Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 1.5e-167 592.8 302 100.0
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 5.8e-132 474.6 302 81.1
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 9.4e-106 387.5 318 65.4
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 2.2e-94 349.7 322 58.7
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 1.1e-93 347.4 321 57.9
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 8.3e-86 321.2 319 54.5
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 4.1e-85 318.9 320 54.7
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 2.7e-84 316.2 312 54.5
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 4.5e-84 315.5 319 52.4
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 1.5e-82 310.5 312 54.8
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 1.9e-82 310.1 319 53.9
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 4.2e-82 308.9 318 53.8
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 4.7e-81 305.4 318 53.1
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 4.0e-80 302.4 312 52.9
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 2.0e-79 300.1 312 52.9
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 5.7e-79 298.5 315 53.7
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 1.1e-77 294.3 319 52.0
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 3.2e-77 292.7 321 51.4
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 9.2e-77 291.2 317 52.1
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 3.5e-76 289.3 311 53.1
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 2.9e-75 286.2 318 50.3
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 8.6e-75 284.6 317 50.5
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 8.6e-75 284.6 319 51.7
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 1.1e-74 284.3 322 50.0
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 1.1e-74 284.3 309 52.4
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 2.5e-74 283.1 320 50.0
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 5.6e-74 282.0 316 50.6
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 5.6e-74 282.0 306 51.6
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 7.3e-74 281.6 316 50.0
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 1.6e-73 280.4 321 52.0
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 2.3e-72 276.6 303 51.8
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 6.8e-72 275.0 321 48.0
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 6.8e-72 275.0 387 47.0
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 8.9e-72 274.6 302 51.7
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 7.5e-71 271.6 316 49.7
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 9.8e-71 271.2 314 47.8
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.2e-70 270.0 316 49.4
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 2.2e-70 270.0 323 48.3
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 2.9e-70 269.6 302 49.7
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 3.7e-70 269.2 316 49.4
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 1.4e-69 267.3 305 50.5
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.6e-68 263.8 315 48.9
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 2.0e-68 263.5 318 50.3
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 2.7e-68 263.1 308 48.1
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.5e-68 262.7 298 51.0
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 4.6e-68 262.3 327 45.9
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 3.9e-67 259.2 313 49.8
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 5.0e-67 258.8 316 45.6
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 8.6e-67 258.1 308 49.0
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 5.6e-66 255.4 314 48.1
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 4.7e-65 252.3 311 45.3
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 1.4e-64 250.8 305 46.9
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 6.8e-64 248.4 321 45.2
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 8.9e-64 248.1 317 47.0
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 2.6e-63 246.5 311 45.7
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 2.6e-63 246.5 308 48.4
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 2.6e-63 246.5 309 47.2
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 5.8e-63 245.4 308 48.4
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 5.8e-63 245.4 320 46.2
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 5.8e-63 245.4 320 46.9
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 7.5e-63 245.0 312 46.2
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 1.3e-62 244.2 312 47.4
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 1.7e-62 243.8 312 44.9
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 1.7e-62 243.8 326 45.4
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 1.7e-62 243.8 309 47.6
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 2.2e-62 243.4 309 47.2
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 2.9e-62 243.0 311 45.0
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 4.9e-62 242.3 305 47.5
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 8.3e-62 241.5 314 43.9
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 1.4e-61 240.7 312 46.5
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 5.4e-61 238.8 323 45.5
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 9.2e-61 238.0 309 45.0
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 1.2e-60 237.7 316 44.0
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 1.6e-60 237.3 323 43.7
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 2.7e-60 236.5 311 45.0
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 3.5e-60 236.1 329 41.9
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 4.6e-60 235.7 305 43.9
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 7.8e-60 235.0 316 44.3
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 1.0e-59 234.6 325 44.0
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.3e-59 234.2 310 43.2
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 1.3e-59 234.2 336 44.3
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 2.3e-59 233.4 325 44.6
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 2.3e-59 233.4 325 44.6
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 2.3e-59 233.4 325 44.6
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 8.6e-59 231.5 306 44.8
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.1e-58 231.1 316 45.6
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 1.5e-58 230.7 300 44.0
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 1.5e-58 230.7 323 44.0
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 1.9e-58 230.3 323 43.7
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 7.3e-58 228.4 322 42.9
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 1.2e-57 227.6 305 43.9
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 3.1e-56 223.0 452 34.7
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 1.5e-55 220.7 319 41.7
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.5e-55 220.7 218 56.0
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 2.6e-55 219.9 332 42.8
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 4.4e-55 219.2 278 45.3
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 7.6e-55 218.4 321 42.1
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 1.3e-51 207.6 266 44.4
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 5.8e-47 192.2 307 41.4
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 8.4e-46 188.3 264 43.2
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 9.6e-34 148.3 252 39.3
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 1.3e-33 147.9 156 50.0
Thecc.01G125300 Theobroma cacao HOM05D005030 ORTHO05D006490 5.3e-32 142.5 247 38.9
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 8.4e-30 135.2 213 42.7
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.3e-27 127.9 405 28.4
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 6.9e-16 89.0 358 24.0
SEGI_37730 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.7e-14 84.3 283 27.2
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 3.8e-14 83.2 153 34.6
Os02g0784100 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 1.4e-13 81.3 69 59.4
Sc05g0004550 Simmondsia chinensis HOM05D005030 ORTHO05D006490 5.5e-13 79.3 86 53.5
Actinidia09824 Actinidia chinensis HOM05D005030 ORTHO05D001675 1.6e-12 77.8 82 52.4
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 4.6e-12 76.3 278 25.9
MD17G1248600 Malus domestica HOM05D005030 ORTHO05D006490 2.8e-09 67.0 75 52.0
CBR_g36665 Chara braunii HOM05D005030 ORTHO05D006490 6.9e-08 62.4 207 25.1


User provided reference genes

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