Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 2.9e-135 485.3 261 100.0
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 1.4e-102 376.7 242 85.5
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.6e-90 336.7 241 76.8
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 3.5e-85 318.9 241 75.1
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 7.9e-85 317.8 239 68.6
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 7.9e-85 317.8 239 73.6
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 7.9e-85 317.8 213 79.3
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 3.9e-84 315.5 241 72.2
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.9e-84 315.5 239 72.4
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 8.7e-84 314.3 240 71.2
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 3.3e-83 312.4 239 68.6
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.3e-83 312.0 239 74.5
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 5.7e-83 311.6 241 68.5
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 5.7e-83 311.6 245 72.7
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 1.3e-82 310.5 242 68.6
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.3e-82 310.5 244 70.9
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.6e-82 310.1 242 68.6
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 4.8e-82 308.5 200 76.5
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 2.4e-81 306.2 178 83.1
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 2.4e-81 306.2 234 70.1
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.4e-81 306.2 173 85.0
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 5.3e-81 305.1 241 72.2
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 9.0e-81 304.3 244 70.9
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.5e-80 303.5 239 68.6
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 3.4e-80 302.4 240 69.2
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 3.4e-80 302.4 241 71.4
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 4.5e-80 302.0 236 68.6
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 4.5e-80 302.0 242 66.9
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.3e-79 300.4 175 83.4
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.7e-79 300.1 241 68.0
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 1.7e-79 300.1 240 68.8
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 1.7e-79 300.1 239 68.2
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 2.2e-79 299.7 241 64.3
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 3.8e-79 298.9 239 67.8
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 3.8e-79 298.9 228 71.5
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 3.8e-79 298.9 242 70.2
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 5.0e-79 298.5 228 71.5
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 6.5e-79 298.1 226 73.0
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 8.5e-79 297.7 241 68.9
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 1.1e-78 297.4 241 69.7
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.4e-78 297.0 241 70.1
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 2.5e-78 296.2 211 75.4
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 4.2e-78 295.4 240 69.2
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 5.5e-78 295.0 248 69.8
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 7.2e-78 294.7 228 72.4
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 7.2e-78 294.7 239 67.4
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 9.4e-78 294.3 206 72.8
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 9.4e-78 294.3 178 80.3
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 2.7e-77 292.7 240 69.6
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 2.7e-77 292.7 239 69.0
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 4.6e-77 292.0 241 71.4
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 6.1e-77 291.6 245 63.3
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 7.9e-77 291.2 173 79.8
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.4e-76 290.4 239 70.3
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 2.3e-76 289.7 171 81.3
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 2.3e-76 289.7 178 79.2
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 3.0e-76 289.3 241 66.0
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 6.7e-76 288.1 244 62.3
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 6.7e-76 288.1 240 66.2
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 6.7e-76 288.1 165 80.6
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 8.8e-76 287.7 239 65.3
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 7.4e-75 284.6 166 81.3
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.7e-74 283.5 177 75.1
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.8e-74 282.7 239 67.4
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.8e-74 282.7 242 66.9
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.4e-73 280.4 245 63.3
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 2.4e-73 279.6 179 74.9
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 3.1e-73 279.3 242 68.2
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 5.3e-73 278.5 247 62.3
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 9.1e-73 277.7 225 64.4
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 9.1e-73 277.7 242 68.2
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 3.4e-72 275.8 241 63.9
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 5.9e-72 275.0 241 63.5
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 5.9e-72 275.0 225 64.0
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 7.7e-72 274.6 230 64.8
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.0e-71 274.2 239 66.5
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 2.9e-71 272.7 241 62.7
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 5.0e-71 271.9 241 63.1
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 5.0e-71 271.9 241 63.1
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 6.5e-71 271.6 176 75.6
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 8.5e-71 271.2 243 65.4
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 8.5e-71 271.2 243 65.4
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.1e-70 270.8 243 66.7
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.4e-70 270.4 237 65.8
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 2.5e-70 269.6 239 64.0
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 5.5e-70 268.5 242 62.8
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.0e-68 264.2 177 72.9
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 6.7e-68 261.5 239 61.1
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 6.3e-66 255.0 226 63.7
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 1.1e-65 254.2 174 73.0
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 4.1e-65 252.3 162 74.1
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 5.3e-65 251.9 237 58.6
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 7.0e-65 251.5 207 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 2.0e-64 250.0 174 66.7
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 1.3e-63 247.3 240 59.2
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 5.0e-63 245.4 146 80.1
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 3.2e-62 242.7 165 73.3
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 9.4e-62 241.1 201 72.1
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.6e-61 240.4 241 60.2
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.6e-61 240.4 241 60.2
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 7.5e-59 231.5 170 62.4
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 7.5e-59 231.5 170 62.4
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.4e-57 227.3 165 66.7
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 5.9e-56 221.9 134 78.4
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 7.7e-56 221.5 130 82.3
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 1.7e-55 220.3 179 59.8
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 2.9e-55 219.5 166 63.3
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 8.0e-53 211.5 171 57.9
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 8.8e-44 181.4 120 71.7
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.2e-43 181.0 124 73.4
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.2e-40 171.0 120 68.3
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 5.0e-39 165.6 105 80.0
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.0e-24 117.1 59 91.5
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 7.8e-24 115.2 214 35.5
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 2.3e-20 103.6 183 33.9
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 3.9e-15 86.3 175 36.6
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 1.3e-07 61.2 50 56.0
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 9.6e-06 55.1 147 25.9


User provided reference genes

Program Settings