Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 8.8e-67 256.9 138 100.0
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 8.5e-54 213.8 137 85.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.1e-48 195.3 140 80.7
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 5.9e-47 191.0 138 78.3
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 7.7e-47 190.7 138 77.5
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 2.2e-46 189.1 134 77.6
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 8.5e-46 187.2 126 82.5
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.9e-45 186.0 138 76.1
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 2.5e-45 185.7 138 76.1
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 9.4e-45 183.7 137 74.5
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.2e-44 183.3 134 76.1
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.6e-44 183.0 138 74.6
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.6e-44 183.0 134 75.4
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.1e-44 182.6 134 77.6
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.7e-44 182.2 121 82.6
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 3.6e-44 181.8 138 73.9
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 4.7e-44 181.4 137 70.8
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 4.7e-44 181.4 137 70.8
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 4.7e-44 181.4 127 80.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 6.1e-44 181.0 137 73.0
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.0e-43 180.3 134 74.6
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.0e-43 180.3 134 69.4
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.8e-43 179.5 136 73.5
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 4.0e-43 178.3 134 73.1
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 8.8e-43 177.2 134 68.7
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 8.8e-43 177.2 136 72.1
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 8.8e-43 177.2 125 75.2
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.2e-42 176.8 134 76.1
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.2e-42 176.8 136 72.8
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.2e-42 176.8 127 77.2
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.5e-42 176.4 126 77.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 2.0e-42 176.0 136 75.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 2.0e-42 176.0 125 73.6
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 2.0e-42 176.0 121 81.0
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 5.7e-42 174.5 136 70.6
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 7.5e-42 174.1 137 73.0
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.7e-41 172.9 130 72.3
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.2e-41 172.6 123 74.8
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 2.8e-41 172.2 136 72.1
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 3.7e-41 171.8 136 70.6
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 8.3e-41 170.6 126 73.8
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 8.3e-41 170.6 124 75.0
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.1e-40 170.2 119 75.6
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.4e-40 169.9 112 83.9
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 3.1e-40 168.7 117 76.1
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 3.1e-40 168.7 123 76.4
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 3.1e-40 168.7 124 75.8
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 4.1e-40 168.3 130 70.0
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.4e-40 167.9 114 78.9
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 7.0e-40 167.5 112 83.0
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 7.0e-40 167.5 116 80.2
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 7.0e-40 167.5 161 62.1
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 7.0e-40 167.5 118 78.8
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.2e-39 166.8 115 80.0
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.2e-39 166.8 115 80.0
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.2e-39 166.8 114 78.1
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.6e-39 166.4 109 80.7
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.6e-39 166.4 131 70.2
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 2.7e-39 165.6 128 71.9
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.7e-39 165.6 114 78.1
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 3.5e-39 165.2 144 64.6
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.5e-39 164.9 113 81.4
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 5.9e-39 164.5 117 76.1
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 5.9e-39 164.5 128 70.3
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.7e-38 162.9 138 68.1
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 2.2e-38 162.5 119 75.6
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 2.9e-38 162.2 120 75.8
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 3.8e-38 161.8 114 76.3
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 5.0e-38 161.4 113 77.0
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 5.0e-38 161.4 113 77.0
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 5.0e-38 161.4 115 77.4
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 6.5e-38 161.0 113 77.0
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 6.5e-38 161.0 113 77.0
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 6.5e-38 161.0 113 77.0
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 6.5e-38 161.0 116 75.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.5e-37 159.8 114 75.4
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 1.5e-37 159.8 113 76.1
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.5e-37 159.8 129 70.5
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 2.5e-37 159.1 127 70.9
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 7.2e-37 157.5 114 77.2
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 7.2e-37 157.5 113 76.1
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 9.4e-37 157.1 126 69.0
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 2.1e-36 156.0 138 68.1
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 2.7e-36 155.6 109 76.1
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 8.0e-36 154.1 134 64.2
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.0e-35 153.7 118 72.9
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 1.4e-35 153.3 119 70.6
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 6.8e-35 151.0 114 74.6
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.2e-34 150.2 115 73.0
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 1.4e-32 143.3 119 68.1
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 4.1e-32 141.7 104 75.0
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.0e-31 139.4 114 71.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 6.6e-30 134.4 119 59.7
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.9e-29 132.9 108 69.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 3.0e-27 125.6 95 74.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 4.0e-27 125.2 115 66.1
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 3.4e-26 122.1 105 62.9
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.2e-25 119.4 113 61.1
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.9e-25 119.0 109 63.3
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.3e-25 117.9 111 63.1
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.2e-23 113.6 74 82.4
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 2.0e-18 96.3 95 62.1
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 2.9e-17 92.4 66 71.2
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 1.9e-16 89.7 127 41.7
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 9.2e-16 87.4 114 46.5
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-15 85.1 108 39.8
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 5.6e-13 78.2 51 82.4
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 8.9e-11 70.9 55 69.1
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 8.6e-06 54.3 52 57.7


User provided reference genes

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