Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13311 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.0e-99 366.7 180 100.0
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 1.1e-45 187.2 245 48.6
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 2.9e-38 162.5 246 41.9
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 3.2e-37 159.1 194 48.5
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 6.1e-36 154.8 246 41.1
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.0e-34 149.8 246 39.4
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.0e-34 149.8 246 39.4
vmacro13422 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.8e-33 145.2 281 38.1
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 2.0e-31 139.8 248 38.7
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 2.9e-30 136.0 246 38.2
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 8.6e-30 134.4 245 38.4
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 1.9e-29 133.3 246 35.8
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 3.2e-29 132.5 246 38.2
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 8.0e-28 127.9 245 35.1
RcHm_v2.0_Chr1g0353691 Rosa chinensis HOM05D004612 ORTHO05D004940 8.0e-28 127.9 248 36.3
Prupe.2G162500 Prunus persica HOM05D004612 ORTHO05D004940 1.0e-27 127.5 245 35.5
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 1.4e-27 127.1 246 36.6
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 1.8e-27 126.7 245 34.7
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 8.8e-27 124.4 244 35.2
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 8.8e-27 124.4 244 35.2
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 8.8e-27 124.4 244 35.2
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 8.8e-27 124.4 244 35.2
MD01G1053600 Malus domestica HOM05D004612 ORTHO05D004940 4.4e-26 122.1 205 38.0
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 7.5e-26 121.3 245 35.5
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 1.7e-25 120.2 245 34.7
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 4.9e-25 118.6 241 35.3
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 6.3e-25 118.2 229 36.7
COL.COLO4_12673 Corchorus olitorius HOM05D004612 ORTHO05D004940 6.3e-25 118.2 245 35.9
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.1e-24 117.5 245 35.9
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 1.4e-24 117.1 245 33.9
Gohir.D11G091300 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.8e-24 116.7 245 35.5
CSS0040114 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 4.1e-24 115.5 176 44.3
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 5.4e-24 115.2 245 35.5
MBI17_g08173_MAGBIO Magnolia biondii HOM05D004612 ORTHO05D004940 3.5e-23 112.5 259 32.8
Lsat_1_v5_gn_4_36480 Lactuca sativa HOM05D004612 ORTHO05D004940 4.5e-23 112.1 202 37.6
vmacro00164 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.5e-23 112.1 176 44.9
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 1.3e-22 110.5 229 34.1
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 1.3e-22 110.5 245 33.9
Sed0015875 Sechium edule HOM05D004612 ORTHO05D004940 2.3e-22 109.8 233 34.3
AUR62033332 Chenopodium quinoa HOM05D004612 ORTHO05D004940 5.0e-22 108.6 242 33.9
Nitab4.5_0002608g0040 Nicotiana tabacum HOM05D004612 ORTHO05D004940 5.0e-22 108.6 234 33.3
Sabra14G0058500 Salix brachista HOM05D004612 ORTHO05D004940 6.6e-22 108.2 248 33.9
TWI59G1187 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 6.6e-22 108.2 245 32.7
