Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 6.0e-132 474.2 236 100.0
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 1.9e-90 336.3 240 74.6
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 7.7e-71 271.2 248 62.5
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 1.7e-70 270.0 253 60.1
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 2.9e-70 269.2 248 62.9
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 9.4e-69 264.2 258 58.9
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 1.2e-68 263.8 257 58.4
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 3.6e-68 262.3 245 59.6
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.8e-67 260.0 258 58.1
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 1.8e-67 260.0 258 58.5
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 3.0e-67 259.2 258 56.6
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 3.9e-67 258.8 249 58.2
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 5.1e-67 258.5 258 59.3
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 8.8e-67 257.7 253 58.5
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 4.4e-66 255.4 258 57.4
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 5.7e-66 255.0 260 56.2
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 5.7e-66 255.0 254 58.7
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 1.3e-65 253.8 258 55.8
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 3.7e-65 252.3 258 56.6
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 6.3e-65 251.5 249 57.8
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 1.4e-64 250.4 258 56.6
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 1.4e-64 250.4 256 55.9
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 1.8e-64 250.0 257 55.6
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 5.3e-64 248.4 248 58.1
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 7.0e-64 248.1 258 56.6
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 2.0e-63 246.5 254 55.1
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 2.0e-63 246.5 254 55.1
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 5.9e-63 245.0 254 54.7
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 5.9e-63 245.0 254 54.7
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 5.9e-63 245.0 259 56.4
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 5.9e-63 245.0 261 55.9
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 7.7e-63 244.6 258 55.4
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 7.7e-63 244.6 254 54.7
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 7.7e-63 244.6 254 55.5
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 1.0e-62 244.2 254 56.3
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 1.3e-62 243.8 251 56.2
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 1.3e-62 243.8 260 53.1
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 1.7e-62 243.4 260 54.6
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 6.5e-62 241.5 245 56.3
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 6.5e-62 241.5 256 53.9
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 8.5e-62 241.1 258 56.2
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 1.1e-61 240.7 260 53.1
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 1.1e-61 240.7 255 54.1
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 1.5e-61 240.4 260 54.2
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 4.2e-61 238.8 255 53.3
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 7.2e-61 238.0 255 52.9
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 2.1e-60 236.5 267 51.3
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 3.6e-60 235.7 262 53.4
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 3.6e-60 235.7 256 52.7
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 8.0e-60 234.6 257 54.1
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 2.3e-59 233.0 247 55.5
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 2.3e-59 233.0 260 52.7
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 2.3e-59 233.0 260 52.7
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 3.0e-59 232.6 260 52.3
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 8.8e-59 231.1 256 52.0
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 1.5e-58 230.3 247 51.8
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 2.0e-58 229.9 245 52.7
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 2.6e-58 229.6 248 54.8
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 2.6e-58 229.6 247 53.0
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 3.3e-58 229.2 245 52.7
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 3.3e-58 229.2 248 52.8
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 2.2e-57 226.5 257 51.0
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 2.2e-57 226.5 251 53.8
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 2.8e-57 226.1 255 52.9
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 4.8e-57 225.3 244 51.2
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 2.4e-56 223.0 256 50.8
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 4.1e-56 222.2 257 49.8
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 5.3e-56 221.9 238 51.3
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 7.0e-56 221.5 238 51.3
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 1.2e-55 220.7 245 51.8
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.6e-55 220.3 245 51.8
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 1.6e-55 220.3 246 50.8
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 1.6e-55 220.3 253 51.0
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 2.0e-55 219.9 241 51.5
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 2.0e-55 219.9 251 52.6
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 4.5e-55 218.8 239 54.0
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 5.9e-55 218.4 247 51.4
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 5.9e-55 218.4 250 52.8
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 7.7e-55 218.0 251 52.2
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 1.0e-54 217.6 235 54.5
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.3e-54 217.2 238 50.4
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.7e-54 216.9 258 50.8
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 2.2e-54 216.5 251 52.2
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 2.2e-54 216.5 241 50.6
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 2.9e-54 216.1 243 51.4
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 3.8e-54 215.7 235 50.6
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 3.8e-54 215.7 242 50.0
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 6.5e-54 214.9 256 50.8
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 6.5e-54 214.9 198 59.6
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 1.1e-53 214.2 243 51.0
