Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12905 Vaccinium macrocarpon HOM05D006120 ORTHO05D007913 0.0e+00 1265.8 602 100.0
Actinidia05860 Actinidia chinensis HOM05D006120 ORTHO05D007913 6.7e-188 661.4 455 71.2
Dinv19489 Davidia involucrata HOM05D006120 ORTHO05D007913 2.9e-183 646.0 445 70.1
CSS0019172 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 5.5e-182 641.7 457 69.8
QL06p032201 Quercus lobata HOM05D006120 ORTHO05D007913 2.3e-180 636.3 446 68.8
Peaxi162Scf00323g00517 Petunia axillaris HOM05D006120 ORTHO05D007913 5.7e-179 631.7 445 68.5
CAN.G276.3 Capsicum annuum HOM05D006120 ORTHO05D007913 7.5e-179 631.3 445 68.5
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 3.7e-178 629.0 483 66.3
Potri.007G081400 Populus trichocarpa HOM05D006120 ORTHO05D007913 1.8e-177 626.7 448 67.6
Solyc04g053120.3 Solanum lycopersicum HOM05D006120 ORTHO05D007913 1.8e-177 626.7 445 68.1
Lj4C877G13 Lonicera japonica HOM05D006120 ORTHO05D007913 2.4e-177 626.3 443 68.2
Sopen04g023470 Solanum pennellii HOM05D006120 ORTHO05D007913 2.4e-177 626.3 445 68.1
PGSC0003DMG400016589 Solanum tuberosum HOM05D006120 ORTHO05D007913 3.1e-177 625.9 465 66.0
GSVIVG01022223001 Vitis vinifera HOM05D006120 ORTHO05D007913 5.3e-177 625.2 445 67.2
Haze_25037 Corylus avellana HOM05D006120 ORTHO05D007913 2.0e-176 623.2 444 68.2
Sabra07G0068400 Salix brachista HOM05D006120 ORTHO05D007913 2.0e-176 623.2 448 67.6
CiPaw.04G092000 Carya illinoinensis HOM05D006120 ORTHO05D007913 1.0e-175 620.9 444 67.6
Nn1g05190 Nelumbo nucifera HOM05D006120 ORTHO05D007913 1.3e-175 620.5 466 64.8
Prupe.6G173200 Prunus persica HOM05D006120 ORTHO05D007913 1.3e-175 620.5 443 67.9
Ciclev10025236m.g Citrus clementina HOM05D006120 ORTHO05D007913 5.0e-175 618.6 444 67.6
ECA238G0742 Erigeron canadensis HOM05D006120 ORTHO05D007913 5.0e-175 618.6 446 67.9
CANSAT01G3221 Cannabis sativa HOM05D006120 ORTHO05D007913 6.5e-175 618.2 445 67.6
MD15G1333300 Malus domestica HOM05D006120 ORTHO05D007913 1.9e-174 616.7 443 67.5
TAR628G0801 Trochodendron aralioides HOM05D006120 ORTHO05D007913 3.2e-174 615.9 460 66.3
Glyma.04G219500 Glycine max HOM05D006120 ORTHO05D007913 5.5e-174 615.1 444 66.0
SalBow5G0625 Salvia bowleyana HOM05D006120 ORTHO05D007913 5.5e-174 615.1 442 67.2
SalBow5G3003 Salvia bowleyana HOM05D006120 ORTHO05D007913 5.5e-174 615.1 442 67.2
Glyma.06G146400 Glycine max HOM05D006120 ORTHO05D007913 7.2e-174 614.8 444 66.0
AUR62003308 Chenopodium quinoa HOM05D006120 ORTHO05D007913 2.1e-173 613.2 444 67.1
RcHm_v2.0_Chr2g0116371 Rosa chinensis HOM05D006120 ORTHO05D007913 2.1e-173 613.2 444 66.7
CsaV3_2G017550 Cucumis sativus L. HOM05D006120 ORTHO05D007913 2.7e-173 612.8 443 66.1
Lsat_1_v5_gn_2_67361 Lactuca sativa HOM05D006120 ORTHO05D007913 3.6e-173 612.5 460 66.1
Hma1.2p1_0375F.1_g138700 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 8.0e-173 611.3 454 67.0
Sed0002401 Sechium edule HOM05D006120 ORTHO05D007913 8.0e-173 611.3 446 65.7
Nn5g28915 Nelumbo nucifera HOM05D006120 ORTHO05D007913 1.4e-172 610.5 465 64.3
