Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.8e-76 289.3 156 100.0
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 1.1e-46 190.3 127 78.0
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 4.1e-36 155.2 111 75.7
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 4.5e-35 151.8 112 74.1
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.8e-34 148.7 114 72.8
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.8e-34 148.7 114 72.8
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 3.8e-34 148.7 123 65.9
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 5.0e-34 148.3 112 67.0
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 5.0e-34 148.3 108 74.1
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 1.9e-33 146.4 101 73.3
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.2e-33 145.6 114 72.8
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.2e-33 145.6 114 72.8
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 3.2e-33 145.6 110 68.2
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 4.2e-33 145.2 111 73.0
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 5.5e-33 144.8 125 64.8
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 9.4e-33 144.1 111 70.3
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 9.4e-33 144.1 115 61.7
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 1.6e-32 143.3 111 69.4
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 2.1e-32 142.9 105 71.4
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 6.1e-32 141.4 112 66.1
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 6.1e-32 141.4 109 66.1
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 7.9e-32 141.0 111 70.3
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 1.4e-31 140.2 114 68.4
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 3.0e-31 139.0 87 78.2
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 3.0e-31 139.0 125 64.0
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 3.0e-31 139.0 112 67.0
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 3.0e-31 139.0 95 74.7
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.9e-31 138.7 111 68.5
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 3.9e-31 138.7 112 66.1
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 5.1e-31 138.3 89 76.4
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 5.1e-31 138.3 94 73.4
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 8.8e-31 137.5 113 63.7
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.5e-30 136.7 94 70.2
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.5e-30 136.7 81 76.5
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.5e-30 136.7 98 71.4
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 2.0e-30 136.3 113 64.6
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 2.5e-30 136.0 114 64.9
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 2.5e-30 136.0 111 69.4
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 2.5e-30 136.0 94 69.1
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 2.5e-30 136.0 104 67.3
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 3.3e-30 135.6 111 69.4
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 3.3e-30 135.6 82 79.3
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 4.3e-30 135.2 94 72.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 5.7e-30 134.8 94 72.3
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 7.4e-30 134.4 113 65.5
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 9.7e-30 134.0 94 71.3
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.3e-29 133.7 82 79.3
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 1.7e-29 133.3 92 69.6
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 1.7e-29 133.3 92 69.6
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 1.7e-29 133.3 83 77.1
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 2.2e-29 132.9 110 65.5
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.2e-29 132.9 84 75.0
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.2e-29 132.9 98 67.3
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 2.8e-29 132.5 76 78.9
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 2.8e-29 132.5 112 58.0
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.7e-29 132.1 84 75.0
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 4.8e-29 131.7 108 63.9
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 4.8e-29 131.7 91 72.5
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 6.3e-29 131.3 76 80.3
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 1.1e-28 130.6 89 71.9
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 1.1e-28 130.6 105 68.6
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.4e-28 130.2 85 76.5
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.4e-28 130.2 95 71.6
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.4e-28 130.2 76 81.6
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.4e-28 130.2 94 70.2
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 1.8e-28 129.8 89 71.9
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 3.1e-28 129.0 76 80.3
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 4.1e-28 128.6 79 77.2
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 4.1e-28 128.6 79 77.2
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 4.1e-28 128.6 76 80.3
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 5.3e-28 128.3 75 77.3
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 5.3e-28 128.3 92 70.7
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 6.9e-28 127.9 77 80.5
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 9.1e-28 127.5 83 73.5
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 1.2e-27 127.1 105 63.8
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.6e-27 125.9 76 76.3
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 2.6e-27 125.9 110 60.9
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 3.4e-27 125.6 77 77.9
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 4.5e-27 125.2 79 75.9
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 4.5e-27 125.2 79 75.9
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 4.5e-27 125.2 95 69.5
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 4.5e-27 125.2 112 60.7
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 5.9e-27 124.8 70 80.0
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 2.9e-26 122.5 88 65.9
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 5.0e-26 121.7 87 72.4
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 8.5e-26 120.9 77 76.6
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 1.1e-25 120.6 113 57.5
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 1.4e-25 120.2 93 68.8
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 3.2e-25 119.0 92 63.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 7.2e-25 117.9 69 76.8
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 1.2e-24 117.1 72 75.0
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.4e-23 113.6 63 81.0
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 2.0e-22 109.8 69 68.1
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 3.3e-22 109.0 70 74.3
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 5.7e-22 108.2 83 61.4
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 9.7e-22 107.5 88 56.8
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.8e-20 103.2 69 69.6
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 7.0e-20 101.3 69 65.2
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 4.5e-19 98.6 76 61.8
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.9e-17 93.2 124 50.0
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 3.2e-17 92.4 78 57.7
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 7.2e-17 91.3 75 56.0
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 8.2e-13 77.8 101 46.5
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 2.6e-11 72.8 85 44.7
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 3.5e-11 72.4 53 62.3
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 1.0e-10 70.9 74 63.5
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 8.8e-07 57.8 30 80.0


User provided reference genes

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