Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro13058 Vaccinium macrocarpon HOM05D010128 ORTHO05D010651 6.8e-108 394.0 203 100.0
Rhsim01G0012600 Rhododendron simsii HOM05D010128 ORTHO05D010651 1.2e-72 276.9 203 71.4
Actinidia20953 Actinidia chinensis HOM05D010128 ORTHO05D010651 3.4e-35 152.5 118 70.3
Hma1.2p1_0156F.1_g068710 Hydrangea macrophylla HOM05D010128 ORTHO05D010651 1.0e-31 141.0 189 46.0
Hma1.2p1_1495F.1_g287015 Hydrangea macrophylla HOM05D010128 ORTHO05D010651 1.0e-31 141.0 189 46.0
Prupe.1G097900 Prunus persica HOM05D010128 ORTHO05D010651 1.3e-29 134.0 193 44.6
Dinv41308 Davidia involucrata HOM05D010128 ORTHO05D010651 6.1e-24 115.2 95 64.2
RcHm_v2.0_Chr4g0404981 Rosa chinensis HOM05D021120 ORTHO05D010651 3.3e-22 109.4 203 41.9
MD16G1262100 Malus domestica HOM05D010128 ORTHO05D010651 2.4e-20 103.2 172 40.1
Dinv42788 Davidia involucrata HOM05D020211 ORTHO05D010651 1.3e-18 97.4 177 39.5
Dinv43313 Davidia involucrata HOM05D020211 ORTHO05D010651 1.3e-18 97.4 177 39.5
HanXRQChr10g0306491 Helianthus annuus HOM05D010128 ORTHO05D010651 2.1e-16 90.1 175 37.1
Cfa013552 Carpinus fangiana HOM05D010128 ORTHO05D010651 4.6e-16 89.0 204 35.3
Lj4g0027931 Lotus japonicus HOM05D013619 ORTHO05D010651 3.0e-15 86.3 179 35.8
Nitab4.5_0002587g0110 Nicotiana tabacum HOM05D017105 ORTHO05D010651 1.5e-14 84.0 116 43.1
TWI63G0720 Tripterygium wilfordii HOM05D010128 ORTHO05D010651 2.0e-14 83.6 225 30.7
Glyma.13G091300 Glycine max HOM05D013619 ORTHO05D010651 2.8e-13 79.7 178 34.8
Peaxi162Scf00297g00086 Petunia axillaris HOM05D017105 ORTHO05D010651 1.1e-12 77.8 161 36.0
Atru.chr7.481 Acer truncatum HOM05D020161 ORTHO05D026266 1.4e-12 77.4 199 30.7
QL02p095556 Quercus lobata HOM05D010128 ORTHO05D010651 1.8e-12 77.0 192 34.9
Lsat_1_v5_gn_5_87400 Lactuca sativa HOM05D010128 ORTHO05D010651 2.4e-12 76.6 195 33.3
Ca_21171_v3 Cicer arietinum L. HOM05D013619 ORTHO05D010651 4.1e-12 75.9 189 32.8
CSS0035822 Camellia sinensis var. sinensis HOM05D020211 ORTHO05D010651 9.1e-12 74.7 73 60.3
Peaxi162Scf00525g00819 Petunia axillaris HOM05D017105 ORTHO05D010651 1.2e-11 74.3 136 36.8
GSVIVG01023741001 Vitis vinifera HOM05D020211 ORTHO05D010651 2.0e-11 73.6 197 31.5
Medtr4g129620 Medicago truncatula HOM05D013619 ORTHO05D010651 4.5e-11 72.4 193 34.2
Potri.006G177250 Populus trichocarpa HOM05D010128 ORTHO05D010651 2.2e-10 70.1 158 34.2
Cc06_g14070 Coffea canephora HOM05D017105 ORTHO05D010651 3.8e-10 69.3 220 30.0
FAN20G0495 Fragaria x ananassa HOM05D000448 ORTHO05D000291 8.5e-10 68.2 183 32.8
Potri.018G099301 Populus trichocarpa HOM05D010128 ORTHO05D010651 5.5e-09 65.5 178 32.0
AL8G33830 Arabidopsis lyrata HOM05D010951 ORTHO05D012959 1.6e-08 63.9 185 33.0
Nitab4.5_0007380g0030 Nicotiana tabacum HOM05D017105 ORTHO05D010651 2.7e-08 63.2 116 37.1
Ciclev10010184m.g Citrus clementina HOM05D010128 ORTHO05D010651 3.6e-08 62.8 99 42.4
AT5G57790 Arabidopsis thaliana HOM05D010951 ORTHO05D012959 4.7e-08 62.4 167 35.3
CARHR271530 Cardamine hirsuta HOM05D010951 ORTHO05D012959 1.0e-07 61.2 115 37.4
Psat4g010360 Pisum sativum HOM05D013619 ORTHO05D010651 1.8e-07 60.5 185 32.4
PSO210G4251 Papaver somniferum HOM05D010128 ORTHO05D010651 2.3e-07 60.1 126 33.3
Sp6g19470 Schrenkiella parvula HOM05D010951 ORTHO05D012959 3.0e-07 59.7 180 31.7
TPR.G5347 Trifolium pratense HOM05D013619 ORTHO05D010651 3.0e-07 59.7 196 29.1
FAN15G2502 Fragaria x ananassa HOM05D021120 ORTHO05D010651 3.9e-07 59.3 190 31.6
Manes.14G147800 Manihot esculenta HOM05D010128 ORTHO05D010651 3.9e-07 59.3 209 31.1
Nn2g12550 Nelumbo nucifera HOM05D010128 ORTHO05D034267 3.9e-07 59.3 90 41.1
ECA234G3023 Erigeron canadensis HOM05D010128 ORTHO05D010651 6.7e-07 58.5 177 29.9
BraA03t10574Z Brassica rapa HOM05D010951 ORTHO05D012959 8.8e-07 58.2 123 37.4
Gohir.A13G207550 Gossypium hirsutum HOM05D020161 ORTHO05D026266 1.1e-06 57.8 204 29.4
THA.LOC104817813 Tarenaya hassleriana HOM05D010951 ORTHO05D012959 1.5e-06 57.4 118 38.1
TAR625G0749 Trochodendron aralioides HOM05D020211 ORTHO05D010651 1.5e-06 57.4 68 51.5
A03p12590 Brassica napus HOM05D010951 ORTHO05D012959 2.0e-06 57.0 125 36.8
Gorai.013G242300 Gossypium raimondii HOM05D020161 ORTHO05D026266 2.0e-06 57.0 204 28.4
VMungo1215G1187 Vigna mungo HOM05D013619 ORTHO05D010651 7.4e-06 55.1 219 29.2
Gohir.D13G212000 Gossypium hirsutum HOM05D020161 ORTHO05D026266 9.7e-06 54.7 204 28.9
Sopen12g005640 Solanum pennellii HOM05D017105 ORTHO05D010651 9.7e-06 54.7 180 28.3


User provided reference genes

Program Settings