Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-95 353.6 253 100.0
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.5e-35 153.3 216 63.4
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.1e-19 101.3 89 62.9
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 5.6e-19 99.0 96 76.0
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 7.3e-19 98.6 97 71.1
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 8.1e-18 95.1 142 56.3
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.4e-17 93.6 89 58.4
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.4e-17 93.6 102 67.6
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 4.0e-17 92.8 142 54.9
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 2.0e-16 90.5 99 68.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.0e-16 90.5 97 70.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.4e-16 89.4 93 66.7
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 4.4e-16 89.4 88 76.1
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 7.6e-16 88.6 117 59.0
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.6e-16 88.6 105 54.3
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.9e-16 88.2 119 47.9
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 9.9e-16 88.2 100 69.0
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.7e-15 87.4 87 71.3
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.8e-15 86.3 89 61.8
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 4.9e-15 85.9 118 62.7
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 4.9e-15 85.9 111 63.1
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.9e-15 85.9 94 70.2
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.9e-15 85.9 96 67.7
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 6.4e-15 85.5 151 52.3
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.1e-14 84.7 119 60.5
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.1e-14 84.7 84 52.4
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.4e-14 84.3 118 55.9
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-14 84.0 80 57.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 2.4e-14 83.6 95 54.7
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.1e-14 82.8 90 70.0
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.1e-14 82.8 90 70.0
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.4e-14 82.4 90 65.6
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.1e-14 82.0 89 59.6
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 9.2e-14 81.6 117 48.7
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 9.2e-14 81.6 72 59.7
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.2e-13 81.3 54 68.5
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.6e-13 80.9 112 59.8
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.1e-13 80.5 119 60.5
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 2.1e-13 80.5 86 65.1
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.1e-13 80.5 85 51.8
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.7e-13 80.1 97 64.9
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 2.7e-13 80.1 97 64.9
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.5e-13 79.7 57 73.7
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.5e-13 79.7 54 70.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 3.5e-13 79.7 92 53.3
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 4.6e-13 79.3 55 72.7
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 4.6e-13 79.3 52 71.2
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.0e-13 79.0 84 56.0
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.3e-12 77.8 258 46.1
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.0e-12 76.6 57 66.7
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 3.9e-12 76.3 49 69.4
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 5.1e-12 75.9 45 73.3
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 5.1e-12 75.9 119 54.6
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 8.7e-12 75.1 51 64.7
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 8.7e-12 75.1 147 40.8
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.7e-12 75.1 93 66.7
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.1e-11 74.7 260 43.1
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.1e-11 74.7 47 74.5
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.5e-11 74.3 94 66.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-11 74.3 117 52.1
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.5e-11 74.3 76 57.9
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.5e-11 74.3 111 55.9
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.5e-11 74.3 86 65.1
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.5e-11 74.3 97 61.9
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.9e-11 73.9 73 54.8
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.9e-11 73.9 50 72.0
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.5e-11 73.6 85 67.1
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.3e-11 73.2 115 51.3
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 5.6e-11 72.4 111 60.4
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 5.6e-11 72.4 146 45.9
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.6e-11 72.4 96 58.3
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.6e-11 71.6 83 51.8
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.2e-10 71.2 95 63.2
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.2e-10 71.2 78 71.8
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.2e-10 71.2 88 51.1
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.6e-10 70.9 88 64.8
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 1.6e-10 70.9 93 46.2
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.6e-10 70.9 46 71.7
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.8e-10 70.1 135 51.9
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.6e-10 69.7 109 58.7
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 3.6e-10 69.7 260 36.2
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 4.7e-10 69.3 77 50.6
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 6.2e-10 68.9 52 65.4
