Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12891 Vaccinium macrocarpon HOM05D006367 ORTHO05D007942 9.7e-95 350.1 176 100.0
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 2.7e-44 182.6 132 73.5
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 5.4e-29 131.7 122 58.2
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 3.3e-26 122.5 148 51.4
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 3.3e-26 122.5 95 62.1
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 1.2e-25 120.6 154 47.4
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 3.6e-25 119.0 148 50.0
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 4.7e-25 118.6 134 53.0
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 6.2e-25 118.2 104 56.7
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 6.2e-25 118.2 152 48.0
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 8.1e-25 117.9 104 56.7
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 1.1e-24 117.5 122 49.2
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 1.4e-24 117.1 120 57.5
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 1.4e-24 117.1 109 56.0
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 1.4e-24 117.1 99 60.6
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 6.9e-24 114.8 149 45.0
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 3.4e-23 112.5 150 42.7
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 1.3e-22 110.5 147 45.6
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 1.7e-22 110.2 161 46.0
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 1.7e-22 110.2 172 40.1
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 2.2e-22 109.8 102 53.9
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 3.8e-22 109.0 91 61.5
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 8.4e-22 107.8 151 42.4
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 1.4e-21 107.1 111 52.3
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 1.4e-21 107.1 121 51.2
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.9e-21 106.7 109 53.2
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 2.4e-21 106.3 109 50.5
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 2.4e-21 106.3 127 49.6
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 3.2e-21 105.9 99 54.5
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 4.2e-21 105.5 153 43.1
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 5.4e-21 105.1 138 46.4
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 7.1e-21 104.8 121 45.5
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 7.1e-21 104.8 151 43.7
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 9.3e-21 104.4 167 39.5
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 1.2e-20 104.0 155 43.9
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 1.2e-20 104.0 110 54.5
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 1.2e-20 104.0 98 53.1
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 1.6e-20 103.6 107 53.3
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 1.6e-20 103.6 108 50.0
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 2.1e-20 103.2 112 51.8
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 2.1e-20 103.2 105 50.5
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 2.7e-20 102.8 94 58.5
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 3.5e-20 102.4 140 46.4
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 3.5e-20 102.4 91 56.0
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 4.6e-20 102.1 155 43.2
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 4.6e-20 102.1 118 47.5
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 4.6e-20 102.1 148 45.9
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 4.6e-20 102.1 94 58.5
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 6.0e-20 101.7 90 57.8
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 1.0e-19 100.9 154 44.2
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 1.3e-19 100.5 118 48.3
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.3e-19 100.5 75 65.3
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 1.3e-19 100.5 105 54.3
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 1.7e-19 100.1 76 68.4
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.7e-19 100.1 94 57.4
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 1.7e-19 100.1 119 47.9
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 2.3e-19 99.8 103 49.5
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 3.0e-19 99.4 120 44.2
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 3.0e-19 99.4 120 44.2
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 3.9e-19 99.0 90 53.3
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 5.1e-19 98.6 109 45.0
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 1.1e-18 97.4 80 58.8
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 1.1e-18 97.4 90 53.3
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 1.5e-18 97.1 104 48.1
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 1.5e-18 97.1 104 48.1
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 1.5e-18 97.1 98 51.0
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 1.9e-18 96.7 92 53.3
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 1.9e-18 96.7 90 53.3
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 1.9e-18 96.7 77 62.3
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 2.5e-18 96.3 108 47.2
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 2.5e-18 96.3 78 61.5
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 3.3e-18 95.9 95 49.5
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 3.3e-18 95.9 81 56.8
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 3.3e-18 95.9 90 51.1
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 3.3e-18 95.9 163 41.7
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 4.3e-18 95.5 73 57.5
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 5.6e-18 95.1 75 57.3
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 7.3e-18 94.7 77 55.8
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 7.3e-18 94.7 83 56.6
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 2.1e-17 93.2 91 53.8
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 2.8e-17 92.8 103 45.6
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 4.8e-17 92.0 117 47.9
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 1.1e-16 90.9 129 41.9
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 1.4e-16 90.5 146 40.4
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 1.4e-16 90.5 92 51.1
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 3.1e-16 89.4 101 47.5
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 6.9e-16 88.2 78 60.3
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.3e-14 84.0 99 47.5
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 1.7e-14 83.6 110 42.7
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 2.9e-14 82.8 78 53.8
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 1.4e-13 80.5 83 47.0
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 4.2e-13 79.0 83 50.6
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 7.1e-13 78.2 101 40.6
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 6.7e-11 71.6 53 64.2
RcHm_v2.0_Chr2g0117431 Rosa chinensis HOM05D006367 ORTHO05D007942 7.4e-10 68.2 108 42.6
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 7.4e-10 68.2 72 45.8
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 6.2e-09 65.1 52 59.6
CARHR034070 Cardamine hirsuta HOM05D006367 ORTHO05D007942 5.8e-07 58.5 93 35.5
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 5.8e-07 58.5 60 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 8.4e-06 54.7 45 53.3


User provided reference genes

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