Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 0.0e+00 2337.4 1200 100.0
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 0.0e+00 1558.1 1240 71.0
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 0.0e+00 1099.7 1214 55.9
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 0.0e+00 1086.6 1210 54.6
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 7.4e-311 1070.8 1211 52.7
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.2e-308 1063.5 1190 55.1
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 6.7e-296 1021.1 1109 55.7
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 9.1e-269 931.0 1056 52.8
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 6.5e-259 898.3 1212 49.6
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 7.5e-239 831.6 1224 45.8
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 1.1e-237 827.8 1223 43.9
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 1.3e-235 820.8 1224 45.2
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 2.9e-235 819.7 1227 44.9
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 2.6e-231 806.6 1141 47.2
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 5.4e-229 798.9 1216 43.8
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 3.9e-227 792.7 1137 46.9
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 4.9e-222 775.8 1218 43.2
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 1.1e-218 764.6 1209 42.6
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 1.9e-218 763.8 1225 42.8
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 1.4e-213 747.7 1211 42.9
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.9e-213 747.3 1219 43.6
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.9e-213 747.3 1212 43.4
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 1.0e-211 741.5 1221 42.1
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 2.5e-210 736.9 1214 42.4
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 1.6e-209 734.2 1217 43.1
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 2.1e-209 733.8 1227 43.7
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.5e-204 716.5 1240 41.0
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 6.0e-204 715.7 1240 41.0
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 1.3e-203 714.5 1223 42.0
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.3e-203 714.5 1210 42.2
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 5.1e-203 712.6 1219 40.8
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 6.6e-203 712.2 1240 40.9
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 1.5e-202 711.1 1222 41.5
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 2.5e-202 710.3 1228 41.0
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 2.5e-202 710.3 1222 41.0
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 1.6e-201 707.6 1242 40.9
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.1e-201 707.2 1228 40.8
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 4.0e-200 703.0 1240 40.6
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.5e-199 701.0 1240 40.6
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.7e-198 697.6 1241 40.5
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 2.2e-198 697.2 1211 40.6
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 3.8e-198 696.4 1220 41.3
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.9e-197 694.1 1220 41.5
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.4e-197 693.7 1220 41.4
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.9e-194 684.1 1221 40.5
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 8.4e-190 668.7 1216 41.4
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 1.4e-189 667.9 1217 41.2
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 1.8e-187 661.0 1212 40.1
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 2.3e-187 660.6 1221 39.5
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 1.6e-185 654.4 1104 42.2
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 8.1e-185 652.1 1127 41.1
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 1.8e-184 651.0 1211 41.0
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 8.4e-182 642.1 1209 40.5
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 3.5e-180 636.7 1207 39.3
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 1.3e-179 634.8 1214 39.4
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 3.0e-179 633.6 1208 39.2
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 1.1e-178 631.7 1217 39.0
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 1.9e-178 630.9 1215 39.8
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.3e-178 630.2 1215 38.4
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 7.4e-178 629.0 1217 38.7
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 3.7e-177 626.7 1201 39.1
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.4e-176 624.0 1215 39.3
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 2.9e-174 617.1 1211 38.6
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 4.9e-174 616.3 1212 38.9
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 2.3e-171 607.4 1213 38.5
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 2.5e-170 604.0 1210 37.8
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 2.1e-169 600.9 1233 38.7
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 8.2e-169 599.0 1206 38.1
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 2.4e-168 597.4 1214 37.0
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 6.9e-168 595.9 1216 37.7
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 2.2e-166 590.9 1265 37.2
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 6.5e-166 589.3 1213 38.7
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 9.3e-165 585.5 1221 38.2
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 2.1e-164 584.3 1226 37.4
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 1.8e-163 581.3 1213 37.0
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 1.8e-160 571.2 1213 37.8
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 1.7e-158 564.7 1213 37.1
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 2.5e-157 560.8 1220 36.8
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 7.2e-157 559.3 1228 37.4
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 9.4e-157 558.9 1214 37.1
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 9.4e-157 558.9 1218 36.9
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 2.7e-156 557.4 1211 38.0
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 6.1e-156 556.2 1227 36.6
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 1.4e-155 555.1 1208 36.1
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 6.7e-155 552.7 1188 38.1
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 1.3e-153 548.5 1191 37.4
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 8.2e-153 545.8 1213 36.0
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 2.4e-152 544.3 1186 37.1
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 2.0e-151 541.2 1189 36.8
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 3.4e-151 540.4 1206 36.1
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 4.5e-151 540.0 1225 36.4
