Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 1.5e-112 409.5 195 100.0
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 6.4e-23 111.7 183 39.3
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 2.1e-21 106.7 55 76.4
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 3.5e-21 105.9 185 33.5
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 6.0e-21 105.1 191 36.6
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.3e-20 103.2 180 35.0
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 3.0e-20 102.8 186 36.0
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 3.9e-20 102.4 186 37.1
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 6.7e-20 101.7 184 35.3
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.9e-19 100.1 186 35.5
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 7.4e-19 98.2 55 67.3
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 9.6e-19 97.8 179 33.0
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 9.6e-19 97.8 153 37.9
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 1.6e-18 97.1 167 37.7
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 2.1e-18 96.7 190 32.1
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 2.8e-18 96.3 163 37.4
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 3.7e-18 95.9 153 37.3
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 4.8e-18 95.5 58 60.3
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 4.8e-18 95.5 63 61.9
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 8.1e-18 94.7 63 61.9
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 8.1e-18 94.7 63 61.9
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 8.1e-18 94.7 180 35.0
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 5.3e-17 92.0 163 37.4
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 1.2e-16 90.9 188 32.4
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 2.0e-16 90.1 187 33.2
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 4.5e-16 89.0 61 59.0
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 7.6e-16 88.2 180 31.7
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.3e-15 87.4 188 30.9
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 2.2e-15 86.7 175 32.0
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 2.9e-15 86.3 190 31.6
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 6.4e-15 85.1 61 55.7
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 1.1e-14 84.3 178 35.4
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.4e-14 84.0 52 61.5
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.4e-14 83.2 49 63.3
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 4.2e-14 82.4 190 30.5
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 7.1e-14 81.6 49 63.3
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 9.3e-14 81.3 176 33.5
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 1.0e-12 77.8 178 29.2
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 1.3e-12 77.4 188 30.9
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 2.3e-12 76.6 183 30.6
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 6.7e-12 75.1 175 30.3
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 6.7e-12 75.1 177 31.1
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 6.7e-12 75.1 166 30.7
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 2.5e-11 73.2 39 66.7
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 3.3e-11 72.8 192 30.7
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 9.6e-11 71.2 55 52.7
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 1.6e-10 70.5 46 56.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 2.1e-10 70.1 197 29.4
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 2.8e-10 69.7 182 29.1
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.8e-09 67.0 53 50.9
EL10Ac1g00699 Beta vulgaris HOM05D007737 ORTHO05D009754 3.1e-09 66.2 104 38.5
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 4.0e-09 65.9 177 28.8
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.5e-08 63.9 55 45.5
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 2.0e-08 63.5 167 30.5
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.4e-08 62.8 167 29.9
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 4.5e-08 62.4 182 26.9
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 5.8e-08 62.0 55 43.6
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 1.3e-07 60.8 61 45.9
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.3e-07 60.8 55 43.6
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 1.7e-07 60.5 163 29.4
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 4.2e-06 55.8 54 40.7


User provided reference genes

Program Settings