Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 0.0e+00 1127.5 579 100.0
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 1.8e-246 855.9 555 79.1
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.2e-230 801.2 564 73.4
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 6.8e-230 800.8 583 71.7
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.9e-229 797.0 564 73.0
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 2.2e-220 769.2 586 68.6
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 5.1e-217 758.1 531 72.7
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.5e-213 746.5 540 72.4
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 3.4e-213 745.3 536 72.6
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.8e-213 744.6 523 73.8
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 9.9e-213 743.8 518 72.2
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 2.4e-211 739.2 555 71.5
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 5.4e-211 738.0 543 70.0
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 7.1e-211 737.6 592 67.6
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 3.9e-209 731.9 528 74.4
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 8.7e-209 730.7 574 69.2
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 8.7e-209 730.7 592 67.2
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.1e-208 730.3 547 69.3
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.6e-207 726.5 572 68.7
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 8.1e-207 724.2 565 67.4
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 4.0e-206 721.8 443 81.5
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 1.2e-205 720.3 544 68.6
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 9.9e-205 717.2 525 71.0
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.9e-204 715.7 570 66.3
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 3.8e-204 715.3 522 71.6
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 3.8e-204 715.3 522 71.6
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 3.8e-204 715.3 431 81.4
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 1.9e-203 713.0 547 69.7
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.6e-202 709.9 536 67.5
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 4.6e-202 708.4 532 68.2
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.8e-201 706.4 564 66.5
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.8e-201 706.4 582 65.6
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 2.3e-201 706.1 590 64.6
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 3.0e-201 705.7 564 66.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 3.9e-201 705.3 541 68.8
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 5.1e-201 704.9 551 67.2
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 5.1e-201 704.9 590 64.7
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.3e-199 700.3 588 64.6
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.6e-199 699.9 527 68.5
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.1e-199 699.5 527 70.2
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 4.8e-199 698.4 430 79.5
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 1.4e-198 696.8 594 63.1
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 2.4e-198 696.0 553 65.8
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 5.3e-198 694.9 530 69.4
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 5.3e-198 694.9 491 72.7
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 2.0e-197 693.0 528 69.7
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 3.4e-197 692.2 442 77.6
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 4.5e-197 691.8 442 77.4
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.3e-196 690.3 513 69.6
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.7e-196 689.9 534 67.0
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 6.5e-196 688.0 414 81.9
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 1.4e-195 686.8 576 64.2
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 7.1e-195 684.5 535 66.9
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.6e-194 683.3 568 65.1
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 3.5e-194 682.2 503 69.0
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.0e-193 680.6 553 65.8
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 1.8e-193 679.9 526 68.4
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 2.3e-193 679.5 443 75.8
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 5.1e-193 678.3 544 66.0
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 8.7e-193 677.6 441 78.0
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.3e-191 673.7 521 67.0
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.3e-191 673.7 516 67.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 2.8e-191 672.5 561 62.7
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 3.7e-191 672.2 412 80.6
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 6.2e-191 671.4 553 64.0
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 8.2e-191 671.0 413 79.2
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.8e-190 669.8 442 74.4
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 4.1e-190 668.7 526 64.6
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.3e-190 668.3 519 66.5
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 5.3e-190 668.3 581 65.4
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 2.0e-189 666.4 524 64.1
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.6e-189 666.0 510 66.7
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.8e-189 664.8 519 66.1
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 2.9e-188 662.5 410 80.2
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.9e-188 662.5 430 76.7
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 8.4e-188 661.0 436 74.3
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 4.2e-187 658.7 565 63.5
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 4.2e-187 658.7 522 68.2
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.2e-186 657.1 579 61.8
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.2e-186 657.1 517 66.0
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.1e-186 656.4 534 65.0
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 2.1e-186 656.4 502 68.7
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.1e-186 656.4 492 68.5
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.0e-185 654.1 562 63.5
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.3e-185 653.7 421 75.5
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 2.3e-185 652.9 510 66.1
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 2.3e-185 652.9 410 78.8
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.0e-185 652.5 566 63.4
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.0e-185 652.5 551 62.8
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 3.0e-185 652.5 567 62.6
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.9e-185 652.1 544 65.1
