Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.2e-71 273.1 135 100.0
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.2e-41 173.3 103 84.5
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 4.0e-16 88.6 67 68.7
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.3e-14 83.6 54 72.2
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 2.9e-14 82.4 70 60.0
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 3.8e-14 82.0 54 70.4
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 3.8e-14 82.0 53 73.6
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 6.4e-14 81.3 55 69.1
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 7.1e-13 77.8 54 72.2
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 1.6e-12 76.6 72 51.4
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 1.6e-12 76.6 54 68.5
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 2.7e-12 75.9 77 53.2
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 2.7e-12 75.9 54 63.0
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 3.5e-12 75.5 54 70.4
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 3.5e-12 75.5 67 58.2
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 3.5e-12 75.5 54 63.0
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 4.6e-12 75.1 55 61.8
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.0e-11 73.9 54 61.1
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 1.8e-11 73.2 54 63.0
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 1.8e-11 73.2 54 63.0
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 3.0e-11 72.4 54 61.1
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 5.1e-11 71.6 54 64.8
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 5.1e-11 71.6 54 57.4
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 6.7e-11 71.2 54 64.8
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 6.7e-11 71.2 54 61.1
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 6.7e-11 71.2 73 52.1
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 8.7e-11 70.9 54 59.3
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 8.7e-11 70.9 51 58.8
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.5e-10 70.1 57 59.6
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 1.9e-10 69.7 51 60.8
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 2.5e-10 69.3 54 61.1
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 5.6e-10 68.2 51 56.9
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 9.6e-10 67.4 51 60.8
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 9.6e-10 67.4 53 60.4
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 2.1e-09 66.2 51 62.7
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 2.1e-09 66.2 54 59.3
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 2.8e-09 65.9 66 51.5
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 2.8e-09 65.9 54 57.4
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 3.7e-09 65.5 51 58.8
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 4.8e-09 65.1 54 55.6
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 6.2e-09 64.7 56 53.6
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 1.1e-08 63.9 54 59.3
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.8e-08 63.2 54 50.0
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.8e-08 63.2 53 60.4
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 2.4e-08 62.8 51 52.9
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 2.4e-08 62.8 54 55.6
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 2.4e-08 62.8 54 59.3
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 3.1e-08 62.4 54 55.6
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 3.1e-08 62.4 53 58.5
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 6.9e-08 61.2 54 51.9
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 9.0e-08 60.8 54 50.0
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 1.2e-07 60.5 53 58.5
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 1.2e-07 60.5 54 50.0
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 1.5e-07 60.1 56 46.4
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 1.5e-07 60.1 54 55.6
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.5e-07 60.1 54 55.6
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 1.5e-07 60.1 53 56.6
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 3.4e-07 58.9 54 53.7
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 3.4e-07 58.9 51 51.0
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 4.5e-07 58.5 53 56.6
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 5.8e-07 58.2 53 56.6
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 7.6e-07 57.8 54 48.1
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 1.0e-06 57.4 54 48.1
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 1.7e-06 56.6 54 51.9
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 1.7e-06 56.6 51 52.9
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 2.2e-06 56.2 54 53.7
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 2.9e-06 55.8 51 52.9
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 2.9e-06 55.8 51 52.9
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 3.8e-06 55.5 53 54.7
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 3.8e-06 55.5 50 54.0
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 4.9e-06 55.1 51 52.9
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 8.4e-06 54.3 48 52.1


User provided reference genes

Program Settings