Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12831 Vaccinium macrocarpon HOM05D005288 ORTHO05D006574 2.5e-62 241.9 119 100.0
Rhsim10G0141500 Rhododendron simsii HOM05D005288 ORTHO05D006574 6.6e-55 217.2 127 87.4
Actinidia06665 Actinidia chinensis HOM05D005288 ORTHO05D006574 2.5e-54 215.3 119 87.4
DCAR_029930 Daucus carota HOM05D005288 ORTHO05D006574 2.5e-54 215.3 117 87.2
Lj4A865T28 Lonicera japonica HOM05D005288 ORTHO05D006574 4.3e-54 214.5 115 88.7
CSS0028117 Camellia sinensis var. sinensis HOM05D005288 ORTHO05D006574 9.6e-54 213.4 117 88.0
CSS0042405 Camellia sinensis var. sinensis HOM05D005288 ORTHO05D006574 9.6e-54 213.4 117 88.0
TAR628G1127 Trochodendron aralioides HOM05D005288 ORTHO05D006574 4.8e-53 211.1 115 87.0
Oeu064304.2 Olea europaea HOM05D005288 ORTHO05D006574 6.2e-53 210.7 110 91.8
Dinv09930 Davidia involucrata HOM05D005288 ORTHO05D006574 1.4e-52 209.5 115 87.0
GSVIVG01016205001 Vitis vinifera HOM05D005288 ORTHO05D006574 1.8e-52 209.1 117 85.5
CDE04G3439 Ceratophyllum demersum HOM05D005288 ORTHO05D006574 3.1e-52 208.4 118 87.3
MBI11_g07621_MAGBIO Magnolia biondii HOM05D005288 ORTHO05D006574 3.1e-52 208.4 111 89.2
QL06p051886 Quercus lobata HOM05D005288 ORTHO05D006574 3.1e-52 208.4 114 87.7
CiPaw.04G084200 Carya illinoinensis HOM05D005288 ORTHO05D006574 4.0e-52 208.0 114 88.6
Hma1.2p1_1099F.1_g256840 Hydrangea macrophylla HOM05D005288 ORTHO05D006574 6.9e-52 207.2 111 89.2
Hma1.2p1_1099F.1_g256850 Hydrangea macrophylla HOM05D005288 ORTHO05D006574 6.9e-52 207.2 111 89.2
QL02p010224 Quercus lobata HOM05D005288 ORTHO05D006574 6.9e-52 207.2 114 86.8
Aqoxy2G00112 Aquilegia oxysepala HOM05D005288 ORTHO05D006574 9.0e-52 206.8 114 87.7
Cc03_g13010 Coffea canephora HOM05D005288 ORTHO05D006574 1.5e-51 206.1 113 86.7
MBI11_g36871_MAGBIO Magnolia biondii HOM05D005288 ORTHO05D006574 1.5e-51 206.1 111 88.3
MD17G1181300 Malus domestica HOM05D005288 ORTHO05D006574 1.5e-51 206.1 114 86.0
ECA248G2357 Erigeron canadensis HOM05D005288 ORTHO05D006574 2.0e-51 205.7 113 86.7
MSTRG.23423 Avicennia marina HOM05D005288 ORTHO05D006574 2.6e-51 205.3 113 85.8
FAN11G2409 Fragaria x ananassa HOM05D005288 ORTHO05D006574 2.6e-51 205.3 114 86.0
FAN25G0340 Fragaria x ananassa HOM05D005288 ORTHO05D006574 2.6e-51 205.3 113 87.6
RcHm_v2.0_Chr5g0056641 Rosa chinensis HOM05D005288 ORTHO05D006574 2.6e-51 205.3 114 86.8
Haze_25184 Corylus avellana HOM05D005288 ORTHO05D006574 4.4e-51 204.5 114 86.8
Migut.H01124 Erythranthe guttata HOM05D005288 ORTHO05D006574 4.4e-51 204.5 108 89.8
FvH4_3g30590 Fragaria vesca HOM05D005288 ORTHO05D006574 4.4e-51 204.5 114 86.0
SGA_v2.0_scaffold146G36155 Striga asiatica HOM05D005288 ORTHO05D006574 5.8e-51 204.1 114 85.1
Os08g0310100 Oryza sativa ssp. japonica HOM05D005288 ORTHO05D006574 7.6e-51 203.8 110 88.2
Cfa002866 Carpinus fangiana HOM05D005288 ORTHO05D006574 9.9e-51 203.4 113 86.7
