Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13299 Vaccinium macrocarpon HOM05D000008 ORTHO05D426510 3.4e-150 535.0 278 100.0
vmacro13300 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 2.0e-17 94.0 52 92.3
vmacro13302 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 5.4e-15 85.9 44 88.6
Actinidia33428 Actinidia chinensis HOM05D000008 ORTHO05D000005 1.3e-08 64.7 39 76.9
PGR031G3710 Punica granatum HOM05D000008 ORTHO05D000005 1.7e-08 64.3 42 76.2
Dinv32459 Davidia involucrata HOM05D000008 ORTHO05D000005 1.1e-07 61.6 68 51.5
CSS0018690 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 4.1e-07 59.7 42 71.4
Cpa.g.sc18.232 Carica papaya HOM05D000008 ORTHO05D000005 5.4e-07 59.3 37 75.7
arahy.Tifrunner.gnm1.ann1.02XPQ8 Arachis hypogaea HOM05D000008 ORTHO05D000005 7.1e-07 58.9 33 84.8
arahy.Tifrunner.gnm1.ann1.2BK3KU Arachis hypogaea HOM05D000008 ORTHO05D000005 7.1e-07 58.9 33 84.8
Gohir.A08G130300 Gossypium hirsutum HOM05D000008 ORTHO05D000005 7.1e-07 58.9 36 77.8
Oeu004518.1 Olea europaea HOM05D000008 ORTHO05D000005 7.1e-07 58.9 39 71.8
vmacro20952 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 7.1e-07 58.9 40 67.5
Actinidia20928 Actinidia chinensis HOM05D000008 ORTHO05D000005 1.2e-06 58.2 41 68.3
Gohir.D08G151700 Gossypium hirsutum HOM05D000008 ORTHO05D000005 1.2e-06 58.2 34 82.4
Gorai.004G157600 Gossypium raimondii HOM05D000008 ORTHO05D000005 1.2e-06 58.2 34 82.4
Lj7A516T64 Lonicera japonica HOM05D000008 ORTHO05D000005 1.2e-06 58.2 37 73.0
COL.COLO4_12681 Corchorus olitorius HOM05D000008 ORTHO05D000005 1.6e-06 57.8 47 63.8
PGSC0003DMG400000027 Solanum tuberosum HOM05D000008 ORTHO05D000005 1.6e-06 57.8 42 61.9
PGSC0003DMG400021654 Solanum tuberosum HOM05D000008 ORTHO05D000005 2.1e-06 57.4 39 69.2
Oeu044092.1 Olea europaea HOM05D000008 ORTHO05D000005 2.7e-06 57.0 40 65.0
Glyma.09G261600 Glycine max HOM05D000008 ORTHO05D000005 3.5e-06 56.6 44 63.6
Phvul.008G067300 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 3.5e-06 56.6 44 63.6
Prupe.2G164300 Prunus persica HOM05D000008 ORTHO05D000005 3.5e-06 56.6 37 73.0
Glyma.18G230600 Glycine max HOM05D000008 ORTHO05D000005 6.0e-06 55.8 36 72.2
Lalb_Chr10g0097171 Lupinus albus HOM05D000008 ORTHO05D000005 6.0e-06 55.8 35 74.3
Manes.01G259550 Manihot esculenta HOM05D000008 ORTHO05D000005 7.8e-06 55.5 37 75.7
Manes.05G037100 Manihot esculenta HOM05D000008 ORTHO05D000005 7.8e-06 55.5 37 75.7
Psat3g110520 Pisum sativum HOM05D000008 ORTHO05D000005 7.8e-06 55.5 34 76.5
Solyc01g094360.3 Solanum lycopersicum HOM05D000008 ORTHO05D000005 7.8e-06 55.5 42 59.5
Sopen01g038150 Solanum pennellii HOM05D000008 ORTHO05D000005 7.8e-06 55.5 42 59.5


User provided reference genes

Program Settings