Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13184 Vaccinium macrocarpon HOM05D001723 ORTHO05D051541 7.9e-112 407.1 208 100.0
Rhsim02G0023800 Rhododendron simsii HOM05D001723 ORTHO05D001706 8.6e-34 147.9 142 58.5
Actinidia36961 Actinidia chinensis HOM05D001723 ORTHO05D001706 6.6e-26 121.7 109 59.6
Dinv13991 Davidia involucrata HOM05D001723 ORTHO05D001706 9.0e-23 111.3 120 50.0
Lsat_1_v5_gn_5_148520 Lactuca sativa HOM05D001723 ORTHO05D001706 2.0e-22 110.2 108 49.1
Hma1.2p1_3079F.1_g332430 Hydrangea macrophylla HOM05D001723 ORTHO05D001706 2.6e-22 109.8 123 48.0
CSS0039979 Camellia sinensis var. sinensis HOM05D001723 ORTHO05D001706 1.7e-21 107.1 120 49.2
Oeu031233.1 Olea europaea HOM05D001723 ORTHO05D001706 1.7e-21 107.1 113 49.6
Cpa.g.sc58.115 Carica papaya HOM05D001723 ORTHO05D001706 2.9e-21 106.3 109 51.4
Eucgr.H03485 Eucalyptus grandis HOM05D001723 ORTHO05D001706 3.8e-21 105.9 139 45.3
MSTRG.9984 Avicennia marina HOM05D001723 ORTHO05D001706 8.4e-21 104.8 110 51.8
Prupe.1G013000 Prunus persica HOM05D001723 ORTHO05D001706 3.2e-20 102.8 122 47.5
Migut.N00180 Erythranthe guttata HOM05D001723 ORTHO05D001706 7.1e-20 101.7 109 48.6
Carub.0007s2718 Capsella rubella HOM05D001723 ORTHO05D001706 9.3e-20 101.3 110 52.7
Duzib212G0806 Durio zibethinus HOM05D001723 ORTHO05D001706 9.3e-20 101.3 120 43.3
Actinidia40150 Actinidia chinensis HOM05D001723 ORTHO05D001706 1.2e-19 100.9 129 48.8
MD16G1192900 Malus domestica HOM05D001723 ORTHO05D001706 2.1e-19 100.1 113 48.7
ECA234G1047 Erigeron canadensis HOM05D001723 ORTHO05D001706 2.7e-19 99.8 119 44.5
SGA_v2.0_scaffold257G45721 Striga asiatica HOM05D001723 ORTHO05D001706 2.7e-19 99.8 110 47.3
Thecc.04G231000 Theobroma cacao HOM05D001723 ORTHO05D001706 2.7e-19 99.8 120 45.0
MSTRG.21852 Avicennia marina HOM05D001723 ORTHO05D001706 4.6e-19 99.0 110 49.1
Haze_00907 Corylus avellana HOM05D001723 ORTHO05D001706 6.0e-19 98.6 110 50.0
Lj6A609T79 Lonicera japonica HOM05D001723 ORTHO05D001706 6.0e-19 98.6 119 48.7
HanXRQChr04g0110441 Helianthus annuus HOM05D001723 ORTHO05D001706 7.8e-19 98.2 112 46.4
Oeu023396.1 Olea europaea HOM05D001723 ORTHO05D001706 7.8e-19 98.2 120 45.0
TWI73G0550 Tripterygium wilfordii HOM05D001723 ORTHO05D001706 7.8e-19 98.2 110 50.9
GSVIVG01017967001 Vitis vinifera HOM05D001723 ORTHO05D001706 7.8e-19 98.2 112 49.1
Ciclev10005476m.g Citrus clementina HOM05D001723 ORTHO05D001706 1.7e-18 97.1 111 49.5
TWI09G0142 Tripterygium wilfordii HOM05D001723 ORTHO05D001706 2.3e-18 96.7 117 48.7
TAR362G0934 Trochodendron aralioides HOM05D001723 ORTHO05D001706 2.3e-18 96.7 131 44.3