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 1.1e-53 214.2 243 51.0
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 1.5e-53 213.8 240 52.9
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.9e-53 213.4 236 50.4
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 4.2e-53 212.2 246 49.6
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 4.2e-53 212.2 256 50.4
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 4.2e-53 212.2 241 50.2
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 5.5e-53 211.8 245 49.8
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 5.5e-53 211.8 245 51.8
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 7.2e-53 211.5 245 51.4
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 9.4e-53 211.1 245 49.8
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 1.6e-52 210.3 178 61.2
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 2.1e-52 209.9 253 47.8
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 2.7e-52 209.5 256 48.8
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 2.7e-52 209.5 245 49.4
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 2.7e-52 209.5 245 49.4
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 2.7e-52 209.5 253 50.2
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 4.7e-52 208.8 256 48.8
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 4.7e-52 208.8 240 51.7
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 1.0e-51 207.6 244 51.2
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 1.0e-51 207.6 238 49.6
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.0e-51 207.6 253 47.4
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 1.8e-51 206.8 240 49.2
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 6.8e-51 204.9 233 48.9
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 1.2e-50 204.1 240 47.9
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 1.5e-50 203.8 240 47.9
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 2.6e-50 203.0 259 47.1
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 1.3e-49 200.7 248 48.4
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 1.3e-49 200.7 245 49.4
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 3.7e-49 199.1 242 51.7
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 4.8e-49 198.7 242 50.4
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 1.1e-48 197.6 231 49.4
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 4.1e-48 195.7 251 45.8
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 7.0e-48 194.9 247 48.6
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 2.7e-47 193.0 258 45.3
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 5.9e-47 191.8 259 48.3
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 1.0e-46 191.0 233 46.4
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 3.8e-46 189.1 251 44.2
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 3.8e-46 189.1 226 50.9
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 6.5e-46 188.3 217 47.9
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 6.5e-46 188.3 240 48.3
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 1.1e-45 187.6 240 45.4
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 1.5e-45 187.2 231 48.1
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 1.5e-45 187.2 171 56.1
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.9e-45 186.8 270 44.1
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 3.2e-45 186.0 250 46.8
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 5.5e-45 185.3 178 53.4
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 1.8e-43 180.3 170 53.5
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 3.0e-43 179.5 230 46.1
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 8.8e-43 177.9 181 51.4
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 7.5e-42 174.9 274 43.4
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 9.8e-42 174.5 199 50.3
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 2.8e-41 172.9 194 49.0
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 8.3e-41 171.4 244 43.9
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 1.6e-39 167.2 180 49.4
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 4.5e-39 165.6 214 48.1
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 7.7e-39 164.9 219 47.5
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 7.7e-39 164.9 158 51.3
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 1.3e-38 164.1 192 47.4
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 2.3e-38 163.3 166 51.2
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 2.9e-38 162.9 225 41.8
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 8.6e-38 161.4 245 42.0
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 3.3e-37 159.5 246 42.7
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 3.3e-37 159.5 245 42.0
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 4.3e-37 159.1 250 40.4
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 3.6e-36 156.0 154 54.5
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 4.7e-36 155.6 214 43.5
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 8.0e-36 154.8 251 41.0
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 1.0e-35 154.5 241 39.0
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 2.3e-35 153.3 245 40.4
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 2.3e-35 153.3 157 51.0
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 3.0e-35 152.9 95 76.8
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 5.2e-35 152.1 172 48.3
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 8.9e-35 151.4 244 41.4
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 1.2e-34 151.0 248 36.7
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 4.4e-34 149.1 248 40.7
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 1.7e-33 147.1 228 42.1
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 1.1e-32 144.4 109 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 4.6e-31 139.0 192 42.2
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 4.6e-31 139.0 242 40.1
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 4.6e-31 139.0 242 40.1
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 7.8e-31 138.3 161 46.6
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 3.9e-30 136.0 81 75.3
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 9.5e-29 131.3 238 37.4
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 2.1e-28 130.2 177 41.2
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 4.0e-27 125.9 181 45.9
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 5.0e-22 109.0 65 73.8
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 7.5e-18 95.1 54 74.1
CSS0045152 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 2.2e-17 93.6 112 52.7
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 9.2e-16 88.2 52 73.1


User provided reference genes

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