Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 0.0e+00 1746.9 900 100.0
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 1.0e-293 1013.4 864 65.5
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 2.5e-218 763.1 832 52.8
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 6.3e-174 615.5 759 47.0
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 3.8e-171 606.3 841 44.0
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.2e-164 584.7 791 44.0
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 2.5e-162 577.0 843 43.5
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 8.9e-160 568.5 782 43.6
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 2.0e-159 567.4 783 43.3
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.9e-158 563.5 748 44.1
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 7.8e-156 555.4 855 42.0
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 9.5e-154 548.5 783 43.3
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 3.4e-151 540.0 762 43.6
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 4.9e-150 536.2 853 41.0
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 4.9e-150 536.2 770 42.5
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 8.3e-150 535.4 785 41.7
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 5.4e-149 532.7 780 41.8
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 7.0e-149 532.3 821 41.0
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 4.6e-148 529.6 559 53.3
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 1.0e-147 528.5 755 41.9
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.3e-147 528.1 755 42.0
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 1.7e-147 527.7 754 41.6
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 1.6e-145 521.2 755 41.9
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.1e-144 518.5 740 45.0
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 3.1e-144 516.9 782 40.2
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.5e-143 514.6 765 41.2
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 3.7e-142 510.0 776 42.5
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 4.9e-142 509.6 751 41.1
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 2.4e-141 507.3 756 42.9
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 4.1e-141 506.5 755 40.3
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 1.2e-140 505.0 570 51.2
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 7.8e-140 502.3 760 40.4
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.1e-138 498.4 839 40.0
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 1.5e-138 498.0 758 40.8
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.5e-138 497.3 751 39.7
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.1e-136 491.9 751 39.5
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 4.0e-136 490.0 753 39.0
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 4.0e-136 490.0 751 42.2
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 2.6e-135 487.3 746 40.6
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 1.3e-134 485.0 617 44.7
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 1.4e-133 481.5 752 40.7
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 3.5e-132 476.9 758 40.4
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 1.0e-131 475.3 762 39.5
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 2.5e-130 470.7 756 38.1
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 4.3e-130 469.9 737 39.2
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 3.6e-129 466.8 765 37.3
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 3.1e-128 463.8 870 36.4
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 6.9e-128 462.6 785 38.7
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 6.0e-124 449.5 800 37.6
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 1.3e-123 448.4 800 37.6
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 5.1e-123 446.4 637 40.7
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.5e-119 434.9 710 38.6
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 7.6e-119 432.6 745 38.4
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 8.4e-118 429.1 559 44.7
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 4.6e-116 423.3 750 39.1
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 1.0e-115 422.2 819 37.6
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 3.3e-114 417.2 558 44.6
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 3.3e-114 417.2 747 37.1
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 2.1e-113 414.5 526 43.7
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 6.4e-110 402.9 768 35.0
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 4.3e-106 390.2 537 43.6
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.8e-103 379.8 538 41.6
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 6.3e-97 359.8 508 41.3
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 1.4e-96 358.6 524 40.3
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.9e-93 348.2 398 51.0
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 1.1e-90 339.0 762 32.9
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 4.7e-84 317.0 528 36.9
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 2.4e-72 278.1 538 34.6
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 7.7e-71 273.1 259 54.4
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.2e-69 267.7 761 30.4
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 3.3e-66 257.7 398 39.7
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.8e-65 254.6 394 38.6
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 4.0e-59 234.2 805 27.3
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 2.5e-53 214.9 828 27.8
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 6.1e-52 210.3 557 31.1
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 2.8e-49 201.4 246 44.7
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 6.6e-46 190.3 298 40.3
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.5e-39 167.9 212 48.1
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 7.5e-34 150.2 136 51.5
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.9e-33 148.3 256 35.9
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 3.2e-32 144.8 132 54.5
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 9.2e-24 116.7 132 41.7
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 3.0e-22 111.7 252 35.7
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 4.3e-21 107.8 95 51.6
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 3.4e-18 98.2 117 47.0
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 1.9e-16 92.4 102 57.8
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.4e-11 76.3 67 49.3
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 9.9e-10 70.1 194 30.9
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 9.9e-10 70.1 111 41.4
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 2.2e-09 68.9 112 33.9
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 2.2e-09 68.9 89 43.8
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 2.2e-09 68.9 112 37.5
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 3.8e-09 68.2 110 38.2
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 4.9e-09 67.8 248 25.8
HPP92_010781 Vanilla planifolia HOM05D007669 ORTHO05D009624 6.4e-09 67.4 96 42.7
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 2.4e-08 65.5 116 36.2
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 1.6e-07 62.8 95 36.8


User provided reference genes

Program Settings