Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13396 Vaccinium macrocarpon HOM05D006451 ORTHO05D007680 8.2e-224 780.0 381 100.0
CSS0023735 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 1.5e-12 78.2 49 79.6
vmacro15365 Vaccinium macrocarpon HOM05D006451 ORTHO05D007680 1.0e-11 75.5 49 77.6
Haze_11222 Corylus avellana HOM05D006451 ORTHO05D007680 1.3e-11 75.1 86 46.5
QL06p001354 Quercus lobata HOM05D006451 ORTHO05D007680 5.0e-11 73.2 46 78.3
Atru.chr4.2375 Acer truncatum HOM05D006451 ORTHO05D007680 6.5e-11 72.8 49 69.4
Atru.chr4.2399 Acer truncatum HOM05D006451 ORTHO05D007680 6.5e-11 72.8 49 69.4
Ciclev10005444m.g Citrus clementina HOM05D006451 ORTHO05D007680 8.4e-11 72.4 46 73.9
Gorai.002G024400 Gossypium raimondii HOM05D006451 ORTHO05D007680 1.1e-10 72.0 51 68.6
Cfa008457 Carpinus fangiana HOM05D006451 ORTHO05D007680 1.9e-10 71.2 49 71.4
Gohir.D01G021900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 2.5e-10 70.9 51 66.7
Medtr1g041435 Medicago truncatula HOM05D006451 ORTHO05D007680 2.5e-10 70.9 40 80.0
Carub.0001s0338 Capsella rubella HOM05D006451 ORTHO05D007680 3.2e-10 70.5 46 71.7
Ca_12151_v3 Cicer arietinum L. HOM05D006451 ORTHO05D007680 3.2e-10 70.5 47 72.3
Rhsim02G0028200 Rhododendron simsii HOM05D006451 ORTHO05D007680 3.2e-10 70.5 46 76.1
Sp1g03010 Schrenkiella parvula HOM05D006451 ORTHO05D007680 3.2e-10 70.5 46 73.9
Actinidia08470 Actinidia chinensis HOM05D006451 ORTHO05D007680 4.2e-10 70.1 49 69.4
AT1G04190 Arabidopsis thaliana HOM05D006451 ORTHO05D007680 4.2e-10 70.1 46 71.7
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 4.2e-10 70.1 49 71.4
COL.COLO4_21546 Corchorus olitorius HOM05D006451 ORTHO05D007680 4.2e-10 70.1 46 73.9
Duzib151G0283 Durio zibethinus HOM05D006451 ORTHO05D007680 4.2e-10 70.1 46 73.9
Oeu058962.1 Olea europaea HOM05D006451 ORTHO05D007680 4.2e-10 70.1 42 81.0
A08p37070 Brassica napus HOM05D006451 ORTHO05D007680 5.5e-10 69.7 49 69.4
BraA08t35607Z Brassica rapa HOM05D006451 ORTHO05D007680 5.5e-10 69.7 49 69.4
Haze_11218 Corylus avellana HOM05D006451 ORTHO05D007680 5.5e-10 69.7 56 60.7
Gohir.A01G023900 Gossypium hirsutum HOM05D006451 ORTHO05D007680 5.5e-10 69.7 46 71.7
TPR.G25159 Trifolium pratense HOM05D006451 ORTHO05D007680 7.2e-10 69.3 40 77.5
PGSC0003DMG402007686 Solanum tuberosum HOM05D006451 ORTHO05D007680 9.3e-10 68.9 49 69.4
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 1.2e-09 68.6 49 69.4
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 1.2e-09 68.6 49 69.4
Peaxi162Scf00520g00039 Petunia axillaris HOM05D006451 ORTHO05D007680 1.2e-09 68.6 49 67.3
Psat6g104120 Pisum sativum HOM05D006451 ORTHO05D007680 1.2e-09 68.6 40 80.0
Dinv44567 Davidia involucrata HOM05D006451 ORTHO05D007680 1.6e-09 68.2 49 71.4
Manes.15G032000 Manihot esculenta HOM05D006451 ORTHO05D007680 1.6e-09 68.2 49 69.4
AL1G13790 Arabidopsis lyrata HOM05D006451 ORTHO05D007680 2.1e-09 67.8 46 69.6
CARHR003520 Cardamine hirsuta HOM05D006451 ORTHO05D007680 2.1e-09 67.8 46 67.4
MELO3C014291.2 Cucumis melo HOM05D006451 ORTHO05D007680 2.7e-09 67.4 49 65.3
CsaV3_2G013500 Cucumis sativus L. HOM05D006451 ORTHO05D007680 2.7e-09 67.4 49 65.3
Duzib052G1229 Durio zibethinus HOM05D006451 ORTHO05D007680 2.7e-09 67.4 46 69.6
Lj6A610G48 Lonicera japonica HOM05D006451 ORTHO05D007680 2.7e-09 67.4 46 73.9
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 2.7e-09 67.4 44 68.2
CAN.G1402.12 Capsicum annuum HOM05D006451 ORTHO05D007680 3.5e-09 67.0 49 67.3
Glyma.10G003800 Glycine max HOM05D006451 ORTHO05D007680 3.5e-09 67.0 49 65.3
TAR362G1293 Trochodendron aralioides HOM05D006451 ORTHO05D007680 3.5e-09 67.0 46 67.4
