Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 0.0e+00 1158.3 587 100.0
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 2.3e-156 556.6 592 56.2
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 9.4e-110 401.7 588 46.3
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 3.0e-92 343.6 574 42.3
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 3.0e-84 317.0 582 39.7
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 2.8e-82 310.5 502 42.4
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 2.1e-77 294.3 505 40.2
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 1.0e-76 292.0 520 39.2
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 1.4e-76 291.6 507 40.6
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 1.4e-76 291.6 534 38.4
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 2.6e-75 287.3 520 39.0
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 3.4e-75 287.0 579 38.3
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 2.9e-71 273.9 590 37.8
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 3.8e-71 273.5 585 37.4
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 1.5e-70 271.6 515 38.1
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.9e-70 271.2 583 36.9
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 3.3e-70 270.4 497 39.2
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 5.6e-70 269.6 586 37.4
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 1.2e-69 268.5 495 38.0
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 1.2e-69 268.5 495 39.6
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 1.2e-69 268.5 590 36.1
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 1.2e-69 268.5 593 36.6
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 1.0e-68 265.4 578 36.5
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.4e-68 265.0 599 37.2
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 1.4e-68 265.0 496 39.7
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 1.8e-68 264.6 599 35.6
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 3.0e-68 263.8 503 38.6
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.5e-67 261.5 584 36.0
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 5.7e-67 259.6 501 36.7
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 6.4e-66 256.1 557 35.4
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 1.1e-65 255.4 510 37.6
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 1.6e-64 251.5 495 36.4
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 1.6e-64 251.5 500 37.0
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 1.6e-64 251.5 591 34.3
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 2.7e-64 250.8 589 34.8
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 1.0e-63 248.8 506 36.8
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 1.3e-63 248.4 542 35.1
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 1.3e-63 248.4 510 35.5
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 2.3e-63 247.7 506 36.6
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 3.9e-63 246.9 497 35.4
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 8.6e-63 245.7 581 34.9
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 1.1e-62 245.4 499 36.1
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 1.6e-61 241.5 500 36.4
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 2.8e-61 240.7 594 33.2
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 6.2e-61 239.6 498 35.9
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 8.0e-61 239.2 501 34.7
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 5.2e-60 236.5 515 34.4
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 3.7e-58 230.3 513 35.7
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 1.4e-57 228.4 489 33.5
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 1.4e-57 228.4 502 34.5
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 4.1e-57 226.9 491 34.2
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 4.1e-57 226.9 492 34.3
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 7.0e-57 226.1 508 35.0
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 4.6e-56 223.4 584 33.6
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 1.7e-55 221.5 493 33.9
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 6.6e-55 219.5 525 33.3
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 6.6e-55 219.5 575 33.2
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 1.1e-54 218.8 534 32.4
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 1.1e-54 218.8 552 35.0
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 2.5e-54 217.6 530 32.8
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 2.5e-54 217.6 595 33.1
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 5.6e-54 216.5 504 33.5
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 7.3e-54 216.1 509 34.0
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 9.5e-54 215.7 525 33.1
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 1.6e-53 214.9 583 34.1
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 2.1e-53 214.5 529 32.9
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 2.8e-53 214.2 516 32.6
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 3.6e-53 213.8 584 32.5
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 6.2e-53 213.0 503 34.8
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 8.1e-53 212.6 510 34.9
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 4.0e-52 210.3 510 34.9
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 2.0e-51 208.0 540 32.8
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 2.6e-51 207.6 575 32.5
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 2.2e-50 204.5 525 32.6
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 8.3e-50 202.6 500 32.8
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 8.3e-50 202.6 465 32.0
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 3.2e-49 200.7 433 35.1
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 9.2e-49 199.1 584 32.2
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 1.2e-48 198.7 454 34.4
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 4.6e-48 196.8 527 32.8
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 7.8e-48 196.1 448 34.2
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 8.6e-47 192.6 503 32.4
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 5.6e-46 189.9 496 32.1
CSS0026125 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.6e-45 188.3 161 65.2
CSS0033391 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 6.2e-45 186.4 161 64.6
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 2.3e-44 184.5 513 32.2
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 8.9e-44 182.6 435 32.6
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 2.2e-42 177.9 531 29.4
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 3.8e-42 177.2 223 52.9
CSS0011223 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.9e-41 174.9 117 74.4
CDE12G0027 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 2.4e-41 174.5 223 49.8
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 3.2e-41 174.1 439 31.7
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 3.9e-39 167.2 284 45.8
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 2.8e-37 161.0 457 32.2
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 2.4e-36 157.9 571 27.3
Hund26914 Selenicereus undatus HOM05D006413 ORTHO05D007722 3.2e-33 147.5 254 43.3
Hma1.2p1_0074F.1_g038990 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 2.5e-30 137.9 242 43.8
Ciclev10020349m.g Citrus clementina HOM05D006413 ORTHO05D007722 8.1e-29 132.9 112 58.9
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 4.2e-25 120.6 221 38.9
CSS0016033 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.9e-22 111.7 63 88.9
CSS0017802 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.9e-22 111.7 63 88.9
Psat3g197040 Pisum sativum HOM05D006413 ORTHO05D007722 3.3e-22 110.9 149 41.6
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 7.4e-22 109.8 252 37.3
Psat5g292640 Pisum sativum HOM05D006413 ORTHO05D007722 7.1e-17 93.2 81 56.8
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 1.0e-15 89.4 229 36.7
Hund26913 Selenicereus undatus HOM05D006413 ORTHO05D007722 1.8e-15 88.6 104 45.2
Glyma.15G001000 Glycine max HOM05D006413 ORTHO05D007722 2.3e-15 88.2 49 89.8
CDE12G0173 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 1.1e-14 85.9 84 48.8
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 8.2e-13 79.7 342 26.3
Solyc03g058437.1 Solanum lycopersicum HOM05D006413 ORTHO05D007722 1.2e-11 75.9 51 76.5


User provided reference genes

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