Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 5.6e-183 644.0 306 100.0
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 2.4e-165 585.5 300 91.3
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 1.0e-163 580.1 298 91.6
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.2e-161 573.2 295 90.8
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 6.1e-161 570.9 296 90.2
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 3.9e-160 568.2 299 89.0
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 5.1e-160 567.8 298 88.6
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 6.7e-160 567.4 297 88.6
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 8.2e-158 560.5 298 87.2
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 2.4e-157 558.9 298 86.9
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 2.4e-157 558.9 298 86.6
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 3.1e-157 558.5 297 86.9
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 3.1e-157 558.5 298 86.6
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 5.3e-157 557.8 298 86.9
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 7.0e-157 557.4 298 85.2
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 7.0e-157 557.4 299 87.3
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 9.1e-157 557.0 298 85.6
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.1e-157 557.0 298 85.6
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.1e-157 557.0 298 85.6
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.2e-156 556.6 296 86.1
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.6e-156 555.4 299 86.3
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.4e-156 555.1 298 84.9
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 3.4e-156 555.1 299 83.9
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 3.4e-156 555.1 298 86.2
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.9e-156 554.3 297 85.5
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.9e-156 554.3 298 85.2
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 7.7e-156 553.9 296 86.8
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.0e-155 553.5 298 84.6
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-155 553.1 297 85.9
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 1.7e-155 552.7 298 85.2
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.7e-155 552.7 298 85.9
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.7e-155 552.7 298 85.9
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 5.0e-155 551.2 298 84.9
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 5.0e-155 551.2 299 83.9
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 8.5e-155 550.4 299 84.3
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.1e-154 550.1 296 85.5
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.4e-154 549.7 298 83.9
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 7.2e-154 547.4 298 84.9
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 9.4e-154 547.0 295 85.8
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 9.4e-154 547.0 298 84.9
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.2e-153 546.6 299 84.3
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 1.0e-152 543.5 304 83.9
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 1.0e-152 543.5 296 84.1
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.0e-152 543.5 298 83.2
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 2.3e-152 542.3 296 84.1
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 3.0e-152 542.0 298 83.6
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 3.0e-152 542.0 298 82.2
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 5.2e-152 541.2 296 83.1
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 8.8e-152 540.4 298 82.2
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.1e-151 540.0 298 84.2
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 2.0e-151 539.3 299 83.9
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.6e-151 538.9 298 81.9
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 5.7e-151 537.7 296 83.4
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 2.8e-150 535.4 309 82.5
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 3.7e-150 535.0 298 83.9
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 4.8e-150 534.6 298 81.9
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 6.3e-150 534.3 299 81.9
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.4e-149 533.1 298 81.9
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 3.1e-149 531.9 298 82.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 4.1e-149 531.6 298 81.9
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 7.0e-149 530.8 298 81.9
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 7.0e-149 530.8 298 81.9
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 3.5e-148 528.5 296 82.1
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.0e-147 526.9 298 81.9
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.5e-146 523.1 301 80.7
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 2.5e-146 522.3 298 80.9
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.2e-146 521.9 296 80.1
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 6.1e-145 517.7 298 79.5
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 8.0e-145 517.3 296 81.1
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.4e-144 516.5 299 80.3
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 2.6e-143 512.3 293 81.9
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 2.6e-143 512.3 298 78.5
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 1.3e-142 510.0 338 72.5
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 1.7e-142 509.6 306 78.4
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 1.7e-142 509.6 306 78.4
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 3.7e-142 508.4 306 78.1
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 1.4e-141 506.5 306 77.5
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 1.2e-140 503.4 295 77.6
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 7.0e-133 477.6 250 88.0
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 3.3e-130 468.8 262 80.9
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 4.0e-128 461.8 248 85.1
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.3e-126 456.8 254 81.9
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.2e-126 456.1 241 85.9
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.1e-125 453.8 309 73.8
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.2e-124 450.3 250 82.0
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 7.8e-124 447.6 241 83.8
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.0e-123 447.2 263 79.5
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 5.0e-123 444.9 292 70.2
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 6.6e-123 444.5 261 81.2
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.9e-122 443.0 249 79.5
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.0e-120 435.3 241 81.3
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 8.9e-120 434.1 291 67.4
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 2.4e-117 426.0 294 66.0
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 2.7e-116 422.5 292 64.7
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 3.9e-115 418.7 226 85.4
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 1.5e-111 406.8 291 64.6
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.2e-108 397.1 218 83.9
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 4.4e-103 378.6 204 84.3
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 3.5e-100 369.0 208 82.2
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 8.9e-96 354.4 224 74.1
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.4e-95 352.4 255 70.6
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 5.8e-95 351.7 182 84.6
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.2e-71 274.2 170 72.4
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 2.2e-70 270.0 297 47.1
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 8.4e-70 268.1 296 48.0
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 5.7e-66 255.4 177 70.1
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 4.9e-62 242.3 134 85.8
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 5.5e-61 238.8 139 81.3
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.3e-58 229.6 167 66.5
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 1.0e-54 218.0 308 40.6
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 4.2e-45 186.0 277 38.3
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 3.0e-43 179.9 136 66.9
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.6e-42 176.8 148 62.8
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 4.4e-42 176.0 250 42.4
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 7.7e-39 165.2 98 76.5
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 3.7e-33 146.4 289 34.6
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 6.5e-30 135.6 277 33.2
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.5e-29 134.4 157 45.2
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.7e-22 110.9 69 72.5
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.1e-16 91.7 51 78.4
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 4.1e-16 89.7 57 73.7
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.3e-14 84.7 41 92.7
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 3.8e-14 83.2 58 60.3
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 4.0e-11 73.2 42 78.6
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-06 57.8 30 86.7
SEGI_18314 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 6.6e-06 55.8 25 88.0


User provided reference genes

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