MD13G1192300 Malus domestica HOM05D001723 ORTHO05D001706 3.0e-18 96.3 114 47.4
Aqoxy2G03381 Aquilegia oxysepala HOM05D001723 ORTHO05D001706 6.6e-18 95.1 111 48.6
Manes.15G028700 Manihot esculenta HOM05D001723 ORTHO05D001706 6.6e-18 95.1 118 44.1
Sc13g0004350 Simmondsia chinensis HOM05D001723 ORTHO05D001706 6.6e-18 95.1 119 43.7
Cfa015637 Carpinus fangiana HOM05D001723 ORTHO05D001706 8.7e-18 94.7 110 49.1
SalBow3G4500 Salvia bowleyana HOM05D001723 ORTHO05D001706 1.5e-17 94.0 108 46.3
COL.COLO4_04249 Corchorus olitorius HOM05D001723 ORTHO05D001706 3.3e-17 92.8 120 40.0
Peaxi162Scf00092g01118 Petunia axillaris HOM05D001723 ORTHO05D001706 3.3e-17 92.8 111 45.9
Gorai.N008600 Gossypium raimondii HOM05D001723 ORTHO05D001706 4.3e-17 92.4 120 39.2
Phvul.002G045800 Phaseolus vulgaris HOM05D001723 ORTHO05D001706 4.3e-17 92.4 107 45.8
Psat6g207840 Pisum sativum HOM05D001723 ORTHO05D001706 4.3e-17 92.4 107 44.9
CARHR221540 Cardamine hirsuta HOM05D001723 ORTHO05D001706 5.6e-17 92.0 110 48.2
Eucgr.B01087 Eucalyptus grandis HOM05D001723 ORTHO05D001706 5.6e-17 92.0 110 44.5
Nitab4.5_0000043g0200 Nicotiana tabacum HOM05D001723 ORTHO05D001706 5.6e-17 92.0 112 46.4
PSO761G0351 Papaver somniferum HOM05D001723 ORTHO05D001706 5.6e-17 92.0 132 43.2
Gohir.D09G055200 Gossypium hirsutum HOM05D001723 ORTHO05D001706 7.3e-17 91.7 120 39.2
Nitab4.5_0000321g0100 Nicotiana tabacum HOM05D001723 ORTHO05D001706 7.3e-17 91.7 111 48.6
Nitab4.5_0012971g0010 Nicotiana tabacum HOM05D001723 ORTHO05D001706 9.6e-17 91.3 111 45.9
CAN.G907.2 Capsicum annuum HOM05D001723 ORTHO05D001706 1.3e-16 90.9 111 46.8
CAN.G873.2 Capsicum annuum HOM05D001723 ORTHO05D001706 1.6e-16 90.5 119 44.5
Sopen09g030820 Solanum pennellii HOM05D001723 ORTHO05D001706 1.6e-16 90.5 111 46.8
ClCG05G005180 Citrullus lanatus HOM05D001723 ORTHO05D001706 2.8e-16 89.7 113 45.1
CsaV3_3G013340 Cucumis sativus L. HOM05D001723 ORTHO05D001706 2.8e-16 89.7 113 45.1
PGSC0003DMG400030079 Solanum tuberosum HOM05D001723 ORTHO05D001706 2.8e-16 89.7 111 45.9
AL7G40900 Arabidopsis lyrata HOM05D001723 ORTHO05D001706 3.6e-16 89.4 111 47.7
Nn1g02293 Nelumbo nucifera HOM05D001723 ORTHO05D001706 4.8e-16 89.0 137 39.4
AT4G14930 Arabidopsis thaliana HOM05D001723 ORTHO05D001706 8.1e-16 88.2 111 45.9
Cc03_g03720 Coffea canephora HOM05D001723 ORTHO05D001706 8.1e-16 88.2 120 42.5
QL06p002632 Quercus lobata HOM05D001723 ORTHO05D001706 1.1e-15 87.8 111 45.0
Sed0024117 Sechium edule HOM05D001723 ORTHO05D001706 1.1e-15 87.8 113 43.4
Aa31LG9G2390 Aethionema arabicum HOM05D001723 ORTHO05D001706 1.4e-15 87.4 129 44.2
