Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12958 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 6.1e-135 484.2 249 100.0
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 4.6e-50 202.2 166 63.9
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 4.6e-50 202.2 167 64.1
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 8.2e-47 191.4 161 62.1
Actinidia28235 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.2e-44 183.3 165 61.2
Rhsim10G0163100 Rhododendron simsii HOM05D001481 ORTHO05D001865 2.8e-39 166.4 130 69.2
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 1.2e-37 161.0 162 56.2
Rhsim08G0010800 Rhododendron simsii HOM05D005812 ORTHO05D007232 2.6e-37 159.8 169 53.3
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 2.1e-34 150.2 170 54.1
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 3.0e-33 146.4 169 48.5
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 9.7e-32 141.4 166 49.4
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla HOM05D005812 ORTHO05D007232 2.2e-31 140.2 169 52.1
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 1.9e-27 127.1 169 47.3
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 1.2e-26 124.4 169 42.0
MSTRG.3778 Avicennia marina HOM05D005812 ORTHO05D007232 1.4e-25 120.9 161 44.1
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 1.4e-25 120.9 165 44.2
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 3.0e-25 119.8 176 46.0
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 3.0e-25 119.8 169 46.2
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 3.9e-25 119.4 166 41.6
DCAR_014222 Daucus carota HOM05D005812 ORTHO05D007232 5.1e-25 119.0 165 45.5
Haze_24926 Corylus avellana HOM05D005812 ORTHO05D007232 1.5e-24 117.5 172 45.9
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 5.7e-24 115.5 160 41.2
MSTRG.15713 Avicennia marina HOM05D005812 ORTHO05D007232 4.8e-23 112.5 162 41.4
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 1.1e-22 111.3 162 41.4
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 1.8e-22 110.5 165 41.8
Cc07_g15160 Coffea canephora HOM05D005812 ORTHO05D007232 7.0e-22 108.6 168 39.3
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 7.0e-22 108.6 161 41.6
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 9.1e-22 108.2 163 42.3
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 1.2e-21 107.8 176 43.2
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 7.7e-21 105.1 157 40.8
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 7.7e-21 105.1 157 43.9
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.3e-20 104.4 158 39.2
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.3e-20 104.4 158 39.2
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 1.7e-20 104.0 158 38.6
Migut.L00124 Erythranthe guttata HOM05D005812 ORTHO05D007232 1.7e-20 104.0 158 43.7
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 2.2e-20 103.6 184 35.3
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 2.9e-20 103.2 162 40.7
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 3.8e-20 102.8 165 37.6
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 3.8e-20 102.8 164 39.0
Oeu051807.1 Olea europaea HOM05D005812 ORTHO05D007232 8.5e-20 101.7 133 45.1
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 1.1e-19 101.3 183 38.3
Lsat_1_v5_gn_4_141220 Lactuca sativa HOM05D005812 ORTHO05D007232 1.1e-19 101.3 167 41.9
Lj2C549G6 Lonicera japonica HOM05D005812 ORTHO05D007232 1.1e-19 101.3 108 55.6
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 1.9e-19 100.5 178 38.8
ECA232G1467 Erigeron canadensis HOM05D005812 ORTHO05D007232 2.5e-19 100.1 164 42.7
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 2.5e-19 100.1 165 39.4
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.2e-19 99.8 198 35.4
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 3.2e-19 99.8 164 38.4
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 7.2e-19 98.6 163 39.9
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 9.4e-19 98.2 165 38.8
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 9.4e-19 98.2 166 39.8
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.2e-18 97.8 158 38.6
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 2.7e-18 96.7 168 38.7
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 2.7e-18 96.7 168 38.7
MSTRG.2569 Avicennia marina HOM05D005812 ORTHO05D007232 2.7e-18 96.7 158 40.5
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 2.7e-18 96.7 159 39.6
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 2.7e-18 96.7 158 39.9
SalBow5G0456 Salvia bowleyana HOM05D005812 ORTHO05D007232 4.7e-18 95.9 160 36.2
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 6.1e-18 95.5 196 35.2
Aqoxy6G00789 Aquilegia oxysepala HOM05D005812 ORTHO05D007232 1.0e-17 94.7 170 39.4
Sc03g0002070 Simmondsia chinensis HOM05D005812 ORTHO05D007232 1.0e-17 94.7 165 39.4
Nitab4.5_0000083g0250 Nicotiana tabacum HOM05D005812 ORTHO05D007232 1.8e-17 94.0 165 38.8
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 2.3e-17 93.6 174 33.3
