Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12904 Vaccinium macrocarpon HOM05D006120 ORTHO05D007913 6.0e-115 417.5 214 100.0
Rhsim10G0151000 Rhododendron simsii HOM05D006120 ORTHO05D007913 1.7e-61 240.0 167 76.0
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 6.1e-59 231.5 168 73.8
CSS0019172 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 1.8e-58 229.9 168 73.2
Thecc.01G112500 Theobroma cacao HOM05D006120 ORTHO05D007913 2.6e-57 226.1 184 66.3
Actinidia05860 Actinidia chinensis HOM05D006120 ORTHO05D007913 7.5e-57 224.6 167 70.7
Atru.chr4.351 Acer truncatum HOM05D006120 ORTHO05D007913 9.8e-57 224.2 167 71.9
COL.COLO4_11015 Corchorus olitorius HOM05D006120 ORTHO05D007913 9.8e-57 224.2 169 69.2
Haze_25037 Corylus avellana HOM05D006120 ORTHO05D007913 9.8e-57 224.2 168 71.4
DCAR_010077 Daucus carota HOM05D006120 ORTHO05D007913 9.8e-57 224.2 168 70.8
Lj4C877G13 Lonicera japonica HOM05D006120 ORTHO05D007913 9.8e-57 224.2 168 70.2
MD15G1333300 Malus domestica HOM05D006120 ORTHO05D007913 2.2e-56 223.0 168 70.2
Ciclev10025236m.g Citrus clementina HOM05D006120 ORTHO05D007913 3.7e-56 222.2 168 70.8
ECA238G0742 Erigeron canadensis HOM05D006120 ORTHO05D007913 4.8e-56 221.9 168 69.0
CiPaw.04G092000 Carya illinoinensis HOM05D006120 ORTHO05D007913 8.3e-56 221.1 168 69.6
ClCG02G013390 Citrullus lanatus HOM05D006120 ORTHO05D007913 1.1e-55 220.7 168 70.2
Prupe.6G173200 Prunus persica HOM05D006120 ORTHO05D007913 1.1e-55 220.7 168 69.6
AUR62003308 Chenopodium quinoa HOM05D006120 ORTHO05D007913 1.8e-55 219.9 168 69.0
TWI53G1580 Tripterygium wilfordii HOM05D006120 ORTHO05D007913 1.8e-55 219.9 184 64.1
HanXRQChr15g0484401 Helianthus annuus HOM05D006120 ORTHO05D007913 2.4e-55 219.5 168 69.0
MSTRG.15748 Avicennia marina HOM05D006120 ORTHO05D007913 9.1e-55 217.6 174 67.8
FvH4_1g22230 Fragaria vesca HOM05D006120 ORTHO05D007913 1.2e-54 217.2 168 68.5
Nitab4.5_0000471g0040 Nicotiana tabacum HOM05D006120 ORTHO05D007913 1.2e-54 217.2 168 68.5
AUR62016277 Chenopodium quinoa HOM05D006120 ORTHO05D007913 1.6e-54 216.9 168 68.5
Migut.L00074 Erythranthe guttata HOM05D006120 ORTHO05D007913 1.6e-54 216.9 167 67.1
Hma1.2p1_0375F.1_g138700 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 2.0e-54 216.5 168 68.5
QL06p032201 Quercus lobata HOM05D006120 ORTHO05D007913 2.0e-54 216.5 167 68.9
RcHm_v2.0_Chr2g0116371 Rosa chinensis HOM05D006120 ORTHO05D007913 2.0e-54 216.5 168 67.9
Peaxi162Scf00323g00517 Petunia axillaris HOM05D006120 ORTHO05D007913 3.5e-54 215.7 168 67.9
Solyc04g053120.3 Solanum lycopersicum HOM05D006120 ORTHO05D007913 3.5e-54 215.7 168 67.9
Sopen04g023470 Solanum pennellii HOM05D006120 ORTHO05D007913 3.5e-54 215.7 168 67.9
Duzib147G0722 Durio zibethinus HOM05D006120 ORTHO05D007913 4.5e-54 215.3 168 69.0
FAN19G1919 Fragaria x ananassa HOM05D006120 ORTHO05D007913 5.9e-54 214.9 167 67.7
FAN23G0349 Fragaria x ananassa HOM05D006120 ORTHO05D007913 5.9e-54 214.9 168 67.9
FAN28G2353 Fragaria x ananassa HOM05D006120 ORTHO05D007913 5.9e-54 214.9 167 67.7
Ca_16892_v3 Cicer arietinum L. HOM05D006120 ORTHO05D007913 7.7e-54 214.5 168 67.3
MELO3C020949.2 Cucumis melo HOM05D006120 ORTHO05D007913 7.7e-54 214.5 168 67.9
Lsat_1_v5_gn_2_67361 Lactuca sativa HOM05D006120 ORTHO05D007913 7.7e-54 214.5 164 68.9
