Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 2.7e-38 161.4 74 100.0
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 4.3e-20 100.9 46 91.3
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 9.6e-20 99.8 46 89.1
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 6.2e-19 97.1 46 93.5
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.4e-18 95.9 46 91.3
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.4e-18 95.9 46 91.3
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.8e-18 95.5 46 91.3
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.8e-18 95.5 46 91.3
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.8e-18 95.5 46 91.3
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 2.4e-18 95.1 46 91.3
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.4e-18 95.1 46 91.3
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 2.4e-18 95.1 46 91.3
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.4e-18 95.1 46 91.3
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.1e-18 94.7 46 91.3
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 3.1e-18 94.7 46 91.3
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 3.1e-18 94.7 46 91.3
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 4.0e-18 94.4 46 89.1
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 4.0e-18 94.4 46 89.1
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.0e-18 94.4 46 89.1
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 4.0e-18 94.4 46 89.1
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 4.0e-18 94.4 46 89.1
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 5.3e-18 94.0 46 89.1
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 5.3e-18 94.0 46 89.1
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 5.3e-18 94.0 46 89.1
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 5.3e-18 94.0 46 89.1
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 6.9e-18 93.6 46 89.1
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 6.9e-18 93.6 46 89.1
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 6.9e-18 93.6 46 89.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 9.0e-18 93.2 55 80.0
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.0e-18 93.2 46 87.0
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.2e-17 92.8 46 87.0
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.2e-17 92.8 46 87.0
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.2e-17 92.8 46 89.1
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.5e-17 92.4 46 84.8
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.5e-17 92.4 46 87.0
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.5e-17 92.4 46 87.0
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.5e-17 92.4 46 87.0
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.5e-17 92.4 46 87.0
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.5e-17 92.4 46 89.1
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 2.0e-17 92.0 46 84.8
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.0e-17 92.0 46 87.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 2.0e-17 92.0 46 87.0
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.6e-17 91.7 46 84.8
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.6e-17 91.7 46 84.8
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 2.6e-17 91.7 46 84.8
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 2.6e-17 91.7 46 84.8
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 2.6e-17 91.7 46 84.8
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 2.6e-17 91.7 46 87.0
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 3.4e-17 91.3 45 84.4
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 4.5e-17 90.9 46 84.8
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 4.5e-17 90.9 46 82.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 9.9e-17 89.7 44 84.1
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 1.3e-16 89.4 45 84.4
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.3e-16 89.4 46 80.4
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 6.4e-16 87.0 46 82.6
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 5.1e-13 77.4 46 78.3
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 2.5e-12 75.1 34 82.4
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.5e-12 75.1 34 82.4
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.5e-12 75.1 34 82.4
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 4.8e-11 70.9 46 71.7
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 1.8e-10 68.9 46 69.6
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 4.0e-10 67.8 46 69.6
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 4.0e-10 67.8 46 69.6
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.0e-09 65.5 46 67.4
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 5.8e-09 63.9 46 67.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.2e-08 62.0 46 65.2
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 4.9e-08 60.8 46 63.0
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 4.9e-08 60.8 46 63.0
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 1.4e-07 59.3 47 61.7
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 3.2e-07 58.2 46 60.9
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 7.1e-07 57.0 31 80.6
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 7.1e-07 57.0 46 65.2
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 7.1e-07 57.0 46 65.2
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.2e-06 56.2 46 63.0
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.6e-06 55.8 46 63.0
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 3.5e-06 54.7 46 63.0
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 7.9e-06 53.5 46 60.9


User provided reference genes

Program Settings