Lj1g0008968 Lotus japonicus HOM05D006120 ORTHO05D007913 8.8e-172 607.8 475 62.1
SGA_v2.0_scaffold34G13619 Striga asiatica HOM05D006120 ORTHO05D007913 8.8e-172 607.8 449 66.8
FvH4_1g22230 Fragaria vesca HOM05D006120 ORTHO05D007913 1.5e-171 607.1 466 63.5
Phvul.009G139500 Phaseolus vulgaris HOM05D006120 ORTHO05D007913 1.5e-171 607.1 466 64.2
Sc03g0004320 Simmondsia chinensis HOM05D006120 ORTHO05D007913 1.5e-171 607.1 444 65.8
Manes.12G142500 Manihot esculenta HOM05D006120 ORTHO05D007913 2.0e-171 606.7 443 66.8
Atru.chr4.351 Acer truncatum HOM05D006120 ORTHO05D007913 5.7e-171 605.1 436 67.7
HanXRQChr15g0484401 Helianthus annuus HOM05D006120 ORTHO05D007913 9.8e-171 604.4 444 65.5
MSTRG.15748 Avicennia marina HOM05D006120 ORTHO05D007913 2.2e-170 603.2 444 65.8
TWI53G1580 Tripterygium wilfordii HOM05D006120 ORTHO05D007913 2.8e-170 602.8 444 65.1
arahy.Tifrunner.gnm1.ann1.AFE07A Arachis hypogaea HOM05D006120 ORTHO05D007913 3.7e-170 602.4 444 65.1
MELO3C020949.2 Cucumis melo HOM05D006120 ORTHO05D007913 3.7e-170 602.4 458 64.0
arahy.Tifrunner.gnm1.ann1.UD5YJS Arachis hypogaea HOM05D006120 ORTHO05D007913 4.8e-170 602.1 444 64.9
Thecc.01G112500 Theobroma cacao HOM05D006120 ORTHO05D007913 5.4e-169 598.6 443 66.1
Aqoxy6G00482 Aquilegia oxysepala HOM05D006120 ORTHO05D007913 7.0e-169 598.2 455 63.3
FAN19G1919 Fragaria x ananassa HOM05D006120 ORTHO05D007913 2.0e-168 596.7 476 62.0
arahy.Tifrunner.gnm1.ann1.Y3LRN9 Arachis hypogaea HOM05D006120 ORTHO05D007913 2.7e-168 596.3 444 64.4
Ca_16892_v3 Cicer arietinum L. HOM05D006120 ORTHO05D007913 3.5e-168 595.9 461 62.5
Duzib147G0722 Durio zibethinus HOM05D006120 ORTHO05D007913 4.5e-168 595.5 443 65.7
TPR.G23750 Trifolium pratense HOM05D006120 ORTHO05D007913 4.5e-168 595.5 443 64.3
PSO675G5066 Papaver somniferum HOM05D006120 ORTHO05D007913 7.7e-168 594.7 447 64.0
MBI05_g43693_MAGBIO Magnolia biondii HOM05D006120 ORTHO05D007913 1.3e-167 594.0 443 64.3
FAN23G0349 Fragaria x ananassa HOM05D006120 ORTHO05D007913 1.7e-167 593.6 476 61.8
Eucgr.I00325 Eucalyptus grandis HOM05D006120 ORTHO05D007913 2.2e-167 593.2 444 64.9
EL10Ac6g14753 Beta vulgaris HOM05D006120 ORTHO05D007913 3.8e-167 592.4 447 64.9
Gohir.D03G045900 Gossypium hirsutum HOM05D006120 ORTHO05D007913 3.8e-167 592.4 443 65.0
Gohir.A02G135000 Gossypium hirsutum HOM05D006120 ORTHO05D007913 4.2e-166 589.0 443 64.3
Psat5g065400 Pisum sativum HOM05D006120 ORTHO05D007913 7.2e-166 588.2 444 63.5
Gorai.003G047100 Gossypium raimondii HOM05D006120 ORTHO05D007913 4.7e-165 585.5 443 64.3
Lalb_Chr08g0238881 Lupinus albus HOM05D006120 ORTHO05D007913 4.0e-164 582.4 443 63.9
DCAR_010077 Daucus carota HOM05D006120 ORTHO05D007913 1.2e-163 580.9 445 64.3
PGR004G1464 Punica granatum HOM05D006120 ORTHO05D007913 5.7e-163 578.6 449 63.3
CDE09G0932 Ceratophyllum demersum HOM05D006120 ORTHO05D007913 9.8e-163 577.8 444 62.2
CDE11G1197 Ceratophyllum demersum HOM05D006120 ORTHO05D007913 1.7e-162 577.0 444 62.6
Medtr3g094840 Medicago truncatula HOM05D006120 ORTHO05D007913 2.8e-162 576.2 444 62.8