Potri.010G088000 Populus trichocarpa HOM05D001723 ORTHO05D001706 1.4e-15 87.4 113 45.1
vmacro13039 Vaccinium macrocarpon HOM05D001723 ORTHO05D051541 1.8e-15 87.0 107 48.6
MELO3C006534.2 Cucumis melo HOM05D001723 ORTHO05D001706 2.4e-15 86.7 113 43.4
Glyma.01G238400 Glycine max HOM05D001723 ORTHO05D001706 3.1e-15 86.3 107 44.9
Medtr1g104500 Medicago truncatula HOM05D001723 ORTHO05D001706 4.0e-15 85.9 108 43.5
Gohir.A09G056000 Gossypium hirsutum HOM05D001723 ORTHO05D001706 5.3e-15 85.5 120 38.3
CiPaw.01G165400 Carya illinoinensis HOM05D001723 ORTHO05D001706 6.9e-15 85.1 113 44.2
DCAR_027213 Daucus carota HOM05D001723 ORTHO05D001706 6.9e-15 85.1 113 40.7
Lalb_Chr21g0304661 Lupinus albus HOM05D001723 ORTHO05D001706 6.9e-15 85.1 130 41.5
A08p11540 Brassica napus HOM05D001723 ORTHO05D001706 9.0e-15 84.7 111 46.8
DCAR_024152 Daucus carota HOM05D001723 ORTHO05D001706 9.0e-15 84.7 122 37.7
RcHm_v2.0_Chr4g0416341 Rosa chinensis HOM05D001723 ORTHO05D001706 9.0e-15 84.7 110 45.5
EL10Ac3g06419 Beta vulgaris HOM05D001723 ORTHO05D001706 1.2e-14 84.3 111 45.0
Lj3C737G2 Lonicera japonica HOM05D001723 ORTHO05D001706 1.2e-14 84.3 109 44.0
Potri.010G088100 Populus trichocarpa HOM05D001723 ORTHO05D001706 1.2e-14 84.3 110 44.5
VMungo1215G1889 Vigna mungo HOM05D001723 ORTHO05D001706 1.2e-14 84.3 113 45.1
BcaB04g18269 Brassica carinata HOM05D001723 ORTHO05D001706 1.5e-14 84.0 111 45.9
BraA08t33146Z Brassica rapa HOM05D001723 ORTHO05D001706 1.5e-14 84.0 111 45.9
Thhalv10025783m.g Eutrema salsugineum HOM05D001723 ORTHO05D001706 1.5e-14 84.0 110 46.4
Solyc06g054250.4 Solanum lycopersicum HOM05D001723 ORTHO05D001706 1.5e-14 84.0 111 41.4
THA.LOC104808540 Tarenaya hassleriana HOM05D001723 ORTHO05D001706 1.5e-14 84.0 109 45.0
Thecc.04G230900 Theobroma cacao HOM05D001723 ORTHO05D001706 1.5e-14 84.0 108 42.6
BcaC07g37861 Brassica carinata HOM05D001723 ORTHO05D001706 2.0e-14 83.6 111 46.8
BolC8t48252H Brassica oleracea HOM05D001723 ORTHO05D001706 2.0e-14 83.6 111 46.8
DCAR_024601 Daucus carota HOM05D001723 ORTHO05D001706 2.0e-14 83.6 120 39.2
Medtr5g006290 Medicago truncatula HOM05D001723 ORTHO05D001706 2.0e-14 83.6 108 45.4
Peaxi162Scf00192g01118 Petunia axillaris HOM05D001723 ORTHO05D001706 2.0e-14 83.6 120 44.2
FvH4_4g15450 Fragaria vesca HOM05D001723 ORTHO05D001706 3.4e-14 82.8 110 44.5
FAN12G0266 Fragaria x ananassa HOM05D001723 ORTHO05D001706 3.4e-14 82.8 110 44.5
FAN17G0924 Fragaria x ananassa HOM05D001723 ORTHO05D001706 3.4e-14 82.8 110 44.5
Nitab4.5_0008118g0040 Nicotiana tabacum HOM05D001723 ORTHO05D001706 4.5e-14 82.4 112 45.5