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.7e-150 538.1 1204 37.1
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 5.5e-149 533.1 1197 36.8
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 2.0e-146 524.6 1212 36.1
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 6.3e-145 519.6 1190 35.3
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 8.2e-145 519.2 1222 35.8
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 1.6e-143 515.0 1227 36.1
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 5.9e-143 513.1 928 41.8
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 5.9e-143 513.1 1216 35.8
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 2.2e-142 511.1 1127 36.2
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.5e-141 508.4 1127 35.8
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 7.5e-138 496.1 1206 35.7
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 3.5e-135 487.3 929 38.9
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 4.5e-135 486.9 1090 36.9
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 5.4e-128 463.4 1205 33.3
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 2.7e-127 461.1 1229 35.6
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 2.8e-121 441.0 1190 33.6
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 2.5e-117 427.9 1220 32.8
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 9.8e-114 416.0 1222 32.4
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 7.0e-112 409.8 1217 32.5
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 8.6e-110 402.9 1215 31.8
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 1.9e-101 375.2 1206 31.4
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 2.5e-101 374.8 1220 31.0
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 4.7e-100 370.5 1242 30.9
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 3.2e-96 357.8 1221 30.7
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 2.7e-95 354.8 1216 30.5
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 1.0e-94 352.8 1161 30.7
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 1.7e-94 352.1 1181 30.2
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 3.3e-93 347.8 1207 31.0
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 1.1e-91 342.8 1205 30.6
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 1.2e-90 339.3 1207 30.9
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.2e-90 339.3 1207 31.0
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 4.9e-89 334.0 1202 30.8
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 1.9e-88 332.0 1202 30.7
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 3.0e-86 324.7 621 38.3
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 3.3e-85 321.2 1215 29.5
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 4.7e-84 317.4 1216 29.1
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 6.2e-84 317.0 1187 30.3
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 6.9e-83 313.5 1215 30.0
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 1.2e-82 312.8 1215 30.0
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 1.2e-82 312.8 1215 30.0
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 7.6e-82 310.1 1228 30.2
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 5.1e-78 297.4 1226 29.4
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 9.6e-77 293.1 691 34.3
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 1.1e-75 289.7 561 36.2
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 1.2e-74 286.2 649 36.8
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 5.8e-74 283.9 1200 29.4
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 9.3e-72 276.6 823 34.5
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 1.8e-70 272.3 557 37.9
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 2.3e-70 271.9 641 35.6
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 3.0e-70 271.6 1191 28.8
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 6.7e-70 270.4 624 36.9
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 2.0e-66 258.8 1137 27.6
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.9e-64 252.3 294 51.0
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.8e-59 235.7 1115 27.7
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 6.5e-57 227.3 662 32.2
Actinidia02823 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.1e-56 226.5 380 43.7
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 2.5e-45 188.7 307 43.0
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 2.2e-44 185.7 188 58.5
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 2.5e-40 172.2 264 44.3
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 4.7e-39 167.9 1165 23.4
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 1.7e-36 159.5 1154 25.6
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 5.0e-33 147.9 236 42.8
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 1.4e-32 146.4 223 41.3
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 1.9e-32 146.0 574 28.0
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 2.0e-29 136.0 213 43.7
unitig_22.g6727 Utricularia gibba HOM05D003611 ORTHO05D004281 3.3e-29 135.2 841 26.5
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 2.2e-28 132.5 990 24.5
Duzib268G1133 Durio zibethinus HOM05D003611 ORTHO05D004281 7.2e-24 117.5 149 43.0
unitig_22.g6726 Utricularia gibba HOM05D003611 ORTHO05D004281 1.8e-22 112.8 265 33.2
Dinv32513 Davidia involucrata HOM05D003611 ORTHO05D004281 3.3e-21 108.6 108 55.6
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 9.7e-21 107.1 220 39.5
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.4e-19 103.2 161 43.5
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 7.0e-19 100.9 342 31.0
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 9.1e-19 100.5 149 47.0
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 4.5e-18 98.2 184 42.4
Rhsim03G0191400 Rhododendron simsii HOM05D003611 ORTHO05D038142 8.5e-17 94.0 319 28.2
Oeu054339.1 Olea europaea HOM05D003611 ORTHO05D004281 1.9e-16 92.8 202 36.1
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 2.7e-15 89.0 695 26.0
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 8.0e-15 87.4 865 23.6
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 8.8e-14 84.0 152 43.4
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 4.4e-13 81.6 122 49.2
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 1.7e-12 79.7 122 48.4
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.7e-12 78.6 799 23.5
Prupe.2G301400 Prunus persica HOM05D010729 ORTHO05D011897 8.3e-12 77.4 149 39.6
Potri.004G073400 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.4e-11 76.6 162 39.5
HPP92_002605 Vanilla planifolia HOM05D046274 ORTHO05D004281 9.1e-11 73.9 432 28.0
ATR0661G048 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.2e-10 73.6 204 35.3
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 1.2e-10 73.6 133 45.1
MD01G1208800 Malus domestica HOM05D010729 ORTHO05D011897 8.6e-09 67.4 197 34.0
SEGI_21460 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 1.5e-08 66.6 278 28.1
Sabra04G0048100 Salix brachista HOM05D003611 ORTHO05D011897 8.0e-07 60.8 162 34.6


User provided reference genes

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