Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 3.3e-95 351.7 176 100.0
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 5.2e-24 115.2 65 83.1
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 3.9e-19 99.0 65 72.3
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 1.5e-18 97.1 63 69.8
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 1.5e-18 97.1 81 60.5
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 1.6e-17 93.6 68 67.6
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 1.6e-17 93.6 68 67.6
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 1.6e-17 93.6 71 66.2
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 1.6e-17 93.6 54 81.5
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 4.8e-17 92.0 64 68.8
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 1.1e-16 90.9 70 60.0
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 1.1e-16 90.9 125 44.8
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 1.8e-16 90.1 120 44.2
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 2.4e-16 89.7 96 52.1
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 4.0e-16 89.0 57 68.4
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 4.0e-16 89.0 72 58.3
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 5.3e-16 88.6 74 58.1
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 6.9e-16 88.2 101 46.5
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 6.9e-16 88.2 56 71.4
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 6.9e-16 88.2 74 59.5
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 6.9e-16 88.2 70 60.0
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 1.5e-15 87.0 75 57.3
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.5e-15 87.0 75 57.3
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 1.5e-15 87.0 51 76.5
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 1.5e-15 87.0 78 59.0
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 2.0e-15 86.7 67 58.2
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 2.0e-15 86.7 56 69.6
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 2.0e-15 86.7 56 69.6
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 2.0e-15 86.7 67 59.7
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 2.0e-15 86.7 60 68.3
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 2.6e-15 86.3 78 51.3
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 2.6e-15 86.3 109 45.0
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 2.6e-15 86.3 72 59.7
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 3.4e-15 85.9 56 67.9
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 3.4e-15 85.9 72 58.3
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 4.5e-15 85.5 69 60.9
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 4.5e-15 85.5 61 63.9
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 7.6e-15 84.7 74 56.8
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 9.9e-15 84.3 58 65.5
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 9.9e-15 84.3 61 63.9
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 9.9e-15 84.3 61 65.6
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.3e-14 84.0 56 66.1
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 1.3e-14 84.0 53 69.8
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-14 84.0 57 66.7
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-14 84.0 57 66.7
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-14 84.0 57 66.7
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-14 84.0 57 66.7
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.7e-14 83.6 50 76.0
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.7e-14 83.6 50 76.0
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 1.7e-14 83.6 50 76.0
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 2.2e-14 83.2 69 62.3
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 4.9e-14 82.0 96 49.0
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 6.4e-14 81.6 63 61.9
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 8.4e-14 81.3 59 61.0
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.4e-13 80.5 61 60.7
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.9e-13 80.1 47 70.2
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 1.9e-13 80.1 89 48.3
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 2.4e-13 79.7 51 70.6
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 2.4e-13 79.7 121 44.6
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 7.1e-13 78.2 76 51.3
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 7.1e-13 78.2 56 60.7
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 7.1e-13 78.2 54 68.5
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 7.1e-13 78.2 48 72.9
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 1.6e-12 77.0 65 58.5
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 2.7e-12 76.3 62 54.8
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 2.7e-12 76.3 66 57.6
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 4.6e-12 75.5 60 61.7
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 4.6e-12 75.5 68 48.5
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 4.6e-12 75.5 111 36.9
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 1.0e-11 74.3 58 55.2
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 2.3e-11 73.2 56 57.1
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 5.1e-11 72.0 44 65.9
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 8.7e-11 71.2 55 58.2
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 2.1e-09 66.6 36 77.8
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 8.1e-09 64.7 48 52.1
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 1.4e-08 63.9 36 75.0
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 2.4e-08 63.2 36 72.2
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 1.5e-07 60.5 64 43.8
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 1.5e-07 60.5 46 52.2
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 9.9e-07 57.8 42 61.9
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.3e-06 57.4 36 72.2
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 2.9e-06 56.2 33 72.7
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 6.4e-06 55.1 42 64.3


User provided reference genes

Program Settings