PGR031G1383 Punica granatum HOM05D004612 ORTHO05D004940 8.6e-22 107.8 209 34.9
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 1.1e-21 107.5 247 32.8
AUR62004317 Chenopodium quinoa HOM05D004612 ORTHO05D004940 1.1e-21 107.5 245 34.3
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 1.1e-21 107.5 251 34.3
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 1.5e-21 107.1 215 35.8
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 1.9e-21 106.7 232 33.2
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 2.5e-21 106.3 288 29.5
Nitab4.5_0010827g0010 Nicotiana tabacum HOM05D004612 ORTHO05D004940 4.3e-21 105.5 220 34.5
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 9.5e-21 104.4 210 34.8
Manes.12G065000 Manihot esculenta HOM05D004612 ORTHO05D004940 9.5e-21 104.4 245 32.2
Phvul.011G160800 Phaseolus vulgaris HOM05D004612 ORTHO05D004940 9.5e-21 104.4 210 33.3
Sopen05g028090 Solanum pennellii HOM05D004612 ORTHO05D004940 1.6e-20 103.6 244 33.2
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 2.1e-20 103.2 244 32.0
Potri.014G080600 Populus trichocarpa HOM05D004612 ORTHO05D004940 2.1e-20 103.2 247 33.6
Ciclev10024326m.g Citrus clementina HOM05D004612 ORTHO05D004940 2.8e-20 102.8 231 32.5
Cc02_g37600 Coffea canephora HOM05D004612 ORTHO05D004940 3.6e-20 102.4 248 32.7
Sc07g0008070 Simmondsia chinensis HOM05D004612 ORTHO05D004940 3.6e-20 102.4 248 31.5
MSTRG.17249 Avicennia marina HOM05D004612 ORTHO05D004940 8.0e-20 101.3 212 34.9
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 8.0e-20 101.3 296 28.4
Solyc05g048770.3 Solanum lycopersicum HOM05D004612 ORTHO05D004940 1.0e-19 100.9 244 32.8
Prupe.8G034000 Prunus persica HOM05D004612 ORTHO05D004940 1.4e-19 100.5 82 54.9
BolC9t52984H Brassica oleracea HOM05D004612 ORTHO05D004940 1.2e-18 97.4 218 33.0
HanXRQChr16g0523031 Helianthus annuus HOM05D004612 ORTHO05D004940 1.2e-18 97.4 207 32.9
C09p00500 Brassica napus HOM05D004612 ORTHO05D004940 2.0e-18 96.7 218 33.0
BraA09t35721Z Brassica rapa HOM05D004612 ORTHO05D004940 2.6e-18 96.3 221 33.0
DCAR_008600 Daucus carota HOM05D004612 ORTHO05D004940 3.4e-18 95.9 244 30.3
CAN.G718.1 Capsicum annuum HOM05D004612 ORTHO05D004940 4.4e-18 95.5 245 30.2
BcaNung05358 Brassica carinata HOM05D004612 ORTHO05D004940 5.7e-18 95.1 194 34.0
Aqoxy46s002 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 9.8e-18 94.4 246 30.1
AL6G52840 Arabidopsis lyrata HOM05D004612 ORTHO05D004940 9.8e-18 94.4 218 31.2
Thhalv10028700m.g Eutrema salsugineum HOM05D004612 ORTHO05D004940 9.8e-18 94.4 225 31.1
Ca_27541_v3 Cicer arietinum L. HOM05D004612 ORTHO05D004940 1.3e-17 94.0 211 33.2
PSO063G2700 Papaver somniferum HOM05D004612 ORTHO05D004940 1.3e-17 94.0 247 29.1
Sp6g00630 Schrenkiella parvula HOM05D004612 ORTHO05D004940 1.3e-17 94.0 222 31.5
Lj3g0020312 Lotus japonicus HOM05D004612 ORTHO05D004940 1.7e-17 93.6 218 30.7
vmacro13310 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.7e-17 93.6 74 68.9
A09p00400 Brassica napus HOM05D004612 ORTHO05D004940 2.9e-17 92.8 221 32.6
CARHR248760 Cardamine hirsuta HOM05D004612 ORTHO05D004940 6.4e-17 91.7 220 29.1
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 8.3e-17 91.3 210 32.9
Oeu014678.1 Olea europaea HOM05D004612 ORTHO05D004940 8.3e-17 91.3 101 49.5
SGA_v2.0_scaffold95G28856 Striga asiatica HOM05D004612 ORTHO05D004940 8.3e-17 91.3 191 36.6
Medtr8g031580 Medicago truncatula HOM05D004612 ORTHO05D004940 1.4e-16 90.5 212 31.6
CSS0003938 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.8e-16 90.1 214 33.6