THA.LOC104818477 Tarenaya hassleriana HOM05D006120 ORTHO05D007913 2.8e-162 576.2 444 63.7
ATR0564G344 Amborella trichopoda HOM05D006120 ORTHO05D007913 1.8e-161 573.5 443 62.5
AT5G64860 Arabidopsis thaliana HOM05D006120 ORTHO05D007913 7.0e-161 571.6 446 62.6
BcaB04g19998 Brassica carinata HOM05D006120 ORTHO05D007913 1.2e-160 570.9 446 62.8
Carub.0008s2569 Capsella rubella HOM05D006120 ORTHO05D007913 1.6e-160 570.5 446 62.6
BcaC04g23275 Brassica carinata HOM05D006120 ORTHO05D007913 7.7e-160 568.2 446 63.2
BraA09t36539Z Brassica rapa HOM05D006120 ORTHO05D007913 1.0e-159 567.8 447 62.4
A09p08880 Brassica napus HOM05D006120 ORTHO05D007913 1.7e-159 567.0 447 62.9
C09p10300 Brassica napus HOM05D006120 ORTHO05D007913 3.8e-159 565.8 447 63.3
ClCG02G013390 Citrullus lanatus HOM05D006120 ORTHO05D007913 6.6e-159 565.1 443 62.5
Thhalv10003902m.g Eutrema salsugineum HOM05D006120 ORTHO05D007913 8.6e-159 564.7 444 62.6
BolC9t53930H Brassica oleracea HOM05D006120 ORTHO05D007913 1.9e-158 563.5 447 63.1
Sp2g27940 Schrenkiella parvula HOM05D006120 ORTHO05D007913 1.9e-158 563.5 469 60.1
Hund19657 Selenicereus undatus HOM05D006120 ORTHO05D007913 4.3e-158 562.4 447 60.4
unitig_88.g27738 Utricularia gibba HOM05D006120 ORTHO05D007913 1.5e-155 553.9 442 61.1
FAN28G2353 Fragaria x ananassa HOM05D006120 ORTHO05D007913 2.6e-155 553.1 443 62.1
COL.COLO4_11015 Corchorus olitorius HOM05D006120 ORTHO05D007913 4.4e-155 552.4 443 62.1
Aa31LG1G17070 Aethionema arabicum HOM05D006120 ORTHO05D007913 3.2e-153 546.2 443 61.6
Os07g0627000 Oryza sativa ssp. japonica HOM05D006120 ORTHO05D007913 1.2e-152 544.3 443 59.1
Rhsim10G0151000 Rhododendron simsii HOM05D006120 ORTHO05D007913 2.0e-152 543.5 829 40.7
Migut.L00074 Erythranthe guttata HOM05D006120 ORTHO05D007913 3.5e-152 542.7 442 62.0
Zm00001eb328070 Zea mays HOM05D006120 ORTHO05D007913 7.8e-152 541.6 443 58.2
HPP92_016849 Vanilla planifolia HOM05D006120 ORTHO05D007913 6.6e-151 538.5 443 58.9
Nitab4.5_0000471g0040 Nicotiana tabacum HOM05D006120 ORTHO05D007913 8.0e-149 531.6 386 68.4
CARHR278870 Cardamine hirsuta HOM05D006120 ORTHO05D007913 1.6e-144 517.3 444 58.6
AUR62016277 Chenopodium quinoa HOM05D006120 ORTHO05D007913 2.3e-132 476.9 443 56.0
Cpa.g.sc196.11 Carica papaya HOM05D006120 ORTHO05D007913 1.3e-130 471.1 382 62.6
AagrBONN_evm.TU.Sc2ySwM_362.2612 Anthoceros agrestis HOM05D006120 ORTHO05D007913 1.3e-127 461.1 447 52.1
SMO164G0070 Selaginella moellendorffii HOM05D006120 ORTHO05D007913 1.3e-127 461.1 447 51.5
Mapoly0007s0077 Marchantia polymorpha HOM05D006120 ORTHO05D007913 2.6e-123 446.8 448 49.3
Pp3c20_17800 Physcomitrium patens HOM05D006120 ORTHO05D007913 9.9e-123 444.9 447 50.6
Ah.02g125980 Amaranthus hybridus HOM05D006120 ORTHO05D007913 7.1e-121 438.7 258 78.7
Pp3c8_6000 Physcomitrium patens HOM05D006120 ORTHO05D007913 4.0e-116 422.9 444 47.7
Pp3c6_28760 Physcomitrium patens HOM05D006120 ORTHO05D007913 5.3e-116 422.5 445 48.5
CBR_g31505 Chara braunii HOM05D006120 ORTHO05D007913 9.9e-115 418.3 462 46.8
