Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 2.2e-67 258.8 131 100.0
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 3.4e-36 155.2 87 93.1
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.6e-30 136.3 87 83.9
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 2.1e-30 136.0 87 80.5
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 2.8e-30 135.6 87 83.9
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 3.6e-30 135.2 89 83.1
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 4.8e-30 134.8 87 79.3
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 8.1e-30 134.0 86 79.1
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.4e-29 133.3 87 79.3
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.4e-29 133.3 85 77.6
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.8e-29 132.9 93 75.3
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.8e-29 132.9 87 79.3
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.1e-29 132.1 86 77.9
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 4.0e-29 131.7 87 80.5
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 4.0e-29 131.7 87 79.3
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 5.3e-29 131.3 87 75.9
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 6.9e-29 131.0 87 82.8
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.2e-28 130.2 90 76.7
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.2e-28 130.2 87 77.0
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.0e-28 129.4 87 77.0
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 2.6e-28 129.0 87 74.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 2.6e-28 129.0 127 59.1
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 3.4e-28 128.6 87 81.6
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 3.4e-28 128.6 87 81.6
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 3.4e-28 128.6 87 74.7
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 3.4e-28 128.6 83 80.7
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 4.5e-28 128.3 87 75.9
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 7.6e-28 127.5 85 78.8
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 7.6e-28 127.5 78 82.1
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 9.9e-28 127.1 87 75.9
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 9.9e-28 127.1 87 78.2
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.3e-27 126.7 87 79.3
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 1.3e-27 126.7 87 78.2
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 1.7e-27 126.3 85 78.8
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.7e-27 126.3 85 72.9
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.2e-27 125.9 109 67.9
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 2.9e-27 125.6 83 77.1
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 4.9e-27 124.8 87 73.6
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 4.9e-27 124.8 86 77.9
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 4.9e-27 124.8 87 78.2
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 6.4e-27 124.4 85 77.6
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.4e-27 124.0 87 75.9
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 1.4e-26 123.2 85 75.3
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.9e-26 122.9 83 74.7
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.9e-26 122.9 87 77.0
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 3.2e-26 122.1 82 78.0
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 3.2e-26 122.1 81 81.5
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 4.2e-26 121.7 87 71.3
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 5.5e-26 121.3 82 72.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 5.5e-26 121.3 81 81.5
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 7.1e-26 120.9 73 84.9
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 7.1e-26 120.9 87 72.4
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 7.1e-26 120.9 84 77.4
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 9.3e-26 120.6 81 79.0
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.2e-25 120.2 82 72.0
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.2e-25 120.2 82 72.0
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.6e-25 119.8 83 71.1
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.6e-25 119.8 87 77.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 2.1e-25 119.4 82 73.2
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.1e-25 119.4 83 74.7
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.1e-25 119.4 86 73.3
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 4.6e-25 118.2 82 70.7
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 6.0e-25 117.9 90 68.9
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 7.9e-25 117.5 108 59.3
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 7.9e-25 117.5 82 73.2
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 7.9e-25 117.5 86 73.3
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.0e-24 117.1 82 70.7
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.0e-24 117.1 82 70.7
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.0e-24 117.1 76 80.3
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.0e-24 117.1 81 70.4
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 2.3e-24 115.9 82 70.7
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.3e-24 115.9 82 69.5
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 2.3e-24 115.9 118 59.3
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 3.0e-24 115.5 69 85.5
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 5.1e-24 114.8 82 69.5
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 6.7e-24 114.4 82 68.3
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 6.7e-24 114.4 97 66.0
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 6.7e-24 114.4 86 72.1
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 6.7e-24 114.4 85 71.8
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 8.7e-24 114.0 113 57.5
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.1e-23 113.6 111 58.6
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 1.1e-23 113.6 86 70.9
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 1.9e-23 112.8 72 83.3
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 1.9e-23 112.8 86 66.3
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 2.5e-23 112.5 86 70.9
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 7.4e-23 110.9 72 80.6
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.3e-22 110.2 76 76.3
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.1e-22 109.4 83 66.3
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 6.2e-22 107.8 78 79.5
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 8.1e-22 107.5 82 68.3
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 8.1e-22 107.5 77 71.4
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.1e-21 107.1 116 54.3
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.1e-21 107.1 75 72.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.4e-21 106.7 83 65.1
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.1e-21 105.5 74 77.0
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 2.6e-20 102.4 66 83.3
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 4.5e-20 101.7 66 83.3
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.3e-19 100.1 71 73.2
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.1e-18 97.1 68 76.5
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.2e-17 93.6 71 71.8
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 3.5e-17 92.0 68 72.1
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 6.0e-17 91.3 74 63.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.0e-16 90.5 82 53.7
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.3e-16 90.1 91 49.5
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 3.7e-14 82.0 49 79.6
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.1e-13 80.5 57 64.9
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 9.0e-13 77.4 83 45.8


User provided reference genes

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