Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 6.8e-128 460.7 236 100.0
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 4.5e-103 378.3 236 83.9
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 1.4e-93 346.7 236 75.4
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 4.6e-84 315.1 236 70.3
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 1.9e-77 293.1 236 64.4
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 2.1e-76 289.7 236 63.6
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 1.8e-75 286.6 235 64.3
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 5.1e-75 285.0 236 63.1
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 1.1e-74 283.9 236 63.6
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 1.3e-73 280.4 237 63.3
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 1.8e-72 276.6 237 62.0
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 7.7e-71 271.2 235 60.0
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 5.0e-70 268.5 238 58.4
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 5.0e-70 268.5 225 62.2
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 1.1e-69 267.3 236 58.5
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 7.2e-69 264.6 236 59.3
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 7.2e-69 264.6 236 59.3
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 9.4e-69 264.2 236 58.1
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 3.6e-68 262.3 236 57.6
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 5.1e-67 258.5 236 58.1
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 2.6e-66 256.1 236 57.2
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 4.4e-66 255.4 238 58.4
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 4.4e-66 255.4 236 57.6
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 9.7e-66 254.2 236 57.2
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 9.7e-66 254.2 236 57.2
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 9.7e-66 254.2 261 55.2
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.3e-65 253.8 236 56.8
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 2.8e-65 252.7 236 58.1
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 3.7e-65 252.3 236 59.3
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 1.4e-64 250.4 236 58.1
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 1.2e-63 247.3 238 54.6
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 1.2e-63 247.3 255 52.9
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 2.0e-63 246.5 241 57.3
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 2.0e-63 246.5 239 56.9
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 2.0e-63 246.5 255 52.9
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 8.5e-62 241.1 236 55.9
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 1.1e-61 240.7 236 55.5
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 1.5e-61 240.4 232 53.9
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 1.5e-61 240.4 236 55.9
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.9e-61 240.0 236 55.5
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 4.2e-61 238.8 236 55.5
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 2.7e-60 236.1 231 56.3
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 4.7e-60 235.3 235 52.8
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 1.8e-59 233.4 242 55.8
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 2.3e-59 233.0 236 55.1
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 2.8e-57 226.1 222 55.0
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 4.8e-57 225.3 236 51.3
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 8.2e-57 224.6 231 52.8
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 1.4e-56 223.8 224 54.5
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 1.8e-56 223.4 237 51.5
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.8e-56 223.4 224 52.2
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 7.7e-55 218.0 232 52.2
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 1.3e-54 217.2 237 51.5
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 5.0e-54 215.3 220 53.6
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 5.0e-54 215.3 226 51.8
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 8.5e-54 214.5 230 53.0
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 8.5e-54 214.5 230 53.0
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 8.5e-54 214.5 188 58.5
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 1.1e-53 214.2 216 55.1
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 1.9e-53 213.4 232 50.4
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 1.9e-53 213.4 236 48.7
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 1.9e-53 213.4 216 55.6
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 4.2e-53 212.2 232 50.9
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 4.2e-53 212.2 239 49.8
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 4.2e-53 212.2 187 58.3
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 5.5e-53 211.8 224 53.6
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 5.5e-53 211.8 227 52.4
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 5.5e-53 211.8 226 52.2
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 7.2e-53 211.5 221 53.4
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 1.2e-52 210.7 238 51.7
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 1.2e-52 210.7 232 50.4
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 2.1e-52 209.9 238 51.7
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 2.1e-52 209.9 232 48.3
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 3.6e-52 209.1 232 50.4
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 3.6e-52 209.1 232 50.4
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 3.6e-52 209.1 232 50.4
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 3.6e-52 209.1 214 53.7
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 4.7e-52 208.8 238 51.3
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 4.7e-52 208.8 238 51.3
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 4.7e-52 208.8 238 51.3
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 4.7e-52 208.8 232 53.0
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 8.0e-52 208.0 225 51.1
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 1.4e-51 207.2 236 51.7
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 1.8e-51 206.8 225 51.1
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.8e-51 206.8 230 50.9
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 2.3e-51 206.5 238 50.4
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 3.0e-51 206.1 238 50.8
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 4.0e-51 205.7 238 50.4
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 5.2e-51 205.3 224 47.3
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 8.8e-51 204.5 236 48.3
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 1.2e-50 204.1 238 50.4
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 1.2e-50 204.1 253 47.8
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 1.5e-50 203.8 226 52.7
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.5e-50 203.8 238 49.6
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.5e-50 203.8 238 49.6
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 2.0e-50 203.4 205 53.7
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 4.4e-50 202.2 163 61.3
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 9.8e-50 201.1 187 57.8
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 1.3e-49 200.7 223 50.7
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 3.7e-49 199.1 218 52.3
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 1.8e-48 196.8 229 49.8
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 4.1e-48 195.7 212 49.1
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 7.7e-47 191.4 249 46.2
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 1.7e-46 190.3 239 49.4
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 8.5e-46 188.0 236 46.6
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 1.6e-44 183.7 177 55.4
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.4e-43 180.6 238 45.8
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 2.3e-43 179.9 222 45.9
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 3.0e-43 179.5 199 47.2
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 3.4e-42 176.0 239 45.6
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 1.3e-41 174.1 172 55.8
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 6.6e-38 161.8 219 41.1
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 6.1e-36 155.2 212 41.0
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 1.5e-29 134.0 191 42.4
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 3.6e-28 129.4 176 41.5
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 2.3e-27 126.7 212 40.1
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 2.9e-25 119.8 89 66.3
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 4.9e-25 119.0 152 46.1
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.0e-22 111.3 85 61.2
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.3e-22 110.9 90 57.8
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 2.3e-22 110.2 170 37.1
Cpa.g.sc18.189 Carica papaya HOM05D004825 ORTHO05D005415 2.5e-21 106.7 118 54.2
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.2e-20 104.4 85 57.6
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 1.6e-20 104.0 117 52.1
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 5.8e-18 95.5 208 35.6
AagrBONN_evm.TU.Sc2ySwM_340.165 Anthoceros agrestis HOM05D004825 ORTHO05D005415 2.5e-13 80.1 192 28.6
Nitab4.5_0000188g0370 Nicotiana tabacum HOM05D004825 ORTHO05D005415 4.3e-13 79.3 138 37.7
Glyma.09G252466 Glycine max HOM05D004825 ORTHO05D005415 3.6e-12 76.3 81 59.3
Mapoly0072s0017 Marchantia polymorpha HOM05D004825 ORTHO05D005415 2.3e-11 73.6 218 27.1
EL10Ac6g14361 Beta vulgaris HOM05D004825 ORTHO05D005415 7.1e-08 62.0 57 56.1


User provided reference genes

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