Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 0.0e+00 1609.7 805 100.0
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 7.1e-310 1067.0 737 78.4
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 4.4e-275 951.4 806 65.0
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 2.0e-235 819.7 775 60.0
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 4.4e-227 792.0 810 56.3
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 2.8e-189 666.4 818 50.4
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.9e-178 629.8 813 47.8
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 5.1e-167 592.4 816 44.4
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 6.9e-164 582.0 770 46.1
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 2.0e-155 553.9 795 44.2
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 1.1e-153 548.1 794 42.3
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 1.5e-150 537.7 806 43.4
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 9.1e-148 528.5 798 42.6
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 5.5e-145 519.2 804 41.4
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 6.7e-143 512.3 807 42.4
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 4.4e-142 509.6 810 42.8
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.3e-141 508.1 810 42.0
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.2e-141 507.3 811 41.6
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 7.0e-140 502.3 800 41.8
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.6e-139 501.1 810 42.8
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 2.0e-139 500.7 813 41.1
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.7e-139 500.4 805 41.5
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 7.2e-137 492.3 801 41.3
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 1.2e-136 491.5 809 40.7
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.6e-136 491.1 802 41.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.6e-136 491.1 818 41.9
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.2e-134 485.0 800 39.9
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 2.0e-134 484.2 795 40.1
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 4.4e-134 483.0 803 41.0
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 6.3e-133 479.2 801 38.3
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.4e-132 478.0 801 40.8
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.4e-132 478.0 803 40.7
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 3.1e-132 476.9 810 39.8
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 9.1e-132 475.3 803 40.5
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 1.2e-131 474.9 795 39.6
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 5.0e-130 469.5 810 40.1
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 1.9e-129 467.6 784 39.2
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.4e-127 461.5 817 39.4
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 2.8e-125 453.8 801 38.0
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 1.3e-122 444.9 554 50.0
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 3.8e-122 443.4 757 39.4
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 4.7e-120 436.4 795 38.4
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 1.8e-119 434.5 703 41.3
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 4.0e-119 433.3 803 36.4
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 8.9e-119 432.2 808 36.4
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 7.0e-116 422.5 783 37.2
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 9.2e-116 422.2 711 39.5
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 4.0e-111 406.8 796 36.1
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 8.3e-109 399.1 697 39.9
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 1.9e-108 397.9 754 35.5
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.1e-105 388.7 759 37.5
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.2e-104 385.2 802 34.9
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 2.1e-104 384.4 477 47.8
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 3.6e-104 383.6 809 35.8
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 5.8e-102 376.3 808 33.7
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 2.4e-100 370.9 807 34.6
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 2.7e-99 367.5 549 40.8
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 7.8e-99 365.9 557 40.6
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.3e-98 364.4 518 45.9
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 9.5e-97 359.0 801 34.3
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.5e-94 351.7 488 46.1
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 5.6e-89 333.2 562 39.7
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.6e-88 331.6 551 38.8
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.4e-87 327.8 803 33.1
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 4.0e-87 327.0 596 37.9
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 9.0e-87 325.9 552 38.6
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 2.4e-84 317.8 847 31.2
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 3.2e-84 317.4 579 36.8
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 2.3e-82 311.2 560 37.7
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 3.6e-80 303.9 559 37.4
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 4.8e-80 303.5 819 32.2
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.5e-78 298.5 829 31.7
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 2.9e-77 294.3 803 31.4
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 3.8e-77 293.9 810 32.8
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 4.9e-77 293.5 809 32.0
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 4.9e-77 293.5 806 32.8
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 4.9e-77 293.5 806 32.8
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 2.1e-75 288.1 645 33.2
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 2.7e-75 287.7 764 31.3
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 1.9e-73 281.6 810 30.5
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 1.8e-71 275.0 543 34.4
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 2.6e-70 271.2 545 34.3
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 3.4e-70 270.8 576 35.2
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 4.5e-70 270.4 820 30.5
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 5.8e-70 270.0 540 34.1
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 5.5e-68 263.5 795 30.7
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 2.1e-67 261.5 828 30.1
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 7.4e-65 253.1 400 38.5
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 2.2e-61 241.5 802 29.3
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 4.6e-59 233.8 817 29.3
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 7.9e-59 233.0 685 30.9
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 1.3e-58 232.3 801 29.8
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 2.2e-56 224.9 814 29.2
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 1.3e-53 215.7 788 28.4
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 4.2e-52 210.7 574 31.5
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 6.3e-48 196.8 569 29.9
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 7.7e-46 189.9 413 34.4
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.4e-44 185.7 400 33.0
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 1.4e-39 169.1 334 35.6
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.3e-34 151.8 546 25.3
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 4.1e-31 141.0 794 26.4
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 1.3e-24 119.4 102 61.8
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 9.1e-23 113.2 137 49.6
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 2.7e-22 111.7 564 25.0
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 1.1e-20 106.3 379 29.0
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 1.4e-18 99.4 304 30.3
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 4.0e-18 97.8 161 36.6
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 1.2e-14 86.3 128 43.0
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 2.7e-14 85.1 138 40.6
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 3.6e-11 74.7 166 33.7
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 2.0e-09 68.9 68 48.5
Aqoxy1G01188 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 4.1e-07 61.2 116 39.7
RcHm_v2.0_Chr5g0040361 Rosa chinensis HOM05D006728 ORTHO05D007911 5.9e-06 57.4 95 42.1


User provided reference genes

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