Aa31LG1G20650 Aethionema arabicum HOM05D006451 ORTHO05D007680 4.6e-09 66.6 46 67.4
Sopen09g031400 Solanum pennellii HOM05D006451 ORTHO05D007680 4.6e-09 66.6 49 67.3
arahy.Tifrunner.gnm1.ann1.9LTU7I Arachis hypogaea HOM05D006451 ORTHO05D007680 6.1e-09 66.2 42 71.4
arahy.Tifrunner.gnm1.ann1.D3KIH0 Arachis hypogaea HOM05D006451 ORTHO05D007680 6.1e-09 66.2 42 71.4
arahy.Tifrunner.gnm1.ann1.E7JLC4 Arachis hypogaea HOM05D006451 ORTHO05D007680 6.1e-09 66.2 42 71.4
Thecc.04G237100 Theobroma cacao HOM05D006451 ORTHO05D007680 6.1e-09 66.2 46 69.6
CANSAT78G2142 Cannabis sativa HOM05D006451 ORTHO05D007680 7.9e-09 65.9 42 71.4
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 7.9e-09 65.9 42 71.4
THA.LOC104826059 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 7.9e-09 65.9 49 65.3
Lj6g0024617 Lotus japonicus HOM05D006451 ORTHO05D007680 1.0e-08 65.5 42 73.8
Nn6g34139 Nelumbo nucifera HOM05D006451 ORTHO05D007680 1.0e-08 65.5 42 71.4
Thhalv10008141m.g Eutrema salsugineum HOM05D006451 ORTHO05D007680 1.3e-08 65.1 46 69.6
Manes.03G174100 Manihot esculenta HOM05D006451 ORTHO05D007680 1.3e-08 65.1 46 71.7
Sed0026394 Sechium edule HOM05D006451 ORTHO05D007680 1.3e-08 65.1 47 63.8
Solyc09g082540.3 Solanum lycopersicum HOM05D006451 ORTHO05D007680 1.3e-08 65.1 46 69.6
THA.LOC104801113 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 1.3e-08 65.1 49 65.3
CiPaw.01G196900 Carya illinoinensis HOM05D006451 ORTHO05D007680 2.3e-08 64.3 49 63.3
BcaC07g42200 Brassica carinata HOM05D006451 ORTHO05D007680 3.9e-08 63.5 49 65.3
GSVIVG01018026001 Vitis vinifera HOM05D006451 ORTHO05D007680 3.9e-08 63.5 46 65.2
Glyma.02G004400 Glycine max HOM05D006451 ORTHO05D007680 6.7e-08 62.8 49 63.3
MD13G1198100 Malus domestica HOM05D006451 ORTHO05D007680 6.7e-08 62.8 49 63.3
MD16G1198200 Malus domestica HOM05D006451 ORTHO05D007680 6.7e-08 62.8 49 63.3
Nitab4.5_0003249g0030 Nicotiana tabacum HOM05D006451 ORTHO05D007680 6.7e-08 62.8 49 67.3
Prupe.1G019800 Prunus persica HOM05D006451 ORTHO05D007680 6.7e-08 62.8 49 61.2
MSTRG.4055 Avicennia marina HOM05D006451 ORTHO05D007680 8.7e-08 62.4 49 63.3
Nitab4.5_0000085g0050 Nicotiana tabacum HOM05D006451 ORTHO05D007680 8.7e-08 62.4 42 73.8
ClCG06G006410 Citrullus lanatus HOM05D006451 ORTHO05D007680 1.1e-07 62.0 49 63.3
Cc03_g04170 Coffea canephora HOM05D006451 ORTHO05D007680 1.5e-07 61.6 49 67.3
PSO210G4482 Papaver somniferum HOM05D006451 ORTHO05D007680 1.5e-07 61.6 42 69.0
Phvul.007G277400 Phaseolus vulgaris HOM05D006451 ORTHO05D007680 1.5e-07 61.6 53 58.5
TWI09G1365 Tripterygium wilfordii HOM05D006451 ORTHO05D007680 1.5e-07 61.6 49 65.3
PSO170G5536 Papaver somniferum HOM05D006451 ORTHO05D007680 1.9e-07 61.2 35 80.0
Potri.008G156500 Populus trichocarpa HOM05D006451 ORTHO05D007680 1.9e-07 61.2 46 67.4
EL10Ac3g06461 Beta vulgaris HOM05D006451 ORTHO05D007680 2.5e-07 60.8 45 66.7
Sabra10G0060200 Salix brachista HOM05D006451 ORTHO05D007680 2.5e-07 60.8 46 65.2
Eucgr.H03421 Eucalyptus grandis HOM05D006451 ORTHO05D007680 3.3e-07 60.5 46 58.7
Lsat_1_v5_gn_1_112581 Lactuca sativa HOM05D006451 ORTHO05D007680 3.3e-07 60.5 49 59.2
DCAR_027237 Daucus carota HOM05D006451 ORTHO05D007680 4.3e-07 60.1 49 67.3
Potri.010G082900 Populus trichocarpa HOM05D006451 ORTHO05D007680 4.3e-07 60.1 41 70.7
ECA248G3783 Erigeron canadensis HOM05D006451 ORTHO05D007680 7.4e-07 59.3 47 57.4
Aqoxy2G03443 Aquilegia oxysepala HOM05D006451 ORTHO05D007680 1.6e-06 58.2 42 64.3
Ah.07g204140 Amaranthus hybridus HOM05D006451 ORTHO05D007680 3.7e-06 57.0 46 58.7
AUR62043956 Chenopodium quinoa HOM05D006451 ORTHO05D007680 3.7e-06 57.0 46 60.9


User provided reference genes

Program Settings