Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.4e-248 862.4 434 100.0
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.3e-166 589.3 396 80.1
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.5e-85 319.3 202 78.7
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.8e-56 221.9 323 43.0
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-54 217.2 330 44.5
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 7.8e-45 185.7 309 38.5
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.7e-44 184.5 368 37.0
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-43 181.4 423 34.5
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.5e-43 181.4 389 35.5
Rhsim06G0049000 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.3e-30 135.6 329 36.2
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.1e-28 129.8 290 32.1
Rhsim05G0127300 Rhododendron simsii HOM05D024557 ORTHO05D010234 4.3e-27 126.7 237 35.0
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.9e-24 115.5 179 40.2
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.5e-21 107.1 335 27.5
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.0e-20 105.5 335 27.5
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.3e-20 104.4 335 27.2
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.0e-20 104.0 335 27.2
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.9e-20 103.6 349 26.9
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-20 103.2 335 27.5
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.3e-19 100.1 334 27.2
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.3e-19 100.1 193 37.8
Rhsim06G0048900 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.3e-19 100.1 319 32.6
CSS0041515 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.1e-18 97.8 208 35.1
CSS0040020 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.6e-18 97.1 226 34.1
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 3.6e-18 97.1 340 27.1
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.8e-18 96.7 322 27.0
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.2e-18 96.3 328 26.5
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.1e-18 95.9 284 27.8
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.4e-17 95.1 182 35.7
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 1.4e-17 95.1 111 49.5
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.4e-17 94.4 279 27.6
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-17 93.6 296 30.7
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.9e-17 92.8 187 35.3
CSS0017527 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.5e-16 91.7 214 33.6
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.6e-16 90.9 195 34.9
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.6e-16 90.9 195 34.9
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.6e-16 90.9 195 34.9
CSS0001367 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 7.6e-16 89.4 226 33.2
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 7.6e-16 89.4 211 33.2
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.7e-15 88.2 245 27.3
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 1.7e-15 88.2 285 30.5
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.9e-15 87.4 149 38.9
Rhsim10G0179100 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.4e-14 85.1 111 43.2
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.9e-14 84.7 202 33.2
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-14 84.3 154 37.7
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 3.2e-14 84.0 280 26.1
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.5e-14 83.2 310 25.8
RhsimUnG0134700 Rhododendron simsii HOM05D024557 ORTHO05D010234 1.6e-13 81.6 72 59.7
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.1e-13 81.3 274 27.7
RhsimUnG0063900 Rhododendron simsii HOM05D024557 ORTHO05D010234 4.6e-13 80.1 72 58.3
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 6.0e-13 79.7 186 33.3
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.3e-12 77.8 323 23.8
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 1.5e-11 75.1 312 24.4
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-11 74.7 372 24.2
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.6e-11 73.2 331 24.2
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 2.1e-10 71.2 275 26.5
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 3.7e-10 70.5 332 24.4
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 8.1e-10 69.3 359 23.7
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.3e-09 66.6 306 24.2
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 5.3e-09 66.6 333 24.9
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 9.0e-09 65.9 306 24.5
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 9.0e-09 65.9 301 23.3
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 1.5e-08 65.1 290 22.8
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.6e-08 64.3 143 32.2
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.4e-08 63.9 96 34.4
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.8e-08 63.2 178 28.1
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.8e-08 63.2 178 28.1
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 7.6e-08 62.8 131 32.8
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.7e-07 61.6 178 27.5
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 2.2e-07 61.2 309 27.2
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.8e-07 60.5 190 26.8
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-07 60.5 180 27.8
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.9e-07 60.1 178 27.0
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 8.4e-07 59.3 300 22.7
CSS0048637 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 1.1e-06 58.9 72 41.7
TWI23G0253 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.1e-06 58.9 270 24.8
CSS0002056 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 2.5e-06 57.8 72 38.9
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.5e-06 57.8 261 26.4
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 3.2e-06 57.4 280 24.6
CSS0015286 Camellia sinensis var. sinensis HOM05D014646 ORTHO05D010234 4.2e-06 57.0 74 41.9
Peaxi162Scf00131g00120 Petunia axillaris HOM05D003120 ORTHO05D003568 5.5e-06 56.6 325 23.7
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 5.5e-06 56.6 293 21.5
CSS0009398 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 7.1e-06 56.2 80 37.5
CSS0019606 Camellia sinensis var. sinensis HOM05D021745 ORTHO05D010234 9.3e-06 55.8 80 37.5
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 9.3e-06 55.8 293 21.5
vmacro00395 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.3e-06 55.8 59 54.2


User provided reference genes

Program Settings