Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 3.7e-274 947.6 479 100.0
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 2.4e-236 822.0 487 85.2
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 1.1e-193 680.2 475 74.7
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 3.8e-178 628.6 511 64.4
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 6.4e-157 558.1 475 61.3
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 1.1e-156 557.4 475 62.7
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 4.3e-153 545.4 477 58.5
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 5.8e-150 535.0 475 58.3
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 3.3e-145 519.2 473 57.7
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 3.6e-144 515.8 477 57.4
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 1.4e-143 513.8 477 57.4
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 6.8e-143 511.5 476 56.1
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 6.8e-143 511.5 476 55.9
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.3e-141 507.3 478 53.8
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 3.8e-141 505.8 478 54.6
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 4.9e-141 505.4 478 55.0
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 8.4e-141 504.6 467 57.4
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 4.2e-140 502.3 477 53.9
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 7.8e-139 498.0 473 55.0
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.9e-137 493.4 494 53.8
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 3.3e-137 492.7 479 54.3
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 3.3e-137 492.7 466 55.2
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 7.3e-137 491.5 494 53.6
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 8.1e-136 488.0 469 55.2
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 1.1e-135 487.6 477 54.7
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 1.4e-135 487.3 480 54.2
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 2.6e-134 483.0 472 55.1
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 3.8e-133 479.2 478 54.2
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.1e-132 477.6 476 52.5
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 4.2e-132 475.7 475 54.1
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 1.0e-130 471.1 470 52.3
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 3.9e-130 469.2 481 50.1
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 1.1e-129 467.6 469 52.5
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.5e-129 467.2 475 51.4
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 1.5e-129 467.2 469 53.5
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.9e-129 466.8 475 52.6
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 3.3e-129 466.1 476 50.6
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 2.1e-128 463.4 485 52.0
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 2.1e-128 463.4 472 52.3
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 2.1e-128 463.4 474 52.3
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 1.1e-127 461.1 474 52.1
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.4e-127 460.7 469 51.8
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 1.4e-127 460.7 467 51.2
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 2.4e-127 459.9 468 50.6
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 3.4e-126 456.1 465 53.1
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 7.6e-126 454.9 483 51.1
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.7e-125 453.8 478 51.7
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.1e-124 451.1 461 52.9
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 1.9e-124 450.3 475 50.1
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 2.4e-124 449.9 478 49.8
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 3.2e-124 449.5 473 51.2
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 1.2e-123 447.6 487 49.9
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 3.5e-123 446.0 472 50.0
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 3.5e-123 446.0 477 50.7
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 4.6e-123 445.7 484 50.4
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 3.0e-122 443.0 478 49.6
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 1.1e-121 441.0 467 50.5
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 3.3e-121 439.5 464 50.9
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 4.3e-121 439.1 476 49.6
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 4.3e-121 439.1 464 50.9
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 1.6e-120 437.2 477 49.3
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 6.9e-119 431.8 474 48.1
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 2.6e-118 429.9 462 50.4
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 3.4e-118 429.5 471 47.8
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 7.6e-118 428.3 479 49.9
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 1.1e-116 424.5 480 48.8
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 4.2e-116 422.5 510 46.3
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 1.6e-115 420.6 466 48.7
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 3.5e-115 419.5 491 46.6
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 7.9e-115 418.3 489 46.6
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 2.5e-113 413.3 346 59.8
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.8e-112 409.8 410 55.1
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 1.4e-111 407.5 459 47.7
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 2.6e-110 403.3 466 49.4
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 1.3e-109 401.0 474 44.5
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 2.9e-109 399.8 496 43.8
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.6e-107 394.0 516 45.7
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 3.9e-106 389.4 475 44.2
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 8.7e-106 388.3 475 44.0
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 4.8e-104 382.5 331 56.8
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 3.1e-103 379.8 460 49.1
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 9.0e-103 378.3 429 46.9
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 4.5e-102 375.9 457 45.3
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 2.1e-99 367.1 478 43.5
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.7e-96 357.5 360 53.1
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 9.1e-95 351.7 334 54.5
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 5.0e-93 345.9 524 42.6
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 6.7e-90 335.5 333 52.6
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 2.7e-78 297.0 439 40.5
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 6.5e-77 292.4 265 55.8
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 9.4e-76 288.5 245 59.6
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 1.2e-73 281.6 246 59.3
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 3.8e-69 266.5 348 44.0
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 2.5e-68 263.8 247 55.9
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 3.4e-57 226.9 532 28.9
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 9.2e-55 218.8 559 27.7
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 6.6e-53 212.6 304 39.8
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.5e-52 211.5 485 31.5
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 4.0e-50 203.4 295 40.7
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 2.0e-49 201.1 464 30.4
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 2.6e-49 200.7 522 27.0
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 3.2e-47 193.7 474 27.8
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 7.0e-47 192.6 475 28.2
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 3.4e-41 173.7 154 57.1
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 1.4e-39 168.3 171 52.0
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 1.0e-37 162.2 151 54.3
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 8.4e-32 142.5 303 33.0
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 2.0e-25 121.3 214 41.1
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 2.6e-25 120.9 161 43.5
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-22 110.9 84 72.6
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 5.6e-20 103.2 244 32.0
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 2.9e-16 90.9 51 74.5
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.1e-11 74.7 68 45.6
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 1.1e-10 72.4 85 43.5
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.5e-09 68.6 72 48.6
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 7.1e-07 59.7 47 66.0


User provided reference genes

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