Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 1.0e-76 290.0 149 100.0
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 3.9e-52 208.4 227 56.4
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 1.2e-42 176.8 147 66.7
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 9.2e-38 160.6 144 63.2
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 2.7e-37 159.1 146 62.3
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 1.5e-35 153.3 144 60.4
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 8.9e-33 144.1 146 58.2
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 7.1e-30 134.4 148 56.8
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 1.3e-28 130.2 127 59.1
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 1.7e-28 129.8 141 54.6
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 1.7e-28 129.8 131 55.7
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 3.3e-27 125.6 148 52.0
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 4.3e-27 125.2 145 53.8
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 5.6e-27 124.8 137 53.3
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 9.6e-27 124.0 192 44.8
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 1.2e-26 123.6 126 58.7
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 1.2e-26 123.6 150 52.0
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 2.1e-26 122.9 138 55.1
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 1.1e-25 120.6 135 52.6
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 1.1e-25 120.6 150 50.0
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 2.4e-25 119.4 124 55.6
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 4.0e-25 118.6 153 52.3
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 5.2e-25 118.2 148 49.3
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 5.2e-25 118.2 137 50.4
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 1.2e-24 117.1 141 52.5
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 1.2e-24 117.1 148 49.3
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 2.0e-24 116.3 137 48.9
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 3.4e-24 115.5 137 49.6
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 3.4e-24 115.5 147 49.7
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 4.4e-24 115.2 139 51.1
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 7.6e-24 114.4 142 48.6
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 9.9e-24 114.0 150 50.7
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 3.8e-23 112.1 150 48.0
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 1.4e-22 110.2 148 48.6
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 1.9e-22 109.8 135 49.6
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 2.4e-22 109.4 142 47.9
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 4.2e-22 108.6 135 49.6
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 5.4e-22 108.2 138 48.6
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 9.3e-22 107.5 129 50.4
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 2.1e-21 106.3 126 50.8
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 2.7e-21 105.9 143 46.9
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 2.7e-21 105.9 130 46.9
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 4.6e-21 105.1 123 50.4
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 1.3e-20 103.6 137 46.0
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 1.7e-20 103.2 144 45.8
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 3.0e-20 102.4 147 46.9
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 3.9e-20 102.1 142 49.3
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 6.6e-20 101.3 150 46.7
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 6.6e-20 101.3 142 45.1
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 8.7e-20 100.9 146 43.8
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 1.1e-19 100.5 148 44.6
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 1.1e-19 100.5 135 45.9
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 1.5e-19 100.1 135 52.6
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 1.9e-19 99.8 136 46.3
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 1.9e-19 99.8 139 46.8
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 1.9e-19 99.8 146 45.9
CsaV3_3G008970 Cucumis sativus L. HOM05D006065 ORTHO05D007672 2.5e-19 99.4 148 45.3
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 2.5e-19 99.4 143 44.1
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 2.5e-19 99.4 123 48.8
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 3.3e-19 99.0 135 48.1
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 4.3e-19 98.6 182 41.8
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 4.3e-19 98.6 142 45.8
