp3c1_10760 Physcomitrium patens HOM05D000219 ORTHO05D004649 1.7e-08 63.5 70 42.9
Cre13.g581550 Chlamydomonas reinhardtii HOM05D000219 ORTHO05D004649 2.8e-08 62.8 71 40.8
Atru.chr10.1696 Acer truncatum HOM05D000219 ORTHO05D004649 3.7e-08 62.4 38 73.7
CBR_g11164 Chara braunii HOM05D000219 ORTHO05D004649 6.3e-08 61.6 68 42.6
RcHm_v2.0_Chr2g0117501 Rosa chinensis HOM05D000219 ORTHO05D004649 8.2e-08 61.2 70 50.0
Atru.chr10.1103 Acer truncatum HOM05D000219 ORTHO05D004649 2.4e-07 59.7 63 47.6
PRCOL_00002092 Prasinoderma coloniale HOM05D000219 ORTHO05D004649 3.1e-07 59.3 67 40.3
AUR62014746 Chenopodium quinoa HOM05D000219 ORTHO05D004649 4.1e-07 58.9 70 45.7
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 9.1e-07 57.8 71 42.3
CDE06G2407 Ceratophyllum demersum HOM05D000219 ORTHO05D004649 4.5e-06 55.5 36 66.7


User provided reference genes

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