PSO782G5368 Papaver somniferum HOM05D004612 ORTHO05D004940 1.8e-16 90.1 247 29.1
AT4G00590 Arabidopsis thaliana HOM05D004612 ORTHO05D004940 3.2e-16 89.4 230 30.0
BcaB01g02263 Brassica carinata HOM05D004612 ORTHO05D004940 3.2e-16 89.4 217 32.7
unitig_0.g1278 Utricularia gibba HOM05D004612 ORTHO05D004940 3.2e-16 89.4 226 33.6
arahy.Tifrunner.gnm1.ann1.4I97V1 Arachis hypogaea HOM05D004612 ORTHO05D004940 4.1e-16 89.0 215 30.2
VMungo1127G0482 Vigna mungo HOM05D004612 ORTHO05D004940 7.0e-16 88.2 81 48.1
BcaB01g02261 Brassica carinata HOM05D004612 ORTHO05D004940 9.2e-16 87.8 218 31.2
Nitab4.5_0010110g0020 Nicotiana tabacum HOM05D004612 ORTHO05D004940 1.2e-15 87.4 245 29.8
SalBow3G1907 Salvia bowleyana HOM05D004612 ORTHO05D004940 1.2e-15 87.4 245 29.0
BcaC04g24158 Brassica carinata HOM05D004612 ORTHO05D004940 2.7e-15 86.3 214 31.3
ECA234G1569 Erigeron canadensis HOM05D004612 ORTHO05D004940 2.7e-15 86.3 221 29.9
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 4.6e-15 85.5 218 31.7
HPP92_021103 Vanilla planifolia HOM05D004612 ORTHO05D004940 1.0e-14 84.3 248 28.2
Carub.0006s3663 Capsella rubella HOM05D004612 ORTHO05D004940 1.3e-14 84.0 222 29.7
Ah.05g176430 Amaranthus hybridus HOM05D004612 ORTHO05D004940 2.3e-14 83.2 101 44.6
AUR62023440 Chenopodium quinoa HOM05D004612 ORTHO05D004940 3.9e-14 82.4 228 30.7
AUR62033327 Chenopodium quinoa HOM05D004612 ORTHO05D004940 3.9e-14 82.4 228 30.7
THA.LOC104801450 Tarenaya hassleriana HOM05D004612 ORTHO05D004940 3.9e-14 82.4 218 28.4
CSS0037024 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 6.6e-14 81.6 186 36.0
Peaxi162Scf00397g00041 Petunia axillaris HOM05D004612 ORTHO05D004940 6.6e-14 81.6 236 28.4
Atru.chr5.446 Acer truncatum HOM05D004612 ORTHO05D004940 1.1e-13 80.9 69 58.0
ATR0680G383 Amborella trichopoda HOM05D004612 ORTHO05D004940 1.1e-13 80.9 102 42.2
Peaxi162Scf00246g01122 Petunia axillaris HOM05D004612 ORTHO05D004940 1.1e-13 80.9 87 47.1
Hund16942 Selenicereus undatus HOM05D004612 ORTHO05D004940 1.1e-13 80.9 109 44.0
Psat4g153800 Pisum sativum HOM05D004612 ORTHO05D004940 9.5e-13 77.8 86 44.2
TPR.G4369 Trifolium pratense HOM05D004612 ORTHO05D004940 1.2e-12 77.4 102 44.1
Aa31LG5G400 Aethionema arabicum HOM05D004612 ORTHO05D004940 8.0e-12 74.7 227 26.4
Os04g0682500 Oryza sativa ssp. japonica HOM05D004612 ORTHO05D004940 8.9e-11 71.2 245 24.9
Zm00001eb433970 Zea mays HOM05D004612 ORTHO05D004940 2.6e-10 69.7 91 40.7
Oeu004526.1 Olea europaea HOM05D004612 ORTHO05D004940 1.4e-08 63.9 44 68.2
CSS0007536 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-08 63.5 102 40.2
vmacro22088 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 2.4e-08 63.2 36 83.3
CDE05G2136 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 3.2e-08 62.8 74 48.6
Nitab4.5_0000094g0210 Nicotiana tabacum HOM05D004612 ORTHO05D004940 5.4e-08 62.0 80 43.8
Aqoxy5G04026 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 7.8e-07 58.2 94 34.0
Atru.chr5.445 Acer truncatum HOM05D004612 ORTHO05D004940 1.0e-06 57.8 94 43.6
CDE05G3327 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 1.3e-06 57.4 104 39.4
AagrBONN_evm.TU.Sc2ySwM_344.1798 Anthoceros agrestis HOM05D004612 ORTHO05D004940 5.0e-06 55.5 235 26.4
CSS0007523 Camellia sinensis var. sinensis HOM05D025959 ORTHO05D111461 6.6e-06 55.1 44 63.6
CSS0005777 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 8.6e-06 54.7 35 71.4


User provided reference genes

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