Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 7.8e-146 520.4 254 100.0
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.5e-120 436.4 254 86.6
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 3.0e-105 385.6 253 76.3
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 2.2e-103 379.4 247 77.7
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.7e-103 378.6 252 74.6
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 8.2e-103 377.5 250 76.8
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.4e-102 375.9 252 74.6
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 3.1e-102 375.6 245 76.7
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 5.3e-102 374.8 236 80.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 1.2e-101 373.6 223 80.3
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.0e-100 370.5 253 73.1
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.3e-100 370.2 253 73.1
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.2e-100 369.4 253 73.1
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 2.9e-100 369.0 197 87.3
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 8.5e-100 367.5 197 88.8
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 1.1e-99 367.1 249 74.3
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 1.4e-99 366.7 250 74.4
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 1.4e-99 366.7 198 86.9
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.9e-99 366.3 200 86.0
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 9.4e-99 364.0 250 73.6
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.6e-98 363.2 197 86.3
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 2.1e-98 362.8 213 81.2
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 2.7e-98 362.5 248 74.6
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 2.7e-98 362.5 196 86.7
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 3.6e-98 362.1 253 71.9
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 3.6e-98 362.1 224 79.0
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 4.6e-98 361.7 197 85.8
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 4.6e-98 361.7 250 73.2
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 6.1e-98 361.3 247 72.1
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 7.9e-98 360.9 198 84.3
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.0e-97 360.5 233 74.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.4e-97 360.1 251 72.1
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 3.0e-97 359.0 221 76.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 3.0e-97 359.0 200 84.0
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 3.9e-97 358.6 195 85.6
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 6.7e-97 357.8 206 81.1
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 8.8e-97 357.5 245 71.4
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.1e-96 357.1 223 76.7
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.1e-96 357.1 222 78.4
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 2.0e-96 356.3 205 83.4
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 2.5e-96 355.9 212 79.2
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 9.7e-96 354.0 248 72.6
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.2e-95 352.8 249 72.3
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 8.2e-95 350.9 288 65.6
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.1e-94 350.5 205 81.5
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.4e-94 350.1 251 70.1
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 2.4e-94 349.4 214 77.6
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 3.1e-94 349.0 224 74.6
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 4.1e-94 348.6 213 78.9
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 9.1e-94 347.4 223 75.3
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.2e-93 347.1 206 79.6
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.0e-93 346.3 248 69.8
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.0e-93 346.3 212 79.2
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 2.6e-93 345.9 249 70.7
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 5.9e-93 344.7 222 74.3
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 7.7e-93 344.4 247 70.9
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.3e-92 343.6 195 82.6
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.2e-92 342.8 247 70.9
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 2.2e-92 342.8 248 69.4
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 2.9e-92 342.4 204 78.9
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 2.9e-92 342.4 229 73.8
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 5.0e-92 341.7 236 73.7
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 6.5e-92 341.3 195 82.6
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 6.5e-92 341.3 255 68.2
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 1.4e-91 340.1 235 71.5
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.4e-91 340.1 194 80.9
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.5e-91 339.3 255 67.8
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 4.2e-91 338.6 254 69.7
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 3.6e-90 335.5 245 70.2
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.8e-89 333.2 254 68.9
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.8e-89 333.2 197 76.1
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 8.8e-89 330.9 195 79.0
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 2.6e-88 329.3 248 68.5
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 7.4e-88 327.8 193 78.2
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.3e-87 327.0 249 67.1
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.4e-86 323.6 249 67.9
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.4e-86 322.8 224 72.3
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 7.7e-85 317.8 219 73.1
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.5e-83 312.8 252 65.5
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 1.2e-82 310.5 208 75.5
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.8e-81 306.6 249 60.2
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.0e-81 305.8 220 70.9
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 4.4e-80 302.0 196 74.0
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 7.5e-80 301.2 247 65.6
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.3e-79 300.4 195 70.8
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.4e-78 297.0 203 72.4
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 9.1e-78 294.3 197 73.6
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 7.7e-77 291.2 206 68.0
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.9e-76 289.3 174 73.6
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 1.8e-73 280.0 233 60.5
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 5.2e-73 278.5 206 70.4
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 2.8e-71 272.7 187 73.3
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 3.1e-70 269.2 196 67.3
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 3.8e-68 262.3 210 64.8
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.7e-66 256.1 148 79.7
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.2e-64 250.8 168 73.8
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.2e-56 224.2 219 58.4
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.5e-56 223.8 219 58.4
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.0e-56 223.4 173 61.3
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 4.9e-55 218.8 137 78.1
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 8.6e-52 208.0 201 54.7
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.6e-50 203.8 217 49.3
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 5.8e-48 195.3 200 54.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 1.3e-44 184.1 115 74.8
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.6e-42 177.2 149 55.0
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 6.8e-41 171.8 105 76.2
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 2.6e-40 169.9 103 73.8
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 9.6e-27 124.8 208 39.9
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 4.7e-26 122.5 71 84.5
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 4.4e-24 115.9 70 71.4
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 1.2e-13 81.3 50 76.0


User provided reference genes

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