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 8.7e-185 651.0 566 62.5
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.5e-184 650.2 525 65.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.5e-184 650.2 543 63.0
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 2.5e-184 649.4 485 68.7
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.7e-184 648.3 579 60.1
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 9.7e-184 647.5 499 68.5
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 9.7e-184 647.5 553 62.7
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 9.7e-184 647.5 571 61.8
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.6e-183 646.7 579 60.4
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.2e-183 646.4 499 66.1
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 2.8e-183 646.0 565 62.8
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 3.7e-183 645.6 557 62.8
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 8.2e-183 644.4 555 63.1
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 8.2e-183 644.4 559 63.0
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 8.2e-183 644.4 540 64.1
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.1e-182 644.0 576 61.8
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 2.4e-182 642.9 558 62.4
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 4.1e-182 642.1 577 61.0
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 6.9e-182 641.3 559 63.7
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 7.7e-181 637.9 536 63.1
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.0e-180 637.5 531 63.5
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.0e-180 637.5 429 74.8
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.8e-180 635.6 559 60.6
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 3.8e-180 635.6 437 73.2
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 5.0e-180 635.2 504 67.3
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 6.5e-180 634.8 503 67.4
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 6.5e-180 634.8 503 67.4
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 6.5e-180 634.8 503 67.4
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.4e-179 633.6 408 75.7
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 1.9e-179 633.3 442 72.6
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 1.9e-179 633.3 480 69.2
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 1.9e-179 633.3 480 69.2
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 3.2e-179 632.5 434 72.6
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 1.6e-178 630.2 441 72.3
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 2.7e-178 629.4 565 59.8
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 3.6e-178 629.0 497 68.0
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 7.4e-176 621.3 554 59.4
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.8e-174 616.7 444 70.3
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.1e-174 614.4 363 82.4
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 2.5e-171 606.3 490 68.8
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 3.2e-171 605.9 391 76.2
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 4.2e-171 605.5 589 60.1
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 1.8e-166 590.1 440 70.5
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.3e-160 569.3 565 56.5
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.5e-157 559.3 404 69.3
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 5.2e-145 518.8 443 60.0
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 2.2e-143 513.5 431 60.8
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.0e-140 504.6 346 69.9
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.4e-137 494.2 423 60.3
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.6e-130 470.7 378 64.8
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 4.7e-130 469.2 346 66.8
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.3e-129 466.8 313 70.6
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 3.6e-98 363.2 209 81.8
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 4.6e-93 346.3 403 48.4
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 3.9e-92 343.2 197 81.7
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.3e-84 318.2 333 54.1
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.6e-82 311.2 180 81.1
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.0e-79 302.0 159 85.5
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.2e-79 300.8 156 87.2
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.2e-79 300.8 156 87.2
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 3.8e-71 273.5 213 63.4
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.2e-62 243.4 386 39.9
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 7.9e-61 239.2 380 37.1
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.8e-52 211.5 158 70.9
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 3.7e-50 203.8 182 55.5
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.5e-46 191.8 127 77.2
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.0e-44 184.1 271 36.5
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.4e-43 180.3 109 80.7
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 7.5e-43 179.5 189 53.4
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.2e-34 151.4 88 76.1
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 2.2e-34 151.4 150 57.3
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.4e-33 148.7 110 64.5
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-31 142.5 83 78.3
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 1.2e-29 135.6 83 73.5
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.6e-29 135.2 100 67.0
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.1e-29 134.8 213 34.3
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 3.6e-29 134.0 130 56.2
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.9e-22 111.7 121 49.6
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 3.0e-20 104.4 100 58.0
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.4e-17 94.7 59 83.1
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 7.0e-17 93.2 169 39.6
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 4.6e-16 90.5 189 39.2
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 1.0e-15 89.4 137 40.9
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 2.8e-13 81.3 196 32.7
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 5.2e-12 77.0 111 42.3
Dinv20970 Davidia involucrata HOM05D064623 ORTHO05D179594 6.8e-12 76.6 92 47.8
Dinv21035 Davidia involucrata HOM05D064623 ORTHO05D181186 6.8e-12 76.6 92 47.8
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 4.4e-11 73.9 40 87.5
Rhsim06G0102500 Rhododendron simsii HOM05D003880 ORTHO05D339917 8.6e-07 59.7 43 72.1
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.5e-06 58.9 32 78.1


User provided reference genes

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