FAN16G1456 Fragaria x ananassa HOM05D005288 ORTHO05D006574 9.9e-51 203.4 113 86.7
FAN21G3369 Fragaria x ananassa HOM05D005288 ORTHO05D006574 1.7e-50 202.6 113 86.7
Lsat_1_v5_gn_5_89980 Lactuca sativa HOM05D005288 ORTHO05D006574 1.7e-50 202.6 108 88.9
Prupe.6G163200 Prunus persica HOM05D005288 ORTHO05D006574 2.2e-50 202.2 114 85.1
SGA_v2.0_scaffold76G25165 Striga asiatica HOM05D005288 ORTHO05D006574 2.2e-50 202.2 113 87.6
MSTRG.2688 Avicennia marina HOM05D005288 ORTHO05D006574 2.9e-50 201.8 110 88.2
Dinv05183 Davidia involucrata HOM05D005288 ORTHO05D006574 4.9e-50 201.1 130 77.7
Prupe.8G100400 Prunus persica HOM05D005288 ORTHO05D006574 4.9e-50 201.1 114 85.1
Sabra16G0006900 Salix brachista HOM05D005288 ORTHO05D006574 4.9e-50 201.1 115 85.2
Potri.001G324300 Populus trichocarpa HOM05D005288 ORTHO05D006574 6.4e-50 200.7 115 84.3
CANSAT78G2510 Cannabis sativa HOM05D005288 ORTHO05D006574 8.4e-50 200.3 110 87.3
CiPaw.03G124000 Carya illinoinensis HOM05D005288 ORTHO05D006574 8.4e-50 200.3 108 88.9
Sed0016851 Sechium edule HOM05D005288 ORTHO05D006574 8.4e-50 200.3 118 81.4
Lalb_Chr20g0108351 Lupinus albus HOM05D005288 ORTHO05D006574 1.1e-49 199.9 107 89.7
Lalb_Chr25g0284211 Lupinus albus HOM05D005288 ORTHO05D006574 1.1e-49 199.9 107 89.7
HanXRQChr17g0554451 Helianthus annuus HOM05D005288 ORTHO05D006574 1.4e-49 199.5 104 91.3
Manes.12G150400 Manihot esculenta HOM05D005288 ORTHO05D006574 1.4e-49 199.5 114 84.2
Potri.016G002400 Populus trichocarpa HOM05D005288 ORTHO05D006574 1.4e-49 199.5 115 84.3
Eucgr.I00243 Eucalyptus grandis HOM05D005288 ORTHO05D006574 2.4e-49 198.7 115 82.6
Zm00001eb129960 Zea mays HOM05D005288 ORTHO05D006574 2.4e-49 198.7 110 86.4
PSO238G0014 Papaver somniferum HOM05D005288 ORTHO05D006574 4.2e-49 198.0 122 81.1
MELO3C022914.2 Cucumis melo HOM05D005288 ORTHO05D006574 5.4e-49 197.6 107 87.9
CsaV3_5G027610 Cucumis sativus L. HOM05D005288 ORTHO05D006574 5.4e-49 197.6 107 87.9
PSO210G3075 Papaver somniferum HOM05D005288 ORTHO05D006574 5.4e-49 197.6 123 80.5
Peaxi162Scf00129g00316 Petunia axillaris HOM05D005288 ORTHO05D006574 5.4e-49 197.6 113 84.1
Oeu028499.1 Olea europaea HOM05D005288 ORTHO05D006574 1.2e-48 196.4 114 85.1
arahy.Tifrunner.gnm1.ann1.A0975M Arachis hypogaea HOM05D005288 ORTHO05D006574 1.6e-48 196.1 119 80.7
Nn1g06103 Nelumbo nucifera HOM05D005288 ORTHO05D006574 1.6e-48 196.1 114 82.5
THA.LOC104799448 Tarenaya hassleriana HOM05D005288 ORTHO05D006574 1.6e-48 196.1 113 84.1
Nitab4.5_0007636g0020 Nicotiana tabacum HOM05D005288 ORTHO05D006574 2.1e-48 195.7 113 83.2
Cpa.g.sc42.91 Carica papaya HOM05D005288 ORTHO05D006574 3.5e-48 194.9 111 85.6
COL.COLO4_33103 Corchorus olitorius HOM05D005288 ORTHO05D006574 4.6e-48 194.5 115 83.5
MBI11_g48066_MAGBIO Magnolia biondii HOM05D005288 ORTHO05D006574 6.0e-48 194.1 109 85.3
TWI79G0070 Tripterygium wilfordii HOM05D005288 ORTHO05D006574 6.0e-48 194.1 113 82.3
