Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 4.2e-119 431.4 226 100.0
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 1.3e-51 207.2 198 64.6
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.6e-23 113.2 195 44.1
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 3.7e-22 109.4 140 55.7
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 1.7e-19 100.5 224 38.4
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 2.5e-18 96.7 217 38.2
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 2.5e-18 96.7 141 46.8
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 9.4e-18 94.7 250 34.0
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 4.7e-17 92.4 246 36.2
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 1.0e-16 91.3 257 34.6
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 1.4e-16 90.9 166 40.4
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 3.0e-16 89.7 169 39.6
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 5.2e-16 89.0 169 40.8
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 6.8e-16 88.6 211 37.0
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 1.5e-15 87.4 185 40.0
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 2.6e-15 86.7 126 47.6
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 4.4e-15 85.9 176 38.1
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 7.5e-15 85.1 201 36.8
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 9.8e-15 84.7 215 34.0
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 9.8e-15 84.7 230 33.9
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 1.7e-14 84.0 211 35.1
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 1.7e-14 84.0 211 35.1
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 2.8e-14 83.2 170 40.6
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 6.3e-14 82.0 193 40.9
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 1.4e-13 80.9 196 38.3
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 3.1e-13 79.7 192 32.8
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 4.1e-13 79.3 131 44.3
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 5.4e-13 79.0 256 31.6
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 7.0e-13 78.6 232 35.8
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.2e-12 77.8 134 44.0
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.6e-12 77.4 134 44.0
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.6e-12 77.4 118 42.4
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 2.0e-12 77.0 214 36.0
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 2.7e-12 76.6 197 36.0
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 2.7e-12 76.6 216 31.9
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 3.5e-12 76.3 216 34.3
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 4.5e-12 75.9 226 35.0
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 7.7e-12 75.1 134 43.3
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 7.7e-12 75.1 186 34.4
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 1.0e-11 74.7 182 39.0
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 1.0e-11 74.7 121 43.0
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.3e-11 74.3 139 41.0
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.3e-11 74.3 121 43.8
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 2.9e-11 73.2 254 30.7
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 2.9e-11 73.2 179 33.5
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 5.0e-11 72.4 219 35.6
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 6.5e-11 72.0 193 34.7
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 8.5e-11 71.6 219 35.6
Cc02_g39760 Coffea canephora HOM05D007199 ORTHO05D007257 1.5e-10 70.9 100 44.0
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 1.5e-10 70.9 221 32.6
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 1.5e-10 70.9 253 29.2
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.9e-10 70.5 225 33.3
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.9e-10 70.5 225 34.2
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.9e-10 70.5 225 34.2
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 3.2e-10 69.7 252 31.3
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 3.2e-10 69.7 200 33.0
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 4.2e-10 69.3 240 32.5
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 7.2e-10 68.6 216 33.3
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 1.2e-09 67.8 241 30.7
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 1.2e-09 67.8 238 31.9
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.6e-09 67.4 225 33.3
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 1.6e-09 67.4 194 33.0
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.6e-09 66.2 127 36.2
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 3.6e-09 66.2 142 38.0
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 4.7e-09 65.9 127 36.2
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 6.1e-09 65.5 141 35.5
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 8.0e-09 65.1 193 29.0
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 1.0e-08 64.7 246 27.6
Nitab4.5_0000917g0050 Nicotiana tabacum HOM05D007199 ORTHO05D007257 1.0e-08 64.7 157 38.2
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 2.3e-08 63.5 124 41.9
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 3.0e-08 63.2 211 30.8
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 1.5e-07 60.8 90 42.2
Sc23g0001940 Simmondsia chinensis HOM05D007199 ORTHO05D007257 1.5e-07 60.8 128 36.7
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 1.5e-07 60.8 151 36.4
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 2.0e-07 60.5 134 40.3
EL10Ac7g17504 Beta vulgaris HOM05D021513 ORTHO05D007257 2.0e-07 60.5 172 36.6
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 2.0e-07 60.5 217 32.7
Gorai.008G127500 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.0e-07 60.5 95 40.0
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 2.6e-07 60.1 157 32.5
AUR62033124 Chenopodium quinoa HOM05D021513 ORTHO05D007257 4.4e-07 59.3 146 38.4
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 4.4e-07 59.3 91 41.8
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 5.7e-07 58.9 99 38.4
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 9.8e-07 58.2 238 29.8
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 9.8e-07 58.2 187 34.2
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 1.3e-06 57.8 196 32.1
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 1.7e-06 57.4 99 37.4
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 1.7e-06 57.4 156 34.6
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 2.2e-06 57.0 160 30.6
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 2.2e-06 57.0 97 43.3
ATR0620G133 Amborella trichopoda HOM05D007199 ORTHO05D007257 3.7e-06 56.2 157 35.0
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 3.7e-06 56.2 160 31.9
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 4.9e-06 55.8 195 32.3


User provided reference genes

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