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 8.1e-10 68.6 262 37.0
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.1e-09 68.2 97 61.9
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 1.1e-09 68.2 117 42.7
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 1.4e-09 67.8 122 50.0
SMO351G0439 Selaginella moellendorffii HOM05D002879 ORTHO05D002930 1.4e-09 67.8 83 66.3
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.8e-09 67.4 50 60.0
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.8e-09 67.4 89 46.1
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-09 67.4 43 72.1
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.4e-09 67.0 116 52.6
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.1e-09 66.6 54 59.3
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 3.1e-09 66.6 100 63.0
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-09 66.2 98 45.9
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.0e-09 66.2 135 43.7
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 4.0e-09 66.2 96 61.5
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.0e-09 66.2 73 49.3
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.2e-09 65.9 48 68.8
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 5.2e-09 65.9 109 59.6
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 9.0e-09 65.1 104 58.7
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 9.0e-09 65.1 104 42.3
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.0e-09 65.1 47 63.8
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.0e-09 65.1 54 59.3
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 9.0e-09 65.1 122 38.5
Os01g0963600 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 9.0e-09 65.1 48 60.4
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 9.0e-09 65.1 63 74.6
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 9.0e-09 65.1 115 50.4
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 1.2e-08 64.7 118 52.5
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 1.2e-08 64.7 85 60.0
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.0e-08 63.9 85 48.2
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 2.6e-08 63.5 72 65.3
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 2.6e-08 63.5 108 54.6
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.4e-08 63.2 72 51.4
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.4e-08 63.2 116 50.9
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.4e-08 62.8 47 61.7
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.8e-08 62.4 91 61.5
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.8e-08 62.4 91 61.5
TAR381G1351 Trochodendron aralioides HOM05D002879 ORTHO05D002930 5.8e-08 62.4 119 52.1
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 5.8e-08 62.4 63 50.8
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 9.9e-08 61.6 71 49.3
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 9.9e-08 61.6 44 65.9
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.3e-07 61.2 43 69.8
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.3e-07 61.2 116 50.9
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.7e-07 60.8 49 59.2
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.7e-07 60.8 145 44.8
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.7e-07 60.8 74 47.3
PGR044G2207 Punica granatum HOM05D002879 ORTHO05D002930 2.2e-07 60.5 147 42.2
QL02p038867 Quercus lobata HOM05D002879 ORTHO05D002930 2.2e-07 60.5 153 45.8
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-07 60.5 114 49.1
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 2.2e-07 60.5 77 70.1
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 2.9e-07 60.1 81 53.1
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 3.8e-07 59.7 95 55.8
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.8e-07 59.7 89 61.8
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 3.8e-07 59.7 86 45.3
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.8e-07 59.7 71 49.3
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 4.9e-07 59.3 64 56.2
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.4e-07 58.9 46 58.7
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.4e-07 58.9 46 58.7
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.4e-07 58.9 54 55.6
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 8.4e-07 58.5 89 57.3
SalBow7G0277 Salvia bowleyana HOM05D058840 ORTHO05D002930 8.4e-07 58.5 88 63.6
SalBow7G2213 Salvia bowleyana HOM05D058840 ORTHO05D002930 8.4e-07 58.5 88 63.6
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.1e-06 58.2 47 61.7
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 57.8 71 47.9
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 57.8 71 47.9
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 57.8 71 47.9
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 1.4e-06 57.8 147 40.8
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-06 57.8 43 65.1
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-06 57.4 46 58.7
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.4e-06 57.0 259 43.6
SEGI_17221 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.2e-06 56.6 44 59.1
unitig_747.g21665 Utricularia gibba HOM05D002879 ORTHO05D002930 3.2e-06 56.6 44 59.1
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 4.2e-06 56.2 116 47.4
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.2e-06 56.2 54 51.9
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.2e-06 56.2 136 43.4
Glyma.16G166600 Glycine max HOM05D002879 ORTHO05D002930 7.1e-06 55.5 88 55.7
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 7.1e-06 55.5 54 51.9
Os11g0167800 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 7.1e-06 55.5 87 62.1
Prupe.8G034200 Prunus persica HOM05D002879 ORTHO05D002930 7.1e-06 55.5 69 72.5
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.1e-06 55.5 71 46.5
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 7.1e-06 55.5 47 61.7
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 9.3e-06 55.1 64 54.7


User provided reference genes

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