Lj1g0011811 Lotus japonicus HOM05D005288 ORTHO05D006574 7.9e-48 193.7 107 86.9
TWI75G0931 Tripterygium wilfordii HOM05D005288 ORTHO05D006574 7.9e-48 193.7 113 83.2
Ca_24797_v3 Cicer arietinum L. HOM05D005288 ORTHO05D006574 1.0e-47 193.4 107 86.0
Duzib052G0951 Durio zibethinus HOM05D005288 ORTHO05D006574 1.0e-47 193.4 113 83.2
arahy.Tifrunner.gnm1.ann1.MGEL7E Arachis hypogaea HOM05D005288 ORTHO05D006574 1.3e-47 193.0 125 78.4
Nitab4.5_0002064g0080 Nicotiana tabacum HOM05D005288 ORTHO05D006574 1.3e-47 193.0 113 82.3
Thecc.02G155300 Theobroma cacao HOM05D005288 ORTHO05D006574 1.7e-47 192.6 113 83.2
ATR0681G389 Amborella trichopoda HOM05D005288 ORTHO05D006574 2.3e-47 192.2 106 84.9
Ca_06746_v3 Cicer arietinum L. HOM05D005288 ORTHO05D006574 2.3e-47 192.2 107 85.0
VMungo0464G1657 Vigna mungo HOM05D005288 ORTHO05D006574 3.9e-47 191.4 107 85.0
Ah.12g062320 Amaranthus hybridus HOM05D005288 ORTHO05D006574 5.1e-47 191.0 116 79.3
A06p31470 Brassica napus HOM05D005288 ORTHO05D006574 5.1e-47 191.0 119 77.3
Gohir.A04G109416 Gossypium hirsutum HOM05D005288 ORTHO05D006574 5.1e-47 191.0 117 80.3
Sopen02g025940 Solanum pennellii HOM05D005288 ORTHO05D006574 5.1e-47 191.0 113 81.4
Carub.0008s2547 Capsella rubella HOM05D005288 ORTHO05D006574 6.6e-47 190.7 119 77.3
Phvul.005G016800 Phaseolus vulgaris HOM05D005288 ORTHO05D006574 6.6e-47 190.7 107 85.0
AL8G42090 Arabidopsis lyrata HOM05D005288 ORTHO05D006574 8.7e-47 190.3 119 77.3
Ciclev10026233m.g Citrus clementina HOM05D005288 ORTHO05D006574 8.7e-47 190.3 113 82.3
AT5G64670 Arabidopsis thaliana HOM05D005288 ORTHO05D006574 1.1e-46 189.9 119 77.3
C09p09960 Brassica napus HOM05D005288 ORTHO05D006574 1.1e-46 189.9 119 76.5
BolC9t53904H Brassica oleracea HOM05D005288 ORTHO05D006574 1.1e-46 189.9 119 76.5
Medtr1g031890 Medicago truncatula HOM05D005288 ORTHO05D006574 1.1e-46 189.9 107 84.1
Psat6g157720 Pisum sativum HOM05D005288 ORTHO05D006574 1.1e-46 189.9 107 84.1
BcaC04g23299 Brassica carinata HOM05D005288 ORTHO05D006574 1.5e-46 189.5 119 76.5
BraA06t26084Z Brassica rapa HOM05D005288 ORTHO05D006574 1.5e-46 189.5 119 76.5
BraA09t36528Z Brassica rapa HOM05D005288 ORTHO05D006574 1.5e-46 189.5 119 76.5
Glyma.15G264500 Glycine max HOM05D005288 ORTHO05D006574 1.5e-46 189.5 107 83.2
EL10As1g23109 Beta vulgaris HOM05D005288 ORTHO05D006574 1.9e-46 189.1 117 78.6
BcaC01g02699 Brassica carinata HOM05D005288 ORTHO05D006574 1.9e-46 189.1 119 76.5
C03p61490 Brassica napus HOM05D005288 ORTHO05D006574 1.9e-46 189.1 119 76.5
BolC3t18410H Brassica oleracea HOM05D005288 ORTHO05D006574 1.9e-46 189.1 119 76.5
CARHR278650 Cardamine hirsuta HOM05D005288 ORTHO05D006574 1.9e-46 189.1 120 78.3
Glyma.08G162600 Glycine max HOM05D005288 ORTHO05D006574 1.9e-46 189.1 107 83.2
unitig_27.g25064 Utricularia gibba HOM05D005288 ORTHO05D006574 1.9e-46 189.1 112 81.2
