Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 3.8e-155 551.6 305 100.0
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 2.3e-99 366.3 265 72.5
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 4.4e-95 352.1 329 62.6
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.5e-90 337.0 297 62.6
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.1e-89 333.2 302 61.9
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.1e-88 330.9 264 66.3
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.8e-88 330.1 265 66.4
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.8e-88 330.1 264 67.4
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 4.0e-88 328.9 264 67.0
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 5.2e-88 328.6 264 65.2
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.2e-87 327.4 277 61.7
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.5e-87 327.0 264 64.4
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 2.0e-87 326.6 267 64.4
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.0e-87 326.6 263 66.2
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.0e-87 326.6 264 64.0
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 2.6e-87 326.2 263 65.4
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.6e-87 326.2 264 64.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 5.8e-87 325.1 266 64.3
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 7.6e-87 324.7 265 66.4
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 7.6e-87 324.7 264 63.3
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.8e-86 322.4 265 65.7
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.8e-86 322.4 265 65.7
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 4.9e-86 322.0 274 62.4
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 8.4e-86 321.2 264 63.3
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 4.1e-85 318.9 266 63.5
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 7.1e-85 318.2 266 63.5
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 9.2e-85 317.8 268 62.3
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.1e-84 316.6 265 63.0
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.7e-84 316.2 264 64.0
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 3.5e-84 315.8 267 64.4
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 6.0e-84 315.1 264 63.3
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 1.0e-83 314.3 265 62.6
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.7e-83 313.5 266 63.5
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.7e-83 313.5 264 61.0
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 3.0e-83 312.8 264 62.5
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 3.9e-83 312.4 264 61.7
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 8.6e-83 311.2 264 60.2
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 3.3e-82 309.3 268 60.8
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 4.3e-82 308.9 264 59.8
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 9.6e-82 307.8 265 59.6
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.2e-81 307.4 314 55.1
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.6e-81 307.0 264 59.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.6e-81 307.0 265 61.5
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 3.6e-81 305.8 269 59.5
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.7e-81 305.4 263 60.8
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 8.1e-81 304.7 267 59.9
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.1e-80 304.3 268 60.4
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.1e-80 304.3 266 62.4
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.1e-80 304.3 266 62.4
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 3.1e-80 302.8 264 58.7
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 3.1e-80 302.8 264 59.1
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 5.2e-80 302.0 265 59.6
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 5.2e-80 302.0 265 59.6
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 6.9e-80 301.6 265 59.6
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 6.9e-80 301.6 260 60.0
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.5e-79 300.4 264 58.7
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.6e-79 299.7 222 69.4
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 3.4e-79 299.3 268 58.6
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 4.4e-79 298.9 264 58.3
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 4.4e-79 298.9 269 58.7
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 5.8e-79 298.5 264 59.8
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 7.6e-79 298.1 265 57.7
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 9.9e-79 297.7 263 57.4
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.3e-78 297.4 266 59.4
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.7e-78 297.0 267 58.4
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 2.9e-78 296.2 264 58.7
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 8.4e-78 294.7 266 59.8
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.9e-77 293.5 225 68.9
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 2.4e-77 293.1 279 56.6
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 5.4e-77 292.0 223 68.6
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 9.3e-77 291.2 254 60.6
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.2e-76 290.8 262 59.5
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 4.6e-76 288.9 265 60.4
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 4.6e-76 288.9 224 65.6
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 4.6e-76 288.9 224 67.0
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 7.8e-76 288.1 263 57.8
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 3.9e-75 285.8 224 64.3
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 1.1e-74 284.3 234 64.5
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.9e-74 283.5 268 56.3
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 4.3e-74 282.3 225 64.9
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.6e-73 280.4 222 65.8
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.1e-73 280.0 265 58.1
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 3.6e-73 279.3 223 65.0
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 4.5e-71 272.3 217 65.9
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 5.8e-71 271.9 230 62.6
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 7.6e-71 271.6 228 62.7
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.7e-70 270.4 272 54.8
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 4.9e-62 242.3 263 51.7
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 1.1e-61 241.1 228 56.1
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 9.3e-61 238.0 216 56.5
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.1e-60 236.9 265 50.6
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 1.1e-58 231.1 191 62.3
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 9.6e-58 228.0 189 61.9
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.3e-57 227.6 264 47.3
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.4e-56 223.4 265 44.2
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 3.4e-55 219.5 165 65.5
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 1.0e-54 218.0 269 49.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.7e-54 217.2 189 59.8
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.9e-53 213.8 226 54.0
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 2.8e-49 199.9 288 41.3
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 2.7e-44 183.3 265 38.5
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 3.6e-44 183.0 219 50.7
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 1.3e-43 181.0 167 59.3
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 2.3e-43 180.3 253 39.5
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 3.9e-43 179.5 252 40.9
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 9.1e-40 168.3 212 43.4
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.7e-30 137.5 102 68.6
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.4e-29 134.4 272 31.6
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 3.2e-29 133.3 148 51.4
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-23 114.8 247 33.6
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 1.6e-20 104.4 96 55.2
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.4e-19 101.3 63 71.4
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.2e-18 98.2 75 64.0
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 4.4e-18 96.3 90 55.6
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 5.7e-18 95.9 59 74.6
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 9.7e-18 95.1 98 56.1
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 6.3e-17 92.4 91 53.8
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 6.5e-14 82.4 90 48.9


User provided reference genes

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