CBR_g16839 Chara braunii HOM05D006120 ORTHO05D007913 2.0e-107 394.0 433 47.1
MCO01G332 Micromonas commoda HOM05D006120 ORTHO05D007913 9.3e-97 358.6 452 43.1
Cre03.g181500 Chlamydomonas reinhardtii HOM05D006120 ORTHO05D007913 1.0e-95 355.1 447 43.0
Hma1.2p1_0375F.1_g138730 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 1.1e-94 351.7 283 62.5
PRCOL_00006523 Prasinoderma coloniale HOM05D006120 ORTHO05D007913 1.4e-71 275.0 408 39.0
SMO164G0033 Selaginella moellendorffii HOM05D006120 ORTHO05D007913 2.2e-69 267.7 410 38.5
Hma1.2p1_0375F.1_g138710 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 5.5e-57 226.5 144 74.3
SEGI_21408 Sequoiadendron giganteum HOM05D006120 ORTHO05D007913 1.2e-51 208.8 158 61.4
MD01G1019100 Malus domestica HOM05D006120 ORTHO05D007913 1.2e-43 182.2 113 71.7
Cc03_g11750 Coffea canephora HOM05D006120 ORTHO05D007913 5.0e-34 150.2 75 90.7
SEGI_26254 Sequoiadendron giganteum HOM05D006120 ORTHO05D007913 2.6e-30 137.9 104 57.7
SEGI_24493 Sequoiadendron giganteum HOM05D006120 ORTHO05D007913 9.5e-25 119.4 92 60.9
HanXRQChr15g0494861 Helianthus annuus HOM05D006120 ORTHO05D007913 9.9e-22 109.4 164 39.6
CBR_g6687 Chara braunii HOM05D005318 ORTHO05D006791 2.3e-18 98.2 409 24.4
ATR0782G050 Amborella trichopoda HOM05D005318 ORTHO05D006791 7.6e-14 83.2 246 28.0
RcHm_v2.0_Chr3g0494731 Rosa chinensis HOM05D005318 ORTHO05D006791 2.4e-12 78.2 275 25.8
PGR142G3097 Punica granatum HOM05D005318 ORTHO05D006791 9.2e-12 76.3 246 26.4
MBI19_g45589_MAGBIO Magnolia biondii HOM05D005318 ORTHO05D006791 1.2e-11 75.9 248 27.0
Aqoxy1G00050 Aquilegia oxysepala HOM05D005318 ORTHO05D006791 4.6e-11 73.9 248 25.8
FAN23G1756 Fragaria x ananassa HOM05D005318 ORTHO05D006791 4.6e-11 73.9 242 24.8
CDE08G1108 Ceratophyllum demersum HOM05D005318 ORTHO05D006791 6.0e-11 73.6 255 27.8
HPP92_014255 Vanilla planifolia HOM05D005318 ORTHO05D006791 6.0e-11 73.6 248 27.0
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea HOM05D005318 ORTHO05D006791 1.3e-10 72.4 322 25.2
Cre02.g095126 Chlamydomonas reinhardtii HOM05D005318 ORTHO05D006791 1.3e-10 72.4 276 25.7
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea HOM05D005318 ORTHO05D006791 1.7e-10 72.0 246 25.6
Pp3c15_25660 Physcomitrium patens HOM05D005318 ORTHO05D006791 3.9e-10 70.9 218 29.8
FvH4_1g29260 Fragaria vesca HOM05D005318 ORTHO05D006791 8.7e-10 69.7 242 24.0
MD01G1019200 Malus domestica HOM05D006120 ORTHO05D007913 1.5e-09 68.9 41 70.7
Mapoly0011s0190 Marchantia polymorpha HOM05D005318 ORTHO05D006791 1.5e-09 68.9 241 26.6
TAR633G2118 Trochodendron aralioides HOM05D005318 ORTHO05D006791 1.5e-09 68.9 253 26.1
Os07g0662900 Oryza sativa ssp. japonica HOM05D005318 ORTHO05D006791 1.9e-09 68.6 247 24.7
Atru.chr1.3653 Acer truncatum HOM05D006120 ORTHO05D007913 4.3e-09 67.4 66 53.0
FAN26G2899 Fragaria x ananassa HOM05D005318 ORTHO05D006791 1.2e-06 59.3 89 33.7
FAN19G2285 Fragaria x ananassa HOM05D005318 ORTHO05D006791 1.5e-06 58.9 89 33.7


User provided reference genes

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