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 4.3e-19 98.6 150 43.3
Nitab4.5_0008002g0050 Nicotiana tabacum HOM05D006065 ORTHO05D007672 7.3e-19 97.8 123 46.3
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 1.3e-18 97.1 149 45.6
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 1.3e-18 97.1 138 44.9
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 1.6e-18 96.7 141 45.4
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 2.8e-18 95.9 133 46.6
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 8.1e-18 94.4 145 46.9
Aqoxy7G00322 Aquilegia oxysepala HOM05D006065 ORTHO05D007672 1.1e-17 94.0 128 47.7
FAN03G2883 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.8e-17 93.2 141 45.4
FvH4_7g14190 Fragaria vesca HOM05D006065 ORTHO05D007672 2.4e-17 92.8 138 47.1
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 3.1e-17 92.4 146 45.2
FAN01G0390 Fragaria x ananassa HOM05D006065 ORTHO05D007672 3.1e-17 92.4 141 44.7
FAN06G3027 Fragaria x ananassa HOM05D006065 ORTHO05D007672 3.1e-17 92.4 138 46.4
FAN06G3847 Fragaria x ananassa HOM05D006065 ORTHO05D007672 3.1e-17 92.4 138 46.4
Nitab4.5_0001702g0100 Nicotiana tabacum HOM05D006065 ORTHO05D007672 3.1e-17 92.4 121 52.1
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 4.0e-17 92.0 139 44.6
Psat3g110920 Pisum sativum HOM05D006065 ORTHO05D007672 1.2e-16 90.5 138 45.7
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 1.5e-16 90.1 137 40.1
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 2.0e-16 89.7 148 42.6
Nitab4.5_0005277g0010 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.6e-16 89.4 128 45.3
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 2.6e-16 89.4 141 43.3
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 3.4e-16 89.0 166 40.4
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 5.8e-16 88.2 146 41.8
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 9.9e-16 87.4 132 46.2
SGA_v2.0_scaffold43G16421 Striga asiatica HOM05D006065 ORTHO05D007672 1.3e-15 87.0 151 43.0
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 1.7e-15 86.7 146 42.5
PGSC0003DMG400021646 Solanum tuberosum HOM05D006065 ORTHO05D007672 8.4e-15 84.3 158 39.9
Sopen05g028300 Solanum pennellii HOM05D006065 ORTHO05D007672 1.1e-14 84.0 121 46.3
Solyc05g049940.3 Solanum lycopersicum HOM05D006065 ORTHO05D007672 1.9e-14 83.2 121 46.3
Nn1g01520 Nelumbo nucifera HOM05D006065 ORTHO05D007672 3.2e-14 82.4 100 53.0
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 3.2e-14 82.4 145 41.4
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 7.1e-14 81.3 146 40.4
Eucgr.D02286 Eucalyptus grandis HOM05D006065 ORTHO05D007672 7.1e-14 81.3 133 40.6
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 7.1e-14 81.3 208 36.1
Gohir.A11G088300 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.6e-13 80.1 136 40.4
Gohir.D11G092600 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.6e-13 80.1 136 40.4
EL10Ac1g00426 Beta vulgaris HOM05D006065 ORTHO05D007672 2.1e-13 79.7 114 43.9
Solyc01g094510.2 Solanum lycopersicum HOM05D006065 ORTHO05D007672 7.9e-13 77.8 112 47.3
MD07G1138600 Malus domestica HOM05D006065 ORTHO05D007672 1.8e-12 76.6 114 46.5
Ah.05g180670 Amaranthus hybridus HOM05D006065 ORTHO05D007672 3.0e-12 75.9 124 40.3
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 1.9e-11 73.2 146 37.0
CDE06G0574 Ceratophyllum demersum HOM05D006065 ORTHO05D007672 2.5e-11 72.8 129 38.8
Carub.0006s3674 Capsella rubella HOM05D006065 ORTHO05D007672 9.6e-11 70.9 145 35.2
A03p32140 Brassica napus HOM05D006065 ORTHO05D007672 1.4e-09 67.0 136 33.8
BraA03t12384Z Brassica rapa HOM05D006065 ORTHO05D007672 3.1e-09 65.9 150 33.3
BcaC01g06870 Brassica carinata HOM05D006065 ORTHO05D007672 6.9e-09 64.7 135 33.3
BcaNung05355 Brassica carinata HOM05D006065 ORTHO05D007672 6.9e-09 64.7 135 33.3
BolC3t16187H Brassica oleracea HOM05D006065 ORTHO05D007672 6.9e-09 64.7 135 33.3
SEGI_06767 Sequoiadendron giganteum HOM05D006065 ORTHO05D007672 6.9e-09 64.7 144 30.6
Sed0021596 Sechium edule HOM05D006065 ORTHO05D007672 1.2e-08 63.9 143 38.5
HPP92_008504 Vanilla planifolia HOM05D006065 ORTHO05D007672 3.4e-08 62.4 140 33.6
TAR375G0974 Trochodendron aralioides HOM05D006065 ORTHO05D007672 9.9e-08 60.8 68 52.9
Potri.002G159100 Populus trichocarpa HOM05D006065 ORTHO05D007672 2.9e-07 59.3 58 60.3
CDE02G4271 Ceratophyllum demersum HOM05D000667 ORTHO05D009057 8.4e-07 57.8 59 45.8
AUR62004346 Chenopodium quinoa HOM05D006065 ORTHO05D007672 1.9e-06 56.6 91 44.0
AUR62022552 Chenopodium quinoa HOM05D006065 ORTHO05D007672 2.4e-06 56.2 91 45.1
Os04g0558500 Oryza sativa ssp. japonica HOM05D006065 ORTHO05D007672 2.4e-06 56.2 131 32.1


User provided reference genes

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