Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12659 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 2.5e-192 675.2 338 100.0
vmacro00658 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 1.3e-50 204.5 462 39.0
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-49 199.5 545 30.3
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 5.3e-49 199.1 220 53.2
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.0e-43 180.6 258 43.4
Rhsim11G0013700 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.3e-42 175.6 475 30.3
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.5e-40 171.0 264 40.5
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-39 167.5 266 41.4
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.4e-27 126.3 227 36.6
Rhsim10G0127100 Rhododendron simsii HOM05D025475 ORTHO05D000385 7.2e-22 109.0 124 53.2
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-21 108.2 128 49.2
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 9.8e-19 98.6 219 32.9
vmacro00660 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 1.2e-16 91.7 395 27.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.5e-15 85.9 191 31.4
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.6e-15 85.5 154 32.5
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 3.6e-13 80.1 226 25.2
vmacro00665 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 4.7e-13 79.7 102 44.1
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 6.1e-13 79.3 211 29.4
vmacro22505 Vaccinium macrocarpon HOM05D015585 ORTHO05D015199 6.1e-13 79.3 101 45.5
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 8.0e-13 79.0 188 28.2
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.0e-12 78.6 186 30.6
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-12 77.8 214 28.0
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-12 77.4 137 29.9
vmacro19065 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 3.0e-12 77.0 102 43.1
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 5.2e-12 76.3 209 26.3
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.2e-11 75.1 195 27.7
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.2e-11 75.1 198 28.3
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.4e-11 73.6 199 27.6
Rhsim11G0004700 Rhododendron simsii HOM05D015585 ORTHO05D000385 3.4e-11 73.6 180 28.9
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.4e-11 73.2 153 33.3
Rhsim13G0228900 Rhododendron simsii HOM05D001309 ORTHO05D000385 4.4e-11 73.2 125 32.8
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.7e-11 72.8 155 30.3
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 5.7e-11 72.8 144 31.2
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-10 71.6 151 31.1
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-10 71.2 170 30.0
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.9e-10 69.7 55 52.7
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 4.9e-10 69.7 191 23.6
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 6.3e-10 69.3 194 28.4
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.3e-10 68.9 201 23.9
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.3e-10 68.9 201 23.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-09 68.6 196 27.0
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.4e-09 68.2 175 26.9
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-09 68.2 72 45.8
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-09 68.2 55 52.7
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 2.4e-09 67.4 190 23.7
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 3.1e-09 67.0 160 29.4
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.1e-09 66.6 68 48.5
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 4.1e-09 66.6 157 27.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.4e-09 66.2 167 27.5
Atru.chr1.3691 Acer truncatum HOM05D005012 ORTHO05D005886 7.0e-09 65.9 148 25.7
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-08 65.1 155 29.7
MBI17_g42351_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-08 65.1 58 46.6
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.6e-08 64.7 173 23.7
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.7e-08 63.9 193 29.0
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.0e-07 62.0 146 28.1
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-07 62.0 55 43.6
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-07 62.0 194 24.7
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-07 62.0 194 24.7
MBI09_g41430_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-07 61.6 55 45.5
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-07 61.6 131 28.2
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-07 61.2 59 40.7
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-07 61.2 145 27.6
Rhsim02G0190200 Rhododendron simsii HOM05D025475 ORTHO05D000385 1.7e-07 61.2 96 43.8
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-07 60.8 55 43.6
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.3e-07 60.8 194 24.7
CSS0013398 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-07 60.5 67 41.8
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.9e-07 60.5 176 26.1
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 5.0e-07 59.7 219 21.5
Rhsim02G0247100 Rhododendron simsii HOM05D025475 ORTHO05D000385 5.0e-07 59.7 96 42.7
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 6.6e-07 59.3 88 31.8
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-07 59.3 142 26.8
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.6e-07 58.9 51 45.1
Prupe.1G266100 Prunus persica HOM05D005012 ORTHO05D000385 8.6e-07 58.9 66 40.9
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 8.6e-07 58.9 66 40.9
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.6e-07 58.9 205 24.9
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.1e-06 58.5 65 38.5
Rhsim03G0131200 Rhododendron simsii HOM05D025475 ORTHO05D002649 1.1e-06 58.5 62 51.6
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 1.1e-06 58.5 145 24.8
Dinv12592 Davidia involucrata HOM05D010146 ORTHO05D000385 1.5e-06 58.2 88 33.0
Dinv15672 Davidia involucrata HOM05D010146 ORTHO05D000385 1.5e-06 58.2 88 33.0
Dinv19999 Davidia involucrata HOM05D010146 ORTHO05D000385 1.5e-06 58.2 88 33.0
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.5e-06 58.2 71 39.4
vmacro23035 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 1.5e-06 58.2 137 31.4
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.9e-06 57.8 175 27.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.9e-06 57.8 175 25.7
Manes.16G033751 Manihot esculenta HOM05D001309 ORTHO05D000385 2.5e-06 57.4 170 24.1
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.3e-06 57.0 70 37.1
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 3.3e-06 57.0 70 37.1
Lsat_1_v5_gn_9_120341 Lactuca sativa HOM05D000539 ORTHO05D000233 3.3e-06 57.0 55 47.3
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-06 57.0 193 24.9
ClCG06G005780 Citrullus lanatus HOM05D001309 ORTHO05D000385 4.3e-06 56.6 146 22.6
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 4.3e-06 56.6 72 36.1
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 4.3e-06 56.6 71 38.0
PGSC0003DMG400004327 Solanum tuberosum HOM05D001309 ORTHO05D000385 4.3e-06 56.6 92 37.0
Nn7g36848 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.6e-06 56.2 55 45.5
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-06 56.2 225 23.6
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.6e-06 56.2 144 28.5
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.3e-06 55.8 159 26.4
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 7.3e-06 55.8 92 34.8


User provided reference genes

Program Settings