BcaB04g19983 Brassica carinata HOM05D005288 ORTHO05D006574 2.5e-46 188.7 119 75.6
Thhalv10004738m.g Eutrema salsugineum HOM05D005288 ORTHO05D006574 2.5e-46 188.7 119 76.5
Medtr1g085490 Medicago truncatula HOM05D005288 ORTHO05D006574 2.5e-46 188.7 107 83.2
Medtr4g118060 Medicago truncatula HOM05D005288 ORTHO05D006574 3.3e-46 188.3 107 83.2
PGR119G1388 Punica granatum HOM05D005288 ORTHO05D006574 3.3e-46 188.3 110 80.9
Aa31LG1G17270 Aethionema arabicum HOM05D005288 ORTHO05D006574 4.3e-46 188.0 121 76.9
BcaB02g09811 Brassica carinata HOM05D005288 ORTHO05D006574 4.3e-46 188.0 119 75.6
Gohir.D04G148800 Gossypium hirsutum HOM05D005288 ORTHO05D006574 4.3e-46 188.0 113 81.4
Sc22g0002320 Simmondsia chinensis HOM05D005288 ORTHO05D006574 4.3e-46 188.0 115 78.3
Atru.chr4.645 Acer truncatum HOM05D005288 ORTHO05D006574 7.3e-46 187.2 114 78.1
Gorai.012G135300 Gossypium raimondii HOM05D005288 ORTHO05D006574 7.3e-46 187.2 113 81.4
A09p08770 Brassica napus HOM05D005288 ORTHO05D006574 1.6e-45 186.0 114 77.2
AUR62042368 Chenopodium quinoa HOM05D005288 ORTHO05D006574 1.6e-45 186.0 117 77.8
AUR62037110 Chenopodium quinoa HOM05D005288 ORTHO05D006574 2.1e-45 185.7 117 78.6
CAN.G1681.15 Capsicum annuum HOM05D005288 ORTHO05D006574 2.8e-45 185.3 113 79.6
Sp2g27730 Schrenkiella parvula HOM05D005288 ORTHO05D006574 3.1e-44 181.8 103 82.5
Hund15173 Selenicereus undatus HOM05D005288 ORTHO05D006574 1.3e-42 176.4 111 77.5
SHI11525 Sapria himalayana HOM05D005288 ORTHO05D006574 8.4e-42 173.7 108 79.6
PGSC0003DMG400016731 Solanum tuberosum HOM05D005288 ORTHO05D006574 5.4e-41 171.0 95 85.3
Glyma.15G244400 Glycine max HOM05D005288 ORTHO05D006574 1.0e-39 166.8 92 85.9
Solyc02g081310.3 Solanum lycopersicum HOM05D005288 ORTHO05D006574 1.0e-39 166.8 95 84.2
vmacro12445 Vaccinium macrocarpon HOM05D005288 ORTHO05D006574 4.8e-37 157.9 82 93.9
CDE07G0732 Ceratophyllum demersum HOM05D002402 ORTHO05D002633 2.0e-35 152.5 89 83.1
Mapoly0020s0151 Marchantia polymorpha HOM05D005288 ORTHO05D006574 7.1e-33 144.1 106 65.1
HPP92_011348 Vanilla planifolia HOM05D005288 ORTHO05D006574 5.1e-31 137.9 81 80.2
AagrBONN_evm.TU.Sc2ySwM_344.1252 Anthoceros agrestis HOM05D005288 ORTHO05D000776 2.4e-28 129.0 93 65.6
SMO367G0866 Selaginella moellendorffii HOM05D005288 ORTHO05D006574 6.9e-28 127.5 102 61.8
Mapoly0177s0003 Marchantia polymorpha HOM05D005288 ORTHO05D006574 9.0e-28 127.1 106 58.5
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 3.4e-27 125.2 98 61.2
PRCOL_00002014 Prasinoderma coloniale HOM05D005288 ORTHO05D006574 7.4e-14 80.9 92 45.7
MCO05G392 Micromonas commoda HOM05D005288 ORTHO05D006574 7.7e-11 70.9 94 47.9
Cre11.g476800 Chlamydomonas reinhardtii HOM05D005288 ORTHO05D006574 7.2e-09 64.3 103 38.8
Cfa023704 Carpinus fangiana HOM05D005288 ORTHO05D006574 2.3e-07 59.3 71 43.7


User provided reference genes

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