Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.1e-130 469.2 254 100.0
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 2.5e-75 286.2 171 90.6
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 7.5e-56 221.5 176 70.5
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 4.9e-55 218.8 161 75.8
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 2.7e-53 213.0 161 73.3
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 1.7e-52 210.3 160 77.5
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 3.0e-52 209.5 163 76.1
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 3.9e-52 209.1 161 76.4
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 3.9e-52 209.1 166 72.3
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 5.0e-52 208.8 167 70.1
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 8.6e-52 208.0 161 74.5
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.1e-51 207.6 151 77.5
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 1.1e-51 207.6 170 70.0
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.5e-51 207.2 174 69.0
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 1.5e-51 207.2 169 68.6
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 1.5e-51 207.2 169 69.2
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 4.3e-51 205.7 162 73.5
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 7.3e-51 204.9 164 70.1
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 1.2e-50 204.1 162 70.4
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 1.2e-50 204.1 164 67.7
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 2.1e-50 203.4 162 74.7
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 3.6e-50 202.6 170 68.2
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 8.0e-50 201.4 161 68.9
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 8.0e-50 201.4 161 68.9
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.4e-49 200.7 161 69.6
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.8e-49 200.3 162 68.5
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 2.3e-49 199.9 162 71.6
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 2.3e-49 199.9 166 69.9
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 4.0e-49 199.1 164 70.1
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 5.2e-49 198.7 160 71.9
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 2.0e-48 196.8 164 68.9
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 2.0e-48 196.8 164 68.3
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 2.6e-48 196.4 161 69.6
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 3.4e-48 196.1 170 66.5
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 9.8e-48 194.5 162 68.5
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 2.2e-47 193.4 163 71.2
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 2.2e-47 193.4 163 66.3
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 2.9e-47 193.0 162 68.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 6.4e-47 191.8 163 66.9
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 1.1e-46 191.0 164 68.9
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 1.1e-46 191.0 169 72.8
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 3.2e-46 189.5 167 66.5
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 3.2e-46 189.5 162 64.8
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 4.1e-46 189.1 163 73.6
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 5.4e-46 188.7 170 64.7
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 9.2e-46 188.0 169 66.9
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 9.2e-46 188.0 161 68.3
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 2.7e-45 186.4 164 70.1
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 4.6e-45 185.7 172 64.0
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 6.0e-45 185.3 162 70.4
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 6.0e-45 185.3 162 70.4
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 1.3e-44 184.1 161 70.2
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 3.0e-44 183.0 170 65.9
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 3.9e-44 182.6 166 65.1
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 6.6e-44 181.8 162 66.0
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 6.6e-44 181.8 171 66.1
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 8.6e-44 181.4 163 65.6
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 1.1e-43 181.0 170 64.7
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 3.3e-43 179.5 142 71.8
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 2.8e-42 176.4 158 67.7
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 6.2e-42 175.3 146 69.9
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 6.8e-41 171.8 154 66.2
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 5.8e-40 168.7 174 60.9
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 2.9e-39 166.4 153 64.7
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 3.7e-39 166.0 162 60.5
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 8.3e-39 164.9 175 61.1
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 1.9e-38 163.7 161 62.1
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 2.4e-38 163.3 176 60.2
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 4.1e-38 162.5 162 60.5
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 7.1e-38 161.8 174 60.3
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 1.2e-37 161.0 161 64.6
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.2e-37 161.0 161 62.7
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 2.3e-36 156.8 161 65.8
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 1.6e-34 150.6 132 67.4
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 2.1e-34 150.2 163 60.1
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 2.3e-33 146.7 174 56.9
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 7.6e-32 141.7 162 56.2
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 6.4e-31 138.7 188 51.6
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 1.1e-30 137.9 162 58.0
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 1.5e-27 127.5 168 52.4
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 4.2e-22 109.4 165 48.5
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 3.9e-20 102.8 171 48.0
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 1.5e-19 100.9 132 50.0
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 2.1e-13 80.5 88 51.1
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 3.3e-11 73.2 175 41.1
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 4.9e-07 59.3 37 83.8
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 4.9e-07 59.3 37 83.8


User provided reference genes

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