Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 6.5e-188 660.6 343 100.0
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.6e-157 559.7 288 99.0
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 2.8e-82 309.7 339 58.4
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 2.2e-66 256.9 337 49.3
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.0e-59 233.8 197 64.0
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 4.4e-59 232.6 320 49.7
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 2.5e-54 216.9 345 44.9
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 8.0e-53 211.8 283 48.8
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.4e-52 211.1 334 44.6
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 4.0e-52 209.5 331 45.3
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 4.4e-51 206.1 342 42.4
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 9.8e-51 204.9 302 45.7
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 6.4e-50 202.2 345 43.8
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 3.2e-49 199.9 338 44.4
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 9.2e-49 198.4 356 42.1
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 9.2e-49 198.4 170 63.5
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 2.0e-48 197.2 298 45.0
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.0e-48 197.2 352 40.6
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 6.0e-48 195.7 345 40.6
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 1.9e-46 190.7 343 42.3
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 1.4e-44 184.5 310 44.5
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 3.1e-44 183.3 321 41.4
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 5.2e-44 182.6 305 43.9
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 6.8e-44 182.2 305 44.3
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 1.5e-43 181.0 355 38.9
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 2.6e-43 180.3 297 41.8
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 9.8e-43 178.3 333 39.9
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 2.2e-42 177.2 332 39.8
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 3.7e-42 176.4 307 40.1
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 6.4e-42 175.6 334 40.1
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 1.4e-41 174.5 312 40.4
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 1.4e-41 174.5 327 41.3
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 1.9e-41 174.1 335 39.7
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 2.4e-41 173.7 169 52.1
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 5.4e-41 172.6 333 38.4
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 9.2e-41 171.8 332 40.7
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.2e-40 171.4 341 40.5
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 1.6e-40 171.0 337 39.8
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 2.1e-40 170.6 332 40.4
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 2.7e-40 170.2 340 38.5
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 6.0e-40 169.1 332 38.0
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 1.0e-39 168.3 334 37.7
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 1.7e-39 167.5 332 40.7
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 2.3e-39 167.2 308 41.9
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 3.0e-39 166.8 322 39.8
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 8.6e-39 165.2 338 39.9
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 8.6e-39 165.2 362 36.7
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 8.6e-39 165.2 321 39.3
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 5.6e-38 162.5 338 38.2
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.6e-37 161.0 334 37.1
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 4.7e-37 159.5 338 38.5
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.4e-36 157.9 346 39.0
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.4e-36 157.9 161 54.0
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 1.4e-36 157.9 332 38.0
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 1.4e-36 157.9 320 37.8
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 2.3e-36 157.1 325 37.5
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 4.0e-36 156.4 318 39.9
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 5.2e-36 156.0 299 39.8
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 6.8e-36 155.6 338 38.5
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 2.6e-35 153.7 370 35.7
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 3.4e-35 153.3 324 37.3
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.4e-35 153.3 345 38.3
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 9.9e-35 151.8 336 36.6
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.3e-34 151.4 331 36.0
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.9e-34 150.2 349 33.8
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 4.9e-34 149.4 348 33.6
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.9e-34 149.4 346 37.3
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 6.4e-34 149.1 304 38.8
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 8.3e-34 148.7 334 37.1
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 2.4e-33 147.1 331 38.1
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 5.4e-33 146.0 160 51.2
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 5.4e-33 146.0 300 39.3
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 5.4e-33 146.0 297 39.1
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 7.1e-33 145.6 428 32.2
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 9.2e-33 145.2 305 40.0
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.6e-32 144.4 313 36.4
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 5.1e-31 139.4 341 37.2
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 3.3e-30 136.7 327 35.5
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 2.8e-29 133.7 163 46.0
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 1.1e-28 131.7 332 36.1
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 1.8e-28 131.0 303 35.6
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 4.0e-28 129.8 321 33.3
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 6.8e-28 129.0 352 32.1
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 8.9e-28 128.6 302 35.1
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.2e-27 128.3 403 32.0
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 4.4e-27 126.3 143 44.1
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 4.9e-26 122.9 78 69.2
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 8.4e-26 122.1 320 30.3
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 1.4e-25 121.3 330 36.4
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 1.9e-25 120.9 338 33.4
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 6.0e-24 115.9 300 34.7
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 3.0e-23 113.6 100 51.0
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 3.0e-23 113.6 100 51.0
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 3.9e-23 113.2 320 32.2
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 3.6e-21 106.7 170 42.4
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 1.5e-19 101.3 315 30.5
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 7.6e-19 99.0 58 72.4
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 3.8e-18 96.7 326 28.5
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 3.8e-18 96.7 326 28.5
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 1.6e-16 91.3 266 36.1
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 7.9e-16 89.0 326 27.9
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 2.8e-13 80.5 173 32.4
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 1.1e-12 78.6 314 27.4
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 6.9e-12 75.9 58 53.4
Actinidia12185 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.4e-09 68.2 121 52.1
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 4.2e-09 66.6 156 31.4
Lj7P535T24 Lonicera japonica HOM05D007090 ORTHO05D008993 7.9e-08 62.4 85 54.1
SMO171G0115 Selaginella moellendorffii HOM05D000227 ORTHO05D004725 1.1e-06 58.5 64 45.3
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.5e-06 58.2 43 55.8


User provided reference genes

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