Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.0e-105 384.8 198 100.0
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.3e-43 178.7 98 86.7
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.8e-33 146.7 95 74.7
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 3.1e-33 146.0 95 75.8
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 5.3e-33 145.2 80 83.8
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 6.5e-31 138.3 108 63.0
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 2.5e-30 136.3 100 67.0
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 3.6e-29 132.5 99 65.7
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 4.7e-29 132.1 99 65.7
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 6.1e-29 131.7 100 69.0
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 1.0e-28 131.0 96 64.6
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 1.4e-28 130.6 91 69.2
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.8e-28 130.2 99 64.6
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.8e-28 130.2 99 63.6
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 3.0e-28 129.4 86 70.9
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.1e-27 127.5 97 66.0
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 1.5e-27 127.1 101 60.4
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 1.5e-27 127.1 88 67.0
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 2.6e-27 126.3 97 63.9
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 4.4e-27 125.6 93 63.4
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 4.4e-27 125.6 91 67.0
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 4.4e-27 125.6 80 70.0
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 5.7e-27 125.2 103 59.2
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 1.7e-26 123.6 90 65.6
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 2.8e-26 122.9 102 59.8
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 3.7e-26 122.5 96 62.5
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.7e-26 122.5 103 57.3
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 3.7e-26 122.5 94 63.8
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 4.8e-26 122.1 103 59.2
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 6.3e-26 121.7 77 71.4
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 8.2e-26 121.3 97 56.7
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.2e-26 121.3 79 72.2
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 8.2e-26 121.3 79 72.2
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 8.2e-26 121.3 97 58.8
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 1.4e-25 120.6 107 56.1
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 1.4e-25 120.6 107 56.1
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.8e-25 120.2 101 57.4
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 1.8e-25 120.2 92 63.0
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 2.4e-25 119.8 90 61.1
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 4.1e-25 119.0 97 59.8
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 7.0e-25 118.2 77 67.5
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 7.0e-25 118.2 77 67.5
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 9.1e-25 117.9 89 60.7
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 1.2e-24 117.5 75 74.7
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.2e-24 117.5 83 66.3
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 2.7e-24 116.3 82 65.9
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 4.5e-24 115.5 89 60.7
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 4.5e-24 115.5 98 56.1
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 7.7e-24 114.8 84 65.5
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 7.7e-24 114.8 84 65.5
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 7.7e-24 114.8 106 54.7
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 7.7e-24 114.8 92 60.9
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 1.0e-23 114.4 92 60.9
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 1.0e-23 114.4 92 59.8
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 1.0e-23 114.4 99 53.5
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 1.0e-23 114.4 92 59.8
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 1.0e-23 114.4 93 60.2
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.0e-23 114.4 89 60.7
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.0e-23 114.4 95 57.9
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 1.0e-23 114.4 96 54.2
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 1.3e-23 114.0 108 53.7
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.3e-23 114.0 96 57.3
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 1.3e-23 114.0 92 59.8
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 1.3e-23 114.0 97 56.7
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 1.3e-23 114.0 83 66.3
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 1.7e-23 113.6 109 53.2
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.7e-23 113.6 84 64.3
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 2.2e-23 113.2 99 57.6
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 2.2e-23 113.2 99 57.6
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 2.2e-23 113.2 99 57.6
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 2.2e-23 113.2 97 54.6
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.2e-23 113.2 102 54.9
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 2.2e-23 113.2 92 59.8
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 2.9e-23 112.8 85 60.0
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 2.9e-23 112.8 88 60.2
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 2.9e-23 112.8 98 59.2
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 2.9e-23 112.8 88 62.5
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 2.9e-23 112.8 91 60.4
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 2.9e-23 112.8 92 58.7
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 3.8e-23 112.5 92 57.6
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 3.8e-23 112.5 97 53.6
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 5.0e-23 112.1 81 65.4
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 5.0e-23 112.1 92 59.8
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 5.0e-23 112.1 97 54.6
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 5.0e-23 112.1 97 54.6
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 6.5e-23 111.7 67 71.6
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 8.5e-23 111.3 83 61.4
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 8.5e-23 111.3 96 59.4
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 1.1e-22 110.9 74 70.3
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.1e-22 110.9 75 66.7
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.1e-22 110.9 75 66.7
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 1.1e-22 110.9 88 60.2
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.5e-22 110.5 94 54.3
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 1.5e-22 110.5 89 61.8
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 3.2e-22 109.4 94 52.1
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 4.2e-22 109.0 97 50.5
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 4.2e-22 109.0 98 57.1
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 4.2e-22 109.0 73 67.1
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 4.2e-22 109.0 92 55.4
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 7.2e-22 108.2 97 55.7
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 1.6e-21 107.1 97 52.6
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 1.6e-21 107.1 100 58.0
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 2.1e-21 106.7 85 61.2
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 2.1e-21 106.7 89 57.3
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 2.1e-21 106.7 89 57.3
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 2.7e-21 106.3 91 57.1
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 2.7e-21 106.3 104 53.8
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 6.1e-21 105.1 70 68.6
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 8.0e-21 104.8 98 50.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 1.4e-20 104.0 100 53.0
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 1.8e-20 103.6 73 63.0
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 2.3e-20 103.2 100 51.0
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 6.8e-20 101.7 101 49.5
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 6.8e-20 101.7 90 52.2
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 2.6e-19 99.8 89 57.3
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 4.4e-19 99.0 83 54.2
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 9.8e-19 97.8 82 58.5
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 2.8e-18 96.3 84 54.8
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 1.1e-17 94.4 95 48.4
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 1.0e-15 87.8 59 66.1
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 1.0e-15 87.8 62 64.5
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 3.0e-12 76.3 65 49.2
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 6.8e-12 75.1 70 47.1
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 4.4e-11 72.4 63 46.0
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 2.2e-10 70.1 76 42.1
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 2.0e-08 63.5 79 35.4
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.7e-07 60.5 45 71.1
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 1.7e-07 60.5 39 74.4


User provided reference genes

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