Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12629 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 8.6e-108 393.7 197 100.0
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 5.1e-36 155.2 85 90.6
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 3.8e-31 139.0 118 61.9
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 3.0e-28 129.4 118 58.5
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 8.8e-28 127.9 118 57.6
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 8.8e-28 127.9 118 57.6
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 8.8e-28 127.9 85 75.3
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 1.1e-27 127.5 128 53.9
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 1.5e-27 127.1 117 58.1
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 2.0e-27 126.7 89 68.5
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 2.5e-27 126.3 117 58.1
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 7.4e-27 124.8 118 55.9
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 1.7e-26 123.6 85 71.8
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 2.2e-26 123.2 85 69.4
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 2.8e-26 122.9 85 69.4
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 6.3e-26 121.7 118 55.1
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 8.2e-26 121.3 118 55.1
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 8.2e-26 121.3 89 67.4
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 1.1e-25 120.9 118 55.1
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.1e-25 120.9 85 65.9
Ciclev10020349m.g Citrus clementina HOM05D006413 ORTHO05D007722 1.4e-25 120.6 117 53.8
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 1.8e-25 120.2 84 70.2
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 2.4e-25 119.8 118 54.2
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 3.1e-25 119.4 118 53.4
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 3.1e-25 119.4 85 67.1
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 3.1e-25 119.4 119 54.6
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 4.1e-25 119.0 85 67.1
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 4.1e-25 119.0 118 54.2
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 9.1e-25 117.9 122 51.6
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 9.1e-25 117.9 85 65.9
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 9.1e-25 117.9 118 53.4
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 2.0e-24 116.7 98 58.2
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 3.4e-24 115.9 118 51.7
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 4.5e-24 115.5 118 53.4
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 4.5e-24 115.5 85 70.6
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 4.5e-24 115.5 118 52.5
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 5.9e-24 115.2 86 67.4
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 5.9e-24 115.2 117 53.0
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 7.7e-24 114.8 120 52.5
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 7.7e-24 114.8 118 52.5
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 7.7e-24 114.8 118 52.5
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 1.0e-23 114.4 122 50.8
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 1.3e-23 114.0 118 52.5
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 1.7e-23 113.6 118 52.5
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 1.7e-23 113.6 85 63.5
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 1.7e-23 113.6 118 50.0
ATR0579G174 Amborella trichopoda HOM05D006413 ORTHO05D007722 2.2e-23 113.2 86 62.8
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 3.8e-23 112.5 119 50.4
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 5.0e-23 112.1 118 53.4
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 5.0e-23 112.1 118 50.8
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 6.5e-23 111.7 84 61.9
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 1.1e-22 110.9 117 48.7
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 1.1e-22 110.9 118 52.5
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 1.4e-22 110.5 118 50.8
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.9e-22 110.2 131 48.1
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 1.9e-22 110.2 118 51.7
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 1.9e-22 110.2 85 64.7
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 2.5e-22 109.8 84 65.5
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 3.2e-22 109.4 118 50.8
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 3.2e-22 109.4 85 64.7
Hund26913 Selenicereus undatus HOM05D006413 ORTHO05D007722 3.2e-22 109.4 117 47.9
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 5.5e-22 108.6 119 52.1
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 7.2e-22 108.2 118 51.7
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 2.1e-21 106.7 86 60.5
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 2.1e-21 106.7 86 61.6
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 2.1e-21 106.7 118 50.8
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 3.6e-21 105.9 115 46.1
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 6.1e-21 105.1 89 61.8
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 6.1e-21 105.1 86 59.3
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 7.9e-21 104.8 85 61.2
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 7.9e-21 104.8 85 61.2
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 1.0e-20 104.4 85 61.2
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 1.0e-20 104.4 85 61.2
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 1.0e-20 104.4 85 61.2
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 1.4e-20 104.0 86 61.6
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 2.3e-20 103.2 86 59.3
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 3.0e-20 102.8 86 59.3
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 3.0e-20 102.8 113 51.3
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 5.1e-20 102.1 85 60.0
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 1.1e-19 100.9 119 43.7
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 1.5e-19 100.5 86 59.3
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 2.6e-19 99.8 86 60.5
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 4.4e-19 99.0 84 60.7
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 2.2e-18 96.7 117 47.0
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 5.9e-16 88.6 67 64.2
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 1.0e-15 87.8 58 70.7
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 2.9e-15 86.3 84 48.8
CiPaw.02G050800 Carya illinoinensis HOM05D006413 ORTHO05D007722 5.0e-15 85.5 91 54.9
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 1.2e-13 80.9 87 47.1
CDE12G0173 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 2.7e-13 79.7 58 65.5
Hma1.2p1_0074F.1_g038950 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 5.2e-12 75.5 92 44.6
CSS0006840 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.1e-11 74.3 44 81.8
CSS0032487 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.1e-11 74.3 44 81.8
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 3.7e-10 69.3 59 61.0
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 3.1e-09 66.2 41 68.3
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 4.1e-09 65.9 44 72.7
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 5.9e-08 62.0 56 50.0
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 1.7e-07 60.5 86 33.7
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 6.5e-07 58.5 41 65.9


User provided reference genes

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