Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 0.0e+00 1228.4 649 100.0
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 7.0e-308 1060.1 651 87.6
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.5e-289 999.2 652 82.1
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.0e-275 950.7 654 78.4
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.5e-273 946.0 654 78.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 6.0e-267 924.1 654 76.1
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 8.7e-258 893.6 662 73.1
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.3e-250 869.8 652 71.6
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 6.9e-247 857.4 654 70.8
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 4.5e-246 854.7 644 71.9
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.8e-245 851.7 654 70.6
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.3e-242 843.2 653 70.9
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 3.0e-242 842.0 650 70.6
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 6.7e-242 840.9 654 69.4
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 1.6e-240 836.3 663 68.3
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.8e-239 832.8 655 68.9
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 3.8e-237 825.1 653 69.7
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 2.5e-236 822.4 675 67.4
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 1.2e-235 820.1 671 65.4
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.1e-235 819.3 644 69.7
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 3.5e-235 818.5 655 69.9
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 3.0e-234 815.5 671 65.4
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 8.7e-234 813.9 671 65.1
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 2.5e-233 812.4 668 65.9
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 8.2e-232 807.4 664 66.7
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 8.2e-232 807.4 680 66.3
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 3.1e-231 805.4 678 66.2
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 2.9e-229 798.9 669 64.6
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 3.8e-229 798.5 673 66.3
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 8.5e-229 797.3 671 64.7
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 4.2e-228 795.0 653 67.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 4.2e-228 795.0 657 66.4
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.6e-227 793.1 655 67.2
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.6e-227 791.6 669 64.4
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.0e-226 790.4 665 66.9
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.4e-226 790.0 651 67.1
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.8e-226 789.6 652 67.2
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-225 786.9 655 66.4
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 7.4e-225 784.3 669 65.6
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 7.4e-225 784.3 669 65.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 7.4e-225 784.3 665 65.7
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.7e-224 783.1 650 65.8
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 8.2e-224 780.8 644 66.6
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.8e-223 779.6 653 66.3
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 2.4e-223 779.2 641 66.3
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 2.4e-223 779.2 676 63.0
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.2e-222 776.9 660 64.5
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 2.6e-222 775.8 645 65.7
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.7e-221 773.1 644 66.3
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 2.2e-221 772.7 655 65.2
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.2e-221 772.7 658 65.5
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 5.0e-221 771.5 661 63.7
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 8.5e-221 770.8 644 65.4
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.1e-219 766.1 655 66.0
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.8e-218 763.1 655 63.5
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.8e-218 763.1 655 63.5
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.8e-218 763.1 642 63.7
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 2.3e-218 762.7 641 63.3
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.0e-217 759.6 672 63.1
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 2.6e-217 759.2 656 64.0
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 5.7e-217 758.1 670 62.8
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 7.4e-217 757.7 649 63.5
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.2e-214 750.4 655 64.6
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.0e-213 747.3 643 63.0
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 3.2e-212 742.3 631 64.8
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 4.7e-211 738.4 472 80.1
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 6.7e-210 734.6 606 66.8
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 4.4e-209 731.9 652 63.0
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.4e-207 726.9 579 68.6
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 7.0e-207 724.5 656 61.4
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.2e-206 723.8 643 62.7
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 2.5e-204 716.1 666 60.5
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 7.2e-204 714.5 671 59.2
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.7e-203 712.6 652 59.7
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 8.8e-202 707.6 651 61.6
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 8.8e-202 707.6 654 61.6
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.2e-201 707.2 655 60.5
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 4.4e-201 705.3 651 60.7
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 4.4e-201 705.3 645 61.6
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.7e-200 702.2 662 60.0
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.5e-198 695.3 630 61.6
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.9e-197 692.6 651 60.1
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 5.0e-197 691.8 655 60.2
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 1.9e-196 689.9 644 61.2
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 5.4e-191 671.8 671 56.5
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 6.6e-189 664.8 655 60.3
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 8.6e-189 664.5 658 58.7
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.5e-188 663.7 668 55.8
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 2.3e-186 656.4 670 54.8
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 7.5e-185 651.4 674 54.9
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 6.4e-184 648.3 671 54.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 9.2e-183 644.4 670 54.2
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 5.9e-182 641.7 670 53.7
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 9.5e-180 634.4 676 53.6
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 3.4e-177 625.9 679 53.6
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 4.4e-177 625.5 683 53.1
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 3.7e-176 622.5 622 57.9
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 4.1e-175 619.0 679 53.0
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 5.4e-175 618.6 683 52.6
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 3.9e-149 532.7 656 52.1
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.5e-140 503.4 688 45.5
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 2.3e-133 480.3 683 42.2
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 3.1e-130 469.9 627 46.7
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.5e-129 466.1 365 70.4
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 7.6e-129 465.3 555 48.1
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.4e-127 461.1 702 41.0
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 2.6e-121 440.3 308 78.2
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 3.3e-116 423.3 641 40.1
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 6.9e-106 389.0 331 63.1
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 5.9e-105 386.0 339 62.2
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.0e-104 385.2 310 67.7
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 9.1e-82 308.9 244 67.2
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.2e-78 298.5 610 33.9
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 2.5e-55 221.1 242 50.4
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 7.3e-47 193.0 330 39.7
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 3.1e-45 187.6 267 43.4
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.1e-45 187.6 220 45.5
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 2.5e-31 141.4 357 31.1
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.2e-19 101.7 178 36.0
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 3.1e-13 81.3 87 54.0
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.7e-11 75.5 122 44.3
A06p28820 Brassica napus HOM05D003696 ORTHO05D016804 6.3e-06 57.0 164 32.3
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 6.3e-06 57.0 316 24.1


User provided reference genes

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