Sopen06g019370 Solanum pennellii HOM05D001723 ORTHO05D001706 5.8e-14 82.0 111 40.5
TPR.G5535 Trifolium pratense HOM05D001723 ORTHO05D001706 5.8e-14 82.0 108 41.7
Ca_10909_v3 Cicer arietinum L. HOM05D001723 ORTHO05D001706 9.9e-14 81.3 109 43.1
DCAR_002387 Daucus carota HOM05D001723 ORTHO05D001706 9.9e-14 81.3 115 43.5
Sabra10G0054800 Salix brachista HOM05D001723 ORTHO05D001706 9.9e-14 81.3 110 41.8
Ah.04g154540 Amaranthus hybridus HOM05D001723 ORTHO05D001706 1.3e-13 80.9 108 42.6
arahy.Tifrunner.gnm1.ann1.CNDQ24 Arachis hypogaea HOM05D001723 ORTHO05D001706 1.7e-13 80.5 107 43.0
LjContig00408g0025118 Lotus japonicus HOM05D001723 ORTHO05D001706 1.7e-13 80.5 110 45.5
unitig_748.g8542 Utricularia gibba HOM05D001723 ORTHO05D001706 2.2e-13 80.1 81 49.4
C01p28130 Brassica napus HOM05D001723 ORTHO05D001706 2.9e-13 79.7 112 43.8
Sp7g13080 Schrenkiella parvula HOM05D001723 ORTHO05D001706 2.9e-13 79.7 110 43.6
PGSC0003DMG400011823 Solanum tuberosum HOM05D001723 ORTHO05D001706 2.9e-13 79.7 111 39.6
FAN07G2576 Fragaria x ananassa HOM05D001723 ORTHO05D001706 3.8e-13 79.3 110 43.6
CAN.G873.8 Capsicum annuum HOM05D001723 ORTHO05D001706 6.4e-13 78.6 100 45.0
Lalb_Chr05g0210981 Lupinus albus HOM05D001723 ORTHO05D001706 4.2e-12 75.9 108 39.8
BraA01t02174Z Brassica rapa HOM05D001723 ORTHO05D001706 7.1e-12 75.1 115 42.6
Ca_24395_v3 Cicer arietinum L. HOM05D001723 ORTHO05D001706 2.7e-11 73.2 131 35.9
PGR004G2010 Punica granatum HOM05D001723 ORTHO05D001706 7.9e-11 71.6 109 38.5
Manes.03G179300 Manihot esculenta HOM05D001723 ORTHO05D001706 2.3e-10 70.1 133 34.6
BcaC09g50175 Brassica carinata HOM05D001723 ORTHO05D001706 3.0e-10 69.7 111 39.6
TPR.G37936 Trifolium pratense HOM05D001723 ORTHO05D001706 6.7e-10 68.6 120 40.0
HanXRQChr16g0513011 Helianthus annuus HOM05D001723 ORTHO05D001706 1.5e-09 67.4 127 36.2
Atru.chr4.2474 Acer truncatum HOM05D001723 ORTHO05D001706 4.8e-08 62.4 107 36.4
Atru.ctg752_3.87 Acer truncatum HOM05D001723 ORTHO05D001706 1.1e-07 61.2 59 54.2
DCAR_030634 Daucus carota HOM05D001723 ORTHO05D001706 1.1e-07 61.2 109 35.8
Solyc09g075990.3 Solanum lycopersicum HOM05D001723 ORTHO05D001706 1.1e-07 61.2 64 54.7
Os07g0204500 Oryza sativa ssp. japonica HOM05D001723 ORTHO05D001706 1.8e-07 60.5 110 36.4
Atru.chr4.2473 Acer truncatum HOM05D001723 ORTHO05D001706 3.4e-06 56.2 39 66.7
Solyc06g054240.3 Solanum lycopersicum HOM05D001723 ORTHO05D001706 3.4e-06 56.2 113 33.6
vmacro13032 Vaccinium macrocarpon HOM05D001723 ORTHO05D426690 7.6e-06 55.1 26 80.8


User provided reference genes

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