Sed0002401 Sechium edule HOM05D006120 ORTHO05D007913 7.7e-54 214.5 168 67.9
Gohir.D03G045900 Gossypium hirsutum HOM05D006120 ORTHO05D007913 1.7e-53 213.4 166 68.1
Gorai.003G047100 Gossypium raimondii HOM05D006120 ORTHO05D007913 1.7e-53 213.4 166 68.1
Lalb_Chr08g0238881 Lupinus albus HOM05D006120 ORTHO05D007913 1.7e-53 213.4 168 67.3
CANSAT01G3221 Cannabis sativa HOM05D006120 ORTHO05D007913 2.2e-53 213.0 168 66.7
PGSC0003DMG400016589 Solanum tuberosum HOM05D006120 ORTHO05D007913 2.2e-53 213.0 168 66.7
GSVIVG01022223001 Vitis vinifera HOM05D006120 ORTHO05D007913 2.2e-53 213.0 168 65.5
CsaV3_2G017550 Cucumis sativus L. HOM05D006120 ORTHO05D007913 2.9e-53 212.6 168 66.7
Potri.007G081400 Populus trichocarpa HOM05D006120 ORTHO05D007913 3.8e-53 212.2 168 67.3
PGR004G1464 Punica granatum HOM05D006120 ORTHO05D007913 3.8e-53 212.2 168 66.7
arahy.Tifrunner.gnm1.ann1.UD5YJS Arachis hypogaea HOM05D006120 ORTHO05D007913 5.0e-53 211.8 166 66.3
Aqoxy6G00482 Aquilegia oxysepala HOM05D006120 ORTHO05D007913 6.5e-53 211.5 168 64.9
Lj1g0008968 Lotus japonicus HOM05D006120 ORTHO05D007913 6.5e-53 211.5 168 65.5
arahy.Tifrunner.gnm1.ann1.AFE07A Arachis hypogaea HOM05D006120 ORTHO05D007913 8.5e-53 211.1 166 66.3
arahy.Tifrunner.gnm1.ann1.Y3LRN9 Arachis hypogaea HOM05D006120 ORTHO05D007913 8.5e-53 211.1 166 66.3
CAN.G276.3 Capsicum annuum HOM05D006120 ORTHO05D007913 1.5e-52 210.3 168 65.5
TAR628G0801 Trochodendron aralioides HOM05D006120 ORTHO05D007913 1.5e-52 210.3 168 66.7
Medtr3g094840 Medicago truncatula HOM05D006120 ORTHO05D007913 1.9e-52 209.9 168 65.5
Manes.12G142500 Manihot esculenta HOM05D006120 ORTHO05D007913 2.5e-52 209.5 168 64.3
TPR.G23750 Trifolium pratense HOM05D006120 ORTHO05D007913 2.5e-52 209.5 168 65.5
Cc03_g11750 Coffea canephora HOM05D006120 ORTHO05D007913 3.2e-52 209.1 168 66.7
Sabra07G0068400 Salix brachista HOM05D006120 ORTHO05D007913 3.2e-52 209.1 187 62.0
Nn1g05190 Nelumbo nucifera HOM05D006120 ORTHO05D007913 5.5e-52 208.4 168 65.5
Glyma.06G146400 Glycine max HOM05D006120 ORTHO05D007913 9.4e-52 207.6 168 64.9
Phvul.009G139500 Phaseolus vulgaris HOM05D006120 ORTHO05D007913 2.1e-51 206.5 168 64.9
SalBow5G3003 Salvia bowleyana HOM05D006120 ORTHO05D007913 2.7e-51 206.1 168 64.9
BcaC04g23275 Brassica carinata HOM05D006120 ORTHO05D007913 3.6e-51 205.7 167 62.9
BolC9t53930H Brassica oleracea HOM05D006120 ORTHO05D007913 3.6e-51 205.7 167 62.9
AT5G64860 Arabidopsis thaliana HOM05D006120 ORTHO05D007913 6.1e-51 204.9 168 63.1
Cc00_g25280 Coffea canephora HOM05D006120 ORTHO05D007913 6.1e-51 204.9 163 67.5
Glyma.04G219500 Glycine max HOM05D006120 ORTHO05D007913 6.1e-51 204.9 168 64.3
Sp2g27940 Schrenkiella parvula HOM05D006120 ORTHO05D007913 6.1e-51 204.9 168 63.7
Hund19657 Selenicereus undatus HOM05D006120 ORTHO05D007913 6.1e-51 204.9 168 63.7
Thhalv10003902m.g Eutrema salsugineum HOM05D006120 ORTHO05D007913 3.0e-50 202.6 168 63.1
THA.LOC104818477 Tarenaya hassleriana HOM05D006120 ORTHO05D007913 3.0e-50 202.6 168 63.7
ATR0564G344 Amborella trichopoda HOM05D006120 ORTHO05D007913 5.2e-50 201.8 167 63.5
A09p08880 Brassica napus HOM05D006120 ORTHO05D007913 8.8e-50 201.1 168 61.9
C09p10300 Brassica napus HOM05D006120 ORTHO05D007913 8.8e-50 201.1 168 62.5
