Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 2.5e-119 432.2 223 100.0
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 1.9e-34 150.2 92 88.0
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 5.4e-26 122.1 80 81.2
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 3.9e-24 115.9 90 71.1
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 4.3e-23 112.5 92 66.3
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 5.6e-23 112.1 90 70.0
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 9.6e-23 111.3 97 62.9
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 2.1e-22 110.2 87 69.0
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 2.1e-22 110.2 89 62.9
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 3.6e-22 109.4 83 68.7
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 3.6e-22 109.4 92 59.8
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 1.1e-21 107.8 81 71.6
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 1.8e-21 107.1 95 65.3
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 1.8e-21 107.1 90 66.7
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 3.1e-21 106.3 80 66.2
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 4.0e-21 105.9 92 67.4
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 5.3e-21 105.5 90 67.8
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 5.3e-21 105.5 76 68.4
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 6.9e-21 105.1 76 69.7
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 9.0e-21 104.8 84 64.3
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 1.5e-20 104.0 93 62.4
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 2.0e-20 103.6 92 58.7
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 2.6e-20 103.2 85 65.9
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 5.8e-20 102.1 74 70.3
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 7.6e-20 101.7 88 65.9
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 1.7e-19 100.5 81 64.2
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 2.2e-19 100.1 74 71.6
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 4.9e-19 99.0 83 69.9
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 8.4e-19 98.2 86 69.8
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 1.1e-18 97.8 82 64.6
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 1.9e-18 97.1 74 68.9
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 2.4e-18 96.7 74 68.9
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 4.2e-18 95.9 90 61.1
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 4.2e-18 95.9 90 61.1
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 5.5e-18 95.5 83 68.7
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 5.5e-18 95.5 74 66.2
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 7.1e-18 95.1 83 61.4
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 7.1e-18 95.1 87 59.8
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 9.3e-18 94.7 83 60.2
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 9.3e-18 94.7 74 66.2
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 2.1e-17 93.6 74 67.6
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 2.7e-17 93.2 76 63.2
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 2.7e-17 93.2 74 67.6
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 2.7e-17 93.2 86 62.8
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 4.6e-17 92.4 89 61.8
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 4.6e-17 92.4 81 58.0
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.8e-16 90.5 100 57.0
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.8e-16 90.5 88 65.9
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 2.3e-16 90.1 91 59.3
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 2.3e-16 90.1 72 70.8
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 3.0e-16 89.7 91 59.3
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 3.0e-16 89.7 79 63.3
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 3.9e-16 89.4 68 67.6
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 6.7e-16 88.6 79 62.0
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 1.1e-15 87.8 74 62.2
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 1.5e-15 87.4 85 58.8
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 3.3e-15 86.3 72 65.3
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 4.3e-15 85.9 79 60.8
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 9.6e-15 84.7 65 66.2
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 2.1e-14 83.6 82 56.1
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 2.1e-14 83.6 69 62.3
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 4.8e-14 82.4 77 58.4
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 4.8e-14 82.4 77 58.4
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 1.1e-13 81.3 64 68.8
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 1.8e-13 80.5 59 66.1
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 1.2e-12 77.8 59 69.5
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 4.5e-12 75.9 65 66.2
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 4.5e-12 75.9 50 70.0
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 5.8e-12 75.5 59 69.5
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 2.3e-08 63.5 66 50.0
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 4.3e-07 59.3 78 51.3
MBI06_g05042_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 9.6e-07 58.2 92 30.4
QL12p035430 Quercus lobata HOM05D000001 ORTHO05D011242 2.1e-06 57.0 84 39.3
AagrBONN_evm.TU.Sc2ySwM_228.5321 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.2e-06 55.1 82 35.4


User provided reference genes

Program Settings