HanXRQChr05g0145211 Helianthus annuus HOM05D005812 ORTHO05D007232 2.3e-17 93.6 122 44.3
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.0e-17 93.2 158 38.6
Oeu001791.1 Olea europaea HOM05D005812 ORTHO05D007232 5.2e-17 92.4 111 50.5
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 2.0e-16 90.5 156 39.1
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 2.6e-16 90.1 167 38.3
Peaxi162Scf00212g00413 Petunia axillaris HOM05D005812 ORTHO05D007232 3.3e-16 89.7 169 37.3
Solyc04g055250.4 Solanum lycopersicum HOM05D005812 ORTHO05D007232 3.3e-16 89.7 165 36.4
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 4.4e-16 89.4 167 37.1
PGSC0003DMG400001876 Solanum tuberosum HOM05D005812 ORTHO05D007232 4.4e-16 89.4 169 34.9
Sopen04g025100 Solanum pennellii HOM05D005812 ORTHO05D007232 9.7e-16 88.2 165 35.8
Sed0017830 Sechium edule HOM05D005812 ORTHO05D007232 1.7e-15 87.4 152 36.8
ECA232G0795 Erigeron canadensis HOM05D005812 ORTHO05D007232 2.2e-15 87.0 167 37.7
Nitab4.5_0004651g0010 Nicotiana tabacum HOM05D005812 ORTHO05D007232 2.2e-15 87.0 165 36.4
Nn5g30114 Nelumbo nucifera HOM05D005812 ORTHO05D007232 3.7e-15 86.3 167 37.1
unitig_88.g27721 Utricularia gibba HOM05D005812 ORTHO05D007232 4.8e-15 85.9 160 39.4
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 8.2e-15 85.1 152 36.2
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.4e-14 84.3 156 35.9
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 1.4e-14 84.3 163 35.0
HanXRQChr10g0305381 Helianthus annuus HOM05D005812 ORTHO05D007232 2.4e-14 83.6 160 36.9
Sp7g35990 Schrenkiella parvula HOM05D005812 ORTHO05D007232 2.4e-14 83.6 191 34.6
Carub.0007s0184 Capsella rubella HOM05D005812 ORTHO05D007232 5.3e-14 82.4 191 34.0
AT4G39900 Arabidopsis thaliana HOM05D005812 ORTHO05D007232 7.0e-14 82.0 191 34.0
Thhalv10026058m.g Eutrema salsugineum HOM05D005812 ORTHO05D007232 7.0e-14 82.0 191 34.0
TWI74G1407 Tripterygium wilfordii HOM05D005812 ORTHO05D007232 9.1e-14 81.6 129 38.0
Sabra07G0077200 Salix brachista HOM05D005812 ORTHO05D007232 1.2e-13 81.3 122 33.6
DCAR_010089 Daucus carota HOM05D005812 ORTHO05D007232 1.6e-13 80.9 146 38.4
AUR62003797 Chenopodium quinoa HOM05D005812 ORTHO05D007232 2.6e-13 80.1 161 33.5
Nitab4.5_0000897g0060 Nicotiana tabacum HOM05D005812 ORTHO05D007232 2.6e-13 80.1 159 35.8
AUR62002005 Chenopodium quinoa HOM05D005812 ORTHO05D007232 5.9e-13 79.0 132 37.9
PSO781G0022 Papaver somniferum HOM05D005812 ORTHO05D007232 5.9e-13 79.0 166 36.1
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 7.7e-13 78.6 168 32.1
PSO541G0090 Papaver somniferum HOM05D005812 ORTHO05D007232 7.7e-13 78.6 192 33.9
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 1.0e-12 78.2 168 32.1
CAN.G18.16 Capsicum annuum HOM05D005812 ORTHO05D007232 1.0e-12 78.2 133 37.6
MSTRG.23345 Avicennia marina HOM05D005812 ORTHO05D007232 2.2e-12 77.0 169 34.9
BcaNung06391 Brassica carinata HOM05D005812 ORTHO05D007232 2.2e-12 77.0 162 35.8
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 2.2e-12 77.0 166 34.3
CARHR246800 Cardamine hirsuta HOM05D005812 ORTHO05D007232 2.2e-12 77.0 191 31.9
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 2.9e-12 76.6 166 34.3
A01p00790 Brassica napus HOM05D005812 ORTHO05D007232 2.9e-12 76.6 164 32.3
BraA01t00082Z Brassica rapa HOM05D005812 ORTHO05D007232 2.9e-12 76.6 164 32.3
CAN.G18.15 Capsicum annuum HOM05D005812 ORTHO05D007232 2.9e-12 76.6 133 36.8
Hund16289 Selenicereus undatus HOM05D005812 ORTHO05D007232 2.9e-12 76.6 169 34.9
THA.LOC104807691 Tarenaya hassleriana HOM05D005812 ORTHO05D007232 2.9e-12 76.6 163 36.8
Ah.02g122540 Amaranthus hybridus HOM05D005812 ORTHO05D007232 3.8e-12 76.3 166 33.1
C01p00910 Brassica napus HOM05D005812 ORTHO05D007232 3.8e-12 76.3 171 31.6
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 3.8e-12 76.3 163 33.7
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 5.0e-12 75.9 168 31.5
BcaNung00911 Brassica carinata HOM05D005812 ORTHO05D007232 8.5e-12 75.1 172 31.4
AL7G12150 Arabidopsis lyrata HOM05D005812 ORTHO05D007232 1.5e-11 74.3 157 36.9
HanXRQChr09g0254761 Helianthus annuus HOM05D005812 ORTHO05D007232 1.5e-11 74.3 163 37.4
SalBow5G2541 Salvia bowleyana HOM05D005812 ORTHO05D007232 3.2e-11 73.2 98 43.9
BcaB03g12290 Brassica carinata HOM05D005812 ORTHO05D007232 9.4e-11 71.6 163 31.9
Gohir.D12G083200 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.6e-10 70.9 91 41.8
unitig_32.g11811 Utricularia gibba HOM05D005812 ORTHO05D007232 1.6e-10 70.9 157 37.6
CsaV3_4G008880 Cucumis sativus L. HOM05D005812 ORTHO05D007232 2.1e-10 70.5 126 36.5
CARHR113520 Cardamine hirsuta HOM05D005812 ORTHO05D007232 6.1e-10 68.9 162 32.1
EL10Ac6g15110 Beta vulgaris HOM05D005812 ORTHO05D007232 3.3e-08 63.2 164 32.3
Peaxi162Scf00611g00015 Petunia axillaris HOM05D005812 ORTHO05D007232 1.3e-07 61.2 134 33.6
Aa31LG6G15360 Aethionema arabicum HOM05D000249 ORTHO05D000206 4.8e-07 59.3 123 31.7
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 8.2e-07 58.5 90 38.9


User provided reference genes

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