Carub.0008s2569 Capsella rubella HOM05D006120 ORTHO05D007913 8.8e-50 201.1 168 62.5
unitig_88.g27738 Utricularia gibba HOM05D006120 ORTHO05D007913 1.2e-49 200.7 168 63.1
BcaB04g19998 Brassica carinata HOM05D006120 ORTHO05D007913 1.5e-49 200.3 168 63.1
BraA09t36539Z Brassica rapa HOM05D006120 ORTHO05D007913 1.5e-49 200.3 168 61.9
Eucgr.I00325 Eucalyptus grandis HOM05D006120 ORTHO05D007913 1.5e-49 200.3 168 64.3
CARHR278870 Cardamine hirsuta HOM05D006120 ORTHO05D007913 3.4e-49 199.1 168 61.9
Aa31LG1G17070 Aethionema arabicum HOM05D006120 ORTHO05D007913 5.7e-49 198.4 171 60.8
SalBow5G0625 Salvia bowleyana HOM05D006120 ORTHO05D007913 9.8e-49 197.6 161 65.2
MBI05_g43693_MAGBIO Magnolia biondii HOM05D006120 ORTHO05D007913 1.3e-48 197.2 178 60.1
CDE11G1197 Ceratophyllum demersum HOM05D006120 ORTHO05D007913 1.8e-47 193.4 168 60.7
CDE09G0932 Ceratophyllum demersum HOM05D006120 ORTHO05D007913 4.1e-47 192.2 168 60.1
Os07g0627000 Oryza sativa ssp. japonica HOM05D006120 ORTHO05D007913 2.7e-46 189.5 168 60.1
Zm00001eb328070 Zea mays HOM05D006120 ORTHO05D007913 2.9e-45 186.0 166 59.6
Psat5g065400 Pisum sativum HOM05D006120 ORTHO05D007913 8.6e-45 184.5 163 61.3
HPP92_016849 Vanilla planifolia HOM05D006120 ORTHO05D007913 8.6e-45 184.5 159 64.2
SGA_v2.0_scaffold34G13619 Striga asiatica HOM05D006120 ORTHO05D007913 6.1e-43 178.3 130 68.5
AagrBONN_evm.TU.Sc2ySwM_362.2612 Anthoceros agrestis HOM05D006120 ORTHO05D007913 6.8e-42 174.9 192 50.0
EL10Ac6g14753 Beta vulgaris HOM05D006120 ORTHO05D007913 2.0e-41 173.3 168 57.7
Nn5g28915 Nelumbo nucifera HOM05D006120 ORTHO05D007913 2.0e-41 173.3 132 71.2
Pp3c20_17800 Physcomitrium patens HOM05D006120 ORTHO05D007913 1.3e-40 170.6 166 54.8
Mapoly0007s0077 Marchantia polymorpha HOM05D006120 ORTHO05D007913 1.8e-39 166.8 167 53.9
Hma1.2p1_0375F.1_g138730 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 7.8e-38 161.4 133 66.9
CBR_g16839 Chara braunii HOM05D006120 ORTHO05D007913 3.0e-37 159.5 172 50.6
Pp3c8_6000 Physcomitrium patens HOM05D006120 ORTHO05D007913 3.0e-37 159.5 181 47.5
CBR_g31505 Chara braunii HOM05D006120 ORTHO05D007913 6.6e-37 158.3 169 50.9
SMO164G0070 Selaginella moellendorffii HOM05D006120 ORTHO05D007913 1.1e-36 157.5 167 49.7
Pp3c6_28760 Physcomitrium patens HOM05D006120 ORTHO05D007913 2.8e-35 152.9 166 46.4
SEGI_23685 Sequoiadendron giganteum HOM05D006120 ORTHO05D007913 1.8e-34 150.2 128 64.8
Cre03.g181500 Chlamydomonas reinhardtii HOM05D006120 ORTHO05D007913 1.5e-28 130.6 182 42.3
Ah.02g125980 Amaranthus hybridus HOM05D006120 ORTHO05D007913 1.2e-27 127.5 105 63.8
MCO01G332 Micromonas commoda HOM05D006120 ORTHO05D007913 1.1e-26 124.4 167 40.7
PRCOL_00006523 Prasinoderma coloniale HOM05D006120 ORTHO05D007913 1.3e-21 107.5 169 37.9
Gohir.A02G135000 Gossypium hirsutum HOM05D006120 ORTHO05D007913 3.9e-21 105.9 67 77.6
PSO675G5066 Papaver somniferum HOM05D006120 ORTHO05D007913 1.6e-19 100.5 98 58.2
BolC2t12429H Brassica oleracea HOM05D006120 ORTHO05D042482 2.1e-14 83.6 87 49.4
C02p63630 Brassica napus HOM05D006120 ORTHO05D042482 4.7e-11 72.4 53 62.3
Sc03g0004320 Simmondsia chinensis HOM05D006120 ORTHO05D007913 7.8e-06 55.1 35 77.1


User provided reference genes

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