Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 3.8e-105 384.8 188 100.0
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 2.9e-44 182.6 86 98.8
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 4.4e-37 158.7 86 83.7
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 5.8e-37 158.3 86 84.9
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 1.1e-30 137.5 85 74.1
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 8.9e-30 134.4 139 53.2
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.5e-29 133.7 86 70.9
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 1.5e-29 133.7 86 72.1
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 2.0e-29 133.3 73 82.2
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 2.0e-29 133.3 102 64.7
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 3.4e-29 132.5 85 71.8
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 4.4e-29 132.1 86 72.1
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 9.9e-29 131.0 85 69.4
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.3e-28 130.6 97 64.9
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 1.7e-28 130.2 86 73.3
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 2.9e-28 129.4 88 70.5
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 3.8e-28 129.0 88 70.5
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 3.8e-28 129.0 88 70.5
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 3.8e-28 129.0 88 70.5
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 4.9e-28 128.6 88 69.3
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.9e-28 128.6 88 70.5
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 6.4e-28 128.3 85 68.2
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 6.4e-28 128.3 86 70.9
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 8.4e-28 127.9 88 70.5
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.1e-27 127.5 88 69.3
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.1e-27 127.5 88 69.3
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 1.1e-27 127.5 88 70.5
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 1.4e-27 127.1 88 68.2
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 1.9e-27 126.7 88 70.5
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 2.4e-27 126.3 86 65.1
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 2.4e-27 126.3 86 69.8
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 4.1e-27 125.6 88 68.2
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 7.1e-27 124.8 86 67.4
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 7.1e-27 124.8 86 68.6
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 1.6e-26 123.6 91 65.9
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 2.1e-26 123.2 89 68.5
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 2.1e-26 123.2 87 66.7
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 1.0e-25 120.9 88 65.9
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 1.0e-25 120.9 100 59.0
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 1.3e-25 120.6 88 68.2
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.7e-25 120.2 87 65.5
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 2.3e-25 119.8 89 66.3
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 1.5e-24 117.1 82 68.3
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 2.5e-24 116.3 82 68.3
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 4.3e-24 115.5 86 64.0
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 7.3e-24 114.8 88 62.5
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 9.6e-24 114.4 74 71.6
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 1.6e-23 113.6 86 60.5
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 1.6e-23 113.6 85 63.5
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 2.1e-23 113.2 89 60.7
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 2.8e-23 112.8 82 67.1
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 1.1e-22 110.9 89 60.7
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 1.1e-22 110.9 74 68.9
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 1.1e-22 110.9 80 62.5
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.1e-22 110.9 87 59.8
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 1.4e-22 110.5 86 61.6
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 1.4e-22 110.5 86 62.8
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 1.8e-22 110.2 86 61.6
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 2.4e-22 109.8 86 61.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.1e-22 109.4 87 58.6
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 3.1e-22 109.4 86 60.5
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 3.1e-22 109.4 88 61.4
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 4.0e-22 109.0 86 61.6
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 4.0e-22 109.0 104 53.8
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 4.0e-22 109.0 86 58.1
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 5.2e-22 108.6 86 59.3
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 5.2e-22 108.6 85 61.2
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 5.2e-22 108.6 85 61.2
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 6.9e-22 108.2 86 59.3
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 9.0e-22 107.8 86 61.6
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.2e-21 107.5 87 60.9
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 1.5e-21 107.1 86 59.3
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 2.0e-21 106.7 86 60.5
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 2.6e-21 106.3 88 58.0
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 2.6e-21 106.3 86 55.8
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 2.6e-21 106.3 86 59.3
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 3.4e-21 105.9 86 57.0
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 3.4e-21 105.9 86 58.1
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 4.4e-21 105.5 86 55.8
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 5.8e-21 105.1 86 55.8
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 5.8e-21 105.1 85 60.0
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 9.9e-21 104.4 86 58.1
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 9.9e-21 104.4 88 56.8
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 2.2e-20 103.2 83 59.0
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 3.8e-20 102.4 87 57.5
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 4.9e-20 102.1 86 55.8
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 8.4e-20 101.3 97 53.6
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 8.4e-20 101.3 86 53.5
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 8.4e-20 101.3 85 54.1
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 1.1e-19 100.9 86 57.0
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 7.1e-19 98.2 71 64.8
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 1.6e-18 97.1 79 64.6
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 2.7e-18 96.3 86 51.2
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 3.5e-18 95.9 57 77.2
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 6.0e-18 95.1 86 51.2
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 7.8e-18 94.7 80 61.2
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 1.0e-17 94.4 71 63.4
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 1.7e-17 93.6 85 57.6
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 2.3e-17 93.2 85 51.8
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 8.7e-17 91.3 86 50.0
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 1.1e-16 90.9 73 57.5
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 1.9e-16 90.1 82 56.1
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 5.6e-16 88.6 82 56.1
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 1.3e-15 87.4 94 48.9
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 4.8e-15 85.5 90 46.7
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 4.8e-15 85.5 55 67.3
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 8.1e-15 84.7 94 46.8
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 8.1e-15 84.7 97 46.4
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 8.1e-15 84.7 92 47.8
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 8.1e-15 84.7 91 48.4
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 1.4e-14 84.0 96 46.9
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 1.8e-14 83.6 87 47.1
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 1.8e-14 83.6 87 47.1
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 2.4e-14 83.2 99 45.5
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 4.0e-14 82.4 101 44.6
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 5.3e-14 82.0 92 45.7
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 6.9e-14 81.6 90 44.4
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 2.0e-13 80.1 93 46.2
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 2.6e-13 79.7 91 48.4
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 4.5e-13 79.0 74 51.4
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 2.2e-12 76.6 62 58.1
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 4.9e-12 75.5 92 43.5
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 1.4e-11 73.9 62 56.5
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 2.4e-11 73.2 169 33.1
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 5.4e-11 72.0 93 40.9
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 2.1e-10 70.1 75 50.7
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 1.0e-09 67.8 76 40.8
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 1.0e-09 67.8 76 40.8
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 8.7e-09 64.7 53 52.8
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 1.9e-08 63.5 46 63.0
RcHm_v2.0_Chr1g0326231 Rosa chinensis HOM05D005781 ORTHO05D006835 2.5e-08 63.2 69 50.7
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 1.3e-07 60.8 47 57.4
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 3.7e-07 59.3 47 57.4
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 6.2e-07 58.5 50 52.0
Zm00001eb318190 Zea mays HOM05D000360 ORTHO05D006835 6.9e-06 55.1 50 52.0


User provided reference genes

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