Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 0.0e+00 1406.0 688 100.0
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 0.0e+00 1095.5 680 80.7
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 6.3e-283 977.2 691 71.8
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 3.4e-268 928.3 701 68.6
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 6.8e-261 904.0 681 68.7
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 7.8e-249 864.0 696 62.9
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 1.3e-248 863.2 693 63.6
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 3.3e-247 858.6 685 63.6
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 4.3e-247 858.2 681 64.0
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 6.8e-245 850.9 692 63.4
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 1.1e-242 843.6 698 61.9
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 1.9e-242 842.8 694 61.1
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.7e-240 836.3 692 63.2
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 3.9e-240 835.1 696 61.5
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 1.1e-239 833.6 695 61.3
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 1.9e-239 832.8 683 62.4
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 2.5e-239 832.4 687 62.3
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 4.3e-239 831.6 676 62.6
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 5.6e-239 831.2 695 61.7
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.3e-239 830.9 698 60.6
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 1.1e-237 827.0 684 62.7
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 1.1e-237 827.0 697 60.8
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 1.4e-237 826.6 697 61.4
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 1.8e-237 826.2 699 60.2
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 9.0e-237 823.9 689 61.7
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 2.6e-236 822.4 682 62.3
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 4.4e-236 821.6 695 60.9
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 1.3e-235 820.1 688 61.2
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 2.2e-235 819.3 703 59.7
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 2.9e-235 818.9 685 61.3
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 1.1e-234 817.0 688 60.9
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 3.2e-234 815.5 679 62.0
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 7.1e-234 814.3 733 58.0
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 9.3e-234 813.9 679 61.4
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.6e-233 813.1 722 58.7
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 2.7e-233 812.4 717 59.3
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 3.5e-233 812.0 684 60.4
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 1.7e-232 809.7 686 62.0
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 3.9e-232 808.5 693 60.9
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 5.1e-232 808.1 697 61.0
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 1.9e-231 806.2 696 59.6
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 1.9e-231 806.2 694 58.8
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.9e-231 806.2 715 59.0
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.6e-230 803.1 715 58.9
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 3.6e-230 802.0 685 60.1
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 4.8e-230 801.6 700 58.9
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 8.1e-230 800.8 698 59.6
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 8.1e-230 800.8 698 59.6
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 2.4e-229 799.3 685 61.3
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 2.0e-228 796.2 687 60.3
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 3.4e-228 795.4 682 59.8
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 4.5e-228 795.0 721 57.3
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 1.3e-227 793.5 694 60.1
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 2.2e-227 792.7 725 58.6
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 2.4e-226 789.3 686 60.2
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 7.1e-226 787.7 674 61.3
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 1.6e-225 786.6 684 60.7
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 2.7e-225 785.8 595 67.9
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 2.7e-225 785.8 696 57.5
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 6.0e-225 784.6 675 61.2
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 1.8e-224 783.1 683 60.0
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 5.6e-223 778.1 655 60.9
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 5.6e-223 778.1 683 58.7
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 2.8e-222 775.8 681 59.8
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 4.8e-222 775.0 684 59.6
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 8.1e-222 774.2 678 60.8
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 8.1e-222 774.2 702 58.8
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 1.1e-221 773.9 685 59.0
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 1.4e-221 773.5 685 59.3
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 1.4e-221 773.5 682 59.8
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 1.8e-221 773.1 686 59.2
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 2.6e-220 769.2 678 60.2
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 4.5e-220 768.5 685 59.0
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 1.7e-219 766.5 679 58.9
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 3.8e-219 765.4 682 59.2
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 3.8e-219 765.4 675 59.4
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 1.6e-217 760.0 678 57.8
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 1.3e-214 750.4 680 57.1
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 2.8e-214 749.2 700 56.9
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 1.4e-213 746.9 684 56.3
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 8.4e-211 737.6 680 58.7
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 9.3e-210 734.2 670 57.0
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 9.7e-207 724.2 689 55.6
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 4.8e-206 721.8 541 67.8
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 1.2e-204 717.2 641 58.0
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 1.7e-203 713.4 688 55.8
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 1.9e-194 683.3 675 53.5
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 9.7e-191 671.0 645 54.7
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 2.6e-183 646.4 680 52.1
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 2.0e-175 620.2 479 64.1
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 4.0e-168 595.9 668 48.7
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 8.8e-168 594.7 665 47.1
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 4.1e-165 585.9 596 52.5
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 9.5e-162 574.7 677 48.3
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 2.0e-148 530.4 470 57.9
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 8.6e-147 525.0 346 71.7
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 1.1e-146 524.6 558 52.2
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 3.9e-131 473.0 321 70.4
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 1.2e-129 468.0 319 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 6.9e-120 435.6 525 45.0
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 1.0e-94 352.1 466 44.2
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 1.0e-75 288.9 314 50.0
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 7.2e-69 266.2 184 64.7
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 1.3e-65 255.4 200 65.0
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 4.5e-63 246.9 196 62.8
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 6.5e-54 216.5 165 67.3
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 1.4e-51 208.8 150 69.3
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 7.0e-48 196.4 238 44.5
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 4.7e-44 183.7 128 71.1
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 6.8e-43 179.9 150 58.7
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 5.8e-34 150.2 107 64.5
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 4.9e-33 147.1 110 65.5
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 1.1e-32 146.0 74 87.8
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 2.7e-31 141.4 158 48.1
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 4.3e-21 107.5 68 70.6
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 4.9e-17 94.0